|
[+] Show/hide bicluster #494 rows and columns.
bicluster 494
Mycobacterium tuberculosis H37Rv
7x238
[+] Show/hide bicluster #494 rows (genes).
bicluster 494 genes
Mycobacterium tuberculosis H37Rv
7
[+] Show/hide bicluster #494 rows (short gene names).
bicluster 494 short names
Mycobacterium tuberculosis H37Rv
7
short_name
[+] Show/hide bicluster #494 rows (long gene names).
bicluster 494 long names
Mycobacterium tuberculosis H37Rv
7
long_name
[+] Show/hide bicluster #494 rows (NCBI RefSeq gene IDs).
bicluster 494 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #494 gene upstream sequences.
bicluster 494 upstream sequences
Mycobacterium tuberculosis H37Rv
7
upstream
[+] Show/hide bicluster #494 columns (arrays; conditions).
bicluster 494 arrays
Mycobacterium tuberculosis H37Rv
238
[+] Show/hide bicluster #494 ratios.
bicluster 494 ratios
Mycobacterium tuberculosis H37Rv
7x238
GENES 2867:::H37Ra..7H9.shake.replicate.3 2867:::H37Ra..Dubos.media.replicate.1 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Ra..Youman.media.replicate.2 2885:::H37Ra..7H9.roll.replicate.2 2885:::Strain.1006...replicate.1 2885:::Strain.1254...replicate.4 2885:::Strain.3160...replicate.3 2885:::Strain.3160..replicate.1 2885:::Strain.9700665..replicate.3 2885:::Strain.9800608..replicate.1 2885:::Strain.9800608..replicate.4 4055:::H37Rv.Vs.M.bovis.rep4 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.4 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4 4084:::High.iron.wt.vs.high.iron.ideR.KO.1b 4084:::High.iron.wt.vs.low.iron.wt.2a 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4100:::H37Rv.0.2..Oxygen..2h..2 4101:::NRP.Day14..3 4107:::DIPED..100ug.mL..DMSO..12h..3 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::pH4.8vspH6.8..2h. 4107:::pH4.8vspH6.8..4h.B 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..10ug.mL..DMSO..12h..1 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.BZA.pH5.6..4h..2 4107:::X0.12mg.mL.PZAvspH5.6..6h.A 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.4mM.NaN3vsDMSO..4h.A 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X1.2mg.mL.PZAvspH5.6..6h. 4107:::X100uM.DCCD.DMSO..6h 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.EMBvsDMSO..6h 4107:::X10ug.mL.Nvb.DMSO..6h..2 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.PA.21vsDMSO..6hA 4107:::X12.5ug.mL.AntimycinvsDMSO..6h 4107:::X130ug.mL.TLMvsDMSO..6hA 4107:::X13ug.mL.clfzine.DMSO..6h..1 4107:::X150uM.Deferroxaminevsctrl..6hA 4107:::X1ug.mL..59vsDMSO..6h 4107:::X1ug.mL..59vsDMSO..6hA 4107:::X25ug.mL.CPZvsDMSO..6h.B 4107:::X25ug.mLCPZ.0.1mMGSNOvsDMSO.A 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X50ug.mL.TriclosanvsEtOH..6h 4107:::X50ug.mLAntimycinAvsDMSO..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2 4107:::X5ug.mLCFZ.0.1mMGSNOvsDMSO.A 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.7.day.rep.6 4364:::H37dosR.mutant.hypoxia.1.day.rep.5 4364:::H37dosR.mutant.hypoxia.1.day.rep.6 4364:::H37dosR.mutant.hypoxia.8hr.rep.2 4365:::H37Rv.diamide.1h.rep.1 4365:::H37Rv.diamide.1h.rep.2 4365:::H37Rv.diamide.1h.rep.4 4365:::H37Rv.diamide.1h.rep.6 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4575:::Extracted.Lung.Surfactant.2hrs.rep.1 4575:::Extracted.Lung.Surfactant.30min.rep.2 4575:::Whole.Lung.Surfactant.2hrs.rep.2 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.2 4615:::AA_10uM_10min_01 4615:::AA_30uM_10.min_04 4615:::AA_30uM_10min_02 4615:::AA_30uM_1h_01 4615:::AA_30uM_1h_02 4615:::AA_30uM_24h_T0_01 4615:::AA_30uM_2h_06 4615:::AA_30uM_30min_02 4615:::AA_30uM_30min_04 4615:::AA_30uM_4h_01 4615:::AA_30uM_4h_03 4615:::aceatate.induction.1 4615:::CK_OA_NA_0.05_2h 4615:::CK.2.2h.for.OA.NA.and.PA.NA 4615:::CK.4h.for.AA.NA.0.03mM 4615:::CK.for.MDG.OA.4h 4615:::CK.MDG.AA.Na.2h 4615:::ETYA_30uM_10min.02 4615:::L2A_30uM_10min_01 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_1h_05 4615:::LAA_50uM_10min_02 4615:::MDA_1254.pMV261_03 4615:::MDA_1254.pMV261.3524_03 4615:::MDA_1254.pMV261.3524_04 4615:::MDG_1254.pMV261.3524_01 4615:::MTB1254_Bottom_10D_04 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_Bottom_42D_01 4615:::MTB1254_Bottom_42D_02 4615:::MTB1254_FA5_10min_02 4615:::MTB1254_Pellicle_10D_01 4615:::MTB1254_Pellicle_10D_02 4615:::MTB1254_Pellicle_10D_03 4615:::MTB1254_Pellicle_14D_01 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.0485.1._PA_10m_01 4615:::MTB1254.0485.1._PA_10m_03 4615:::MTB1254.3524.1._OA_10min_03 4615:::MTB1254.3524.1._OA_10min_04 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB889_PA50_1h_02 4615:::OA_100uM_2h_T0_01 4615:::OA_50uM_1h_10 4615:::OA_50uM_30min_06 4615:::OA_50uM_4h_04 4615:::PA_100uM_24h_T0_01 4615:::PA_100uM_2h_03 4615:::PA_100uM_2h_T0_02 4615:::PA_50uM_1h_04 4615:::PA_50uM_24h_03 4615:::PA_50uM_24h.PA_50uM_1h_01 4615:::PA_50uM_4h 4615:::PA_50uM_4h_04 4615:::PA_50uM_4h_05 4615:::PA_50uM_4h_06 4615:::PA_50uM.AA_30uM_2h_04 4615:::PA_50uM.OA_30uM_30min_01 4615:::PA_5uM_10.min_01 4615:::Rv_OA30_30mim_01 4615:::Rv_TA_OA30_30mim_03 4615:::Rv.pMV0481.1. 4615:::Rv3524.1_OA_10min 4615:::Starvation_1254_24h_05 4615:::Starvation_1254_6h_04 4615:::Starvation_1254_OA50_5d_03 4615:::Starvation_1254_PA50_24h_04 4615:::Starvation_OA50_6h_01 4615:::TBD098 4615:::TBD1113 4615:::TBD1116 4615:::TBD1268 4615:::TBD664 4615:::TBE056 4615:::TBE059 4615:::Test_261B4.1 4615:::Tet_100uM_30M_01 4615:::WM_1254_10d_01 4615:::WM_1254.whiB4._14d_01 4615:::X7h9.control.4h 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2 4703:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4731:::X10ug.ml.capreomycin.vs.Ethanol..6hrs 4731:::X5ug.ml.Rifampicin.vs.DMSO.2.5hrs 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.1 4815:::H37Rv.reaeration.for.24hrs.rep.4 4815:::H37Rv.reaeration.for.6hrs.rep.2 4928:::Mtb.Erdman.strain.20.ppm.CO.rep.2 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.2 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2 Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages.for.24hrs
RV0075 NA 0.75 0.3 0 -0.501544410892853 0.743669298910092 0.259419522875614 NA -0.674490759476595 -0.674490759476595 0.743669298910092 NA NA -0.958486868729898 0.922987355073235 0.709990273133258 NA -0.496993191193281 -0.141998054626652 -1.2424829779832 -0.922987355073235 -0.887487841416573 -2.66246352424972 -0.425994163879955 -1.70397665551982 2.44946644230974 -1.41998054626652 -0.603491732163269 0.354995136566629 0.496993191193281 0.390494650223292 -0.354995136566629 NA NA NA NA NA NA NA 0.882026377777086 -0.0518839045751226 0.233477570588052 0.622606854901472 -0.700432711764156 0.103767809150246 0.155651713725368 1.39113719142048 -0.466955141176104 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.285925430647687 -0.0366571064932932 -0.32940246393043 -0.266659137467491 -0.643119096245126 NA NA NA NA -2.11340437969333 1.25904941768964 -0.269796303790637 NA NA -1.37675466787282 -0.353115750549512 -1.5910046738242 0.578134936694224 0 0.529957025303039 0 -1.25262569617082 0.385423291129483 NA NA NA NA NA 0.23185619857008 NA -0.990658302981249 -0.23185619857008 0.674490759476595 NA -1.1592809928504 -1.32790368271955 NA -0.337245379738298 -1.93916093349521 NA 0.29508970727101 1.18035882908404 NA 1.70730473492513 1.4965263725887 NA 2.10778362336436 0.653412923242952 -0.210778362336436 -1.13820315661675 -0.0632335087009307 0.23185619857008 0.484790233373803 0.210778362336436 0.548023742074734 0.75880210441117 0.484790233373803 1.3068258464859 0.316167543504654 -0.0843113449345744 -0.168622689869149 0.906346958046675 0.548023742074734 -0.674490759476595 -1.20143666531769 -0.927424794280318 -2.23425064076622 -0.632335087009308 -1.81269391609335 -2.14993929583165 0.548023742074734 -2.3185619857008 NA NA -0.442634560906516 NA 1.60191555375691 -0.126467017401862 0.379401052205585 1.26467017401862 NA NA 1.6440712262242 1.28574801025226 0.695568595710239 -0.52694590584109 -0.590179414542021 NA NA -0.632335087009308 -0.52694590584109 -0.611257250775665 1.1592809928504 0.52694590584109 2.38179549440173 0.168622689869149 NA -2.08670578713072 0.0421556724672872 -0.0632335087009307 1.41221502765412 1.47544853635505 1.24359233778497 1.39113719142048 -0.0210778362336436 0.505868069607446 -0.442634560906516 -0.737724268177526 NA -0.497294034529354 -3.9220388606602 -0.0416352320664565 1.21737356588459 -0.32901988267151 1.38188350722034 -0.921255671480228 0.843113449345744 -0.00991898175700875 0.41295352621016 0.578134936694224 2.11982810121216 -0.0550604701613547 -0.110120940322709 -1.87205598548606 0.715786112097611 -0.82590705242032 NA NA NA -0.539592607581276 0.584558658213049 0.87287039461677 NA -0.674490759476595 NA NA 0.674490759476595 0.60157283953318 NA NA -0.674490759476595 -0.283771265 0 1.57381177211206
RV0077C NA 0.841031687742421 -0.024981139239874 -0.607874388170265 0.0160593037970622 0.0160593037970622 -0.305126772144174 NA -0.0160593037970614 -0.433601202520668 2.00741297463272 NA 1.91725326118938 -0.955528575925177 0.112415126579432 -0.786905886056028 NA -0.730698322766312 0.786905886056028 0.674490759476595 -1.15225504743918 0.224830253158865 0.533971851252305 -0.393452943028014 -0.44966050631773 1.01173613921489 -0.309141598093439 0.112415126579432 0.393452943028014 -0.393452943028014 0.112415126579432 0.0562075632897162 -0.75 -0.25 0.0408782278470664 NA NA NA NA 0.388343164547131 -0.204391139235332 -0.44966050631773 0.367904050623597 -0.0817564556941327 -0.408782278470664 1.49205531641792 0.353304683535359 0.103767809150245 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.833745522130791 0.355981234168203 0.97867286669153 -0.81996915857939 0.7935185405607 -0.45 -0.6 0.45 0 -0.44966050631773 -0.112415126579433 -0.599547341756974 -0.981077468329593 0.367904050623597 0.0913372903457889 -0.400478888439228 -2.33963982193444 0.29508970727101 0.463712397140159 0 -0.800957776878457 -0.969580466747606 0.463712397140159 1.04239481010019 1.70666601261502 -0.643832088591295 1.06283392402373 NA 0.261093197216747 NA -0.478670861564035 0.239335430782018 -0.19581989791256 1.67534801547412 -0.261093197216747 -1.283708219649 NA 0.500428627998764 -3.04608730086204 NA 0.0217577664347289 0.348124262955662 NA 0.78327959165024 1.21843492034482 NA 1.00085725599753 -0.108788832173644 -0.217577664347289 -1.54480141686575 -0.152304365043102 -0.217577664347289 -0.108788832173644 -0.0652732993041866 0.456913095129306 -0.0870310657389155 1.74062131477831 2.48038537355909 0.674490759476595 -0.805037358084968 -0.761521825215511 0.152304365043102 -0.0217577664347289 -0.500428627998764 -0.58745969373768 -0.0652732993041866 -3.39421156381771 -0.282850963651475 -0.913826190258613 -0.217577664347289 0.674490759476595 -0.19581989791256 NA 1.54480141686575 -1.9581989791256 1.43601258469211 2.54565867286328 0.413397562259849 -0.913826190258613 2.08874557773397 -0.979099489562799 0.78327959165024 2.69796303790638 1.89292567982141 1.06613055530172 -0.522186394433493 -0.805037358084968 -0.478670861564035 NA -0.848552890954426 -0.696248525911324 -2.34983877495072 3.04608730086204 1.71886354834358 1.24019268677955 0.500428627998764 -0.957341723128071 -0.848552890954426 0.0870310657389155 0.282850963651475 0.696248525911324 0.108788832173644 0.58745969373768 0.239335430782018 -0.565701927302951 1.19667715391009 1.30546598608373 1.50128588399629 2.21929217634235 0.638991245819932 -1.202580423873 -0.773834359709582 1.06133104799994 -0.783599558803691 1.91436347910269 -0.664571777719586 1.24406073414572 -0.254807620246714 0.700941377495285 -0.013225309009345 2.10282413248586 0.224830253158865 0.436435197308385 -1.9970216604111 1.9970216604111 0.780293231551355 NA 0.729391170131667 -0.674490759476595 0.3 0.2 1.29938661016815 4.12788344799676 -1.94253338729259 NA NA 0.292279329106525 0.637019050616784 NA NA -0.674490759476595 -1.61448823097894 0.692541120007583 2.24830253158865
RV0078 -1.11437603739611 0.293256851946346 1.73021542648344 1.14370172259075 -1.92127670881212 1.02195569617666 0.613173417705996 -1.34898151895319 -0.531416962011863 -0.327025822776531 -0.122634683541199 NA 0.865764258432645 -0.738727974664842 -0.224830253158865 1.7665234176768 -0.256948860752989 -0.546016329100101 -0.802965189853089 -0.417541898723606 -1.54169316451793 -0.481779113911854 -1.44533734173556 -0.385423291129483 -1.7665234176768 1.25262569617082 -0.44966050631773 -0.642372151882472 0.192711645564742 0.738727974664842 1.31686291135907 0.321186075941236 NA NA 1.18710373667881 1.51085930122757 0.512612977202212 1.59179819236477 0.91730743288817 1.32200188857413 -0.269796303790638 1.07918521516255 -0.107918521516255 -1.94253338729259 -0.21583704303251 0.269796303790638 -0.05 0.674490759476595 -0.160593037970618 -0.80296518985309 -0.80296518985309 -0.642372151882472 0.674490759476595 0.0321186075941236 -0.610253544288348 -0.160593037970618 0.513897721505977 -0.289067468347112 NA 0.0321186075941236 1.41321873414144 -0.513897721505977 -2.21618392399453 -2.1840653164004 -1.99135367083566 -1.6380489873003 -1.0920326582002 0.0963558227823707 1.73440481008267 1.05991405060608 1.25262569617082 -0.353304683535359 3.88635151888895 0.160593037970618 0.835083797447213 0.128474430376494 -1.73440481008267 -0.674490759476595 0.481779113911854 0.642372151882472 -1.15626987338845 -0.546016329100101 0.192711645564741 0.513897721505977 0.738727974664842 NA -0.546016329100101 -1.44533734173556 1.34898151895319 0.610253544288348 0.642372151882472 1.12415126579433 -0.289067468347112 -1.57381177211206 0.16237740505918 0.61203791137691 -0.878881898711927 -0.592734303782463 -0.674490759476595 -0.55 0.5 1.7 1.2 NA NA NA -0.375 0.825 0.595138905420525 -0.198379635140175 -4.6420834622801 -0.464649189861655 0.734445493652293 0.584558658213049 0.134898151895319 -0.584558658213049 -0.0149886835439244 0.7935185405607 0.87287039461677 0.039675927028035 -0.138865744598123 0.186066416407337 0.534940947171093 0.0697749061527513 0.209324718458254 -0.534940947171093 NA 0.418649436916507 0.0930332082036683 -0.418649436916507 NA NA NA 0.418649436916507 NA 0.441907738967424 NA 0.837298873833015 1.00010698818943 -0.837298873833015 1.18617340459677 0.511682645120176 -0.534940947171093 -2.53515492354996 0.232583020509171 0.767523967680264 0.767523967680264 0.860557175883932 0.651232457425678 -0.186066416407337 -0.627974155374761 0.186066416407337 -0.139549812305502 -1.23269000869861 -0.39539113486559 0 0.209324718458254 -1.58156453946236 -1.11639849844402 -0.255841322560088 -0.511682645120176 -1.7676309558697 -0.465166041018341 -0.0232583020509171 0.744265665629346 0.418649436916507 -1.44201472715686 NA -2.7212213399573 2.06998888253162 NA NA -0.581457551272927 1.16291510254585 -1.48853133125869 1.93043907022612 1.81414755997153 0.697749061527512 0.697749061527512 -2.00021397637887 -1.13965680049494 0.441907738967424 -0.697749061527512 0.209324718458254 -1.74437265381878 -2.95380436046647 0.372132832814673 0.604715853323844 0.139549812305503 1.34898151895319 0.0232583020509171 -1.00010698818943 -0.55819924922201 -0.418649436916507 0.907073779985766 0.9535903840876 0.604715853323844 0.302357926661922 -0.0232583020509171 0.511682645120176 1.44201472715686 0.883815477934849 2.44212171534629 0.375 -2.22185191356996 -0.47611112433642 1.81338499269117 -0.154801157912661 1.32686706782281 -0.928806947475967 1.37560615419569 1.64185250662066 0.628651581648089 0.406004146481057 0.117872171559017 0.510779410089072 -1.82047020518926 -1.34898151895319 0.812008292962115 -2.59318777429837 1.05389181168218 2.07343455690953 0.174867974679117 -0.134898151895319 0.224830253158865 1.59543006568502 NA -0.741939835424255 -0.186561273897782 0.932806369488908 0.340079374526014 -0.0680158749052028 -0.775 -1.125 NA -0.54862465 0.01490644 0.674490759476595
RV0195 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.703192493922408 0.559683821693345 1.8225601373091 1.73645493397166 -0.444876883910095 -0.932806369488908 -1.62164799618841 0.0143508672229063 -2.08087574732141 -1.76515666841747 -0.186561273897782 -0.588385556139158 1.07631504171797 -0.817999431705658 -0.129157805006157 0.50228035280172 0.703192493922408 0.73189422836822 0.186561273897782 -0.375 -0.0750000000000001 NA NA -3.72160195522968 0.579268534609311 0.198379635140175 0.864935209211163 0.388824084874743 0.119027781084105 0.372953714063529 -1.78541671626158 0.182509264328961 0.769712984343879 NA 0.261537233266435 0.212997081939977 -0.24849659559664 -1.06498540969989 0.319495622909966 0.993986382386561 1.02948589604322 -1.88147422380313 -1.06498540969989 -0.638991245819932 NA 0.780989300446584 0.24849659559664 0.319495622909966 NA -0.390494650223292 -1.70397665551982 -2.62696401059305 -2.59146449693639 NA 1.02948589604322 1.34898151895319 0.709990273133258 0.496993191193281 1.45548005992318 3.23045574275632 0.390494650223292 1.27798249163986 0.319495622909966 -0.212997081939977 -0.816488814103247 1.63297762820649 1.17148395066988 -0.461493677536618 NA 0.24849659559664 1.10048492335655 0.212997081939977 NA NA NA 0.283996109253303 4.65043628902284 -1.9169737374598 0.85198832775991 NA NA NA NA -0.674490759476595 -0.262301962018676 -1.16162297465414 -0.4 -0.4 0 0.15 NA NA NA NA NA -0.406004146481057 -1.46685369051221 -1.97763310060128 0.814040571782098 0.860557175883932 1.83740586202245 -0.0232583020509171 -0.116291510254585 -0.16280811435642 NA NA NA NA -0.0911473999292697 -0.182294799858539 -1.1484572391088 -0.546884399575618 NA NA 0.41927803967464 -0.0546884399575618 -1.25783411902392 NA 0.856785559335134 NA 0.473966479632202 NA 1.27606359900977 1.25783411902392 0.236983239816101 1.16668671909465 NA 0.966162439250258 1.00262139922197 -0.109376879915123 -0.947932959264404 0.145835839886831 0.0182294799858539 0.583343359547326 0.60157283953318 0.565113879561472 0.309901159759517 1.42189943889661 2.13284915834491 -0.164065319872685 -0.765638159405865 -0.127606359900977 0.364589599717078 0.638031799504887 -0.856785559335134 -1.8594069585571 -1.05730983917953 -1.44012891888246 -0.364589599717078 -1.56773527878344 -1.05730983917953 1.25783411902392 NA NA 2.18753759830247 -1.84117747857125 1.03908035919367 NA NA -1.58596475876929 -0.0546884399575618 -0.0911473999292697 0.401048559688786 1.53127631881173 1.71357111867027 1.02085087920782 -0.546884399575618 -0.473966479632202 0.41927803967464 NA -0.856785559335134 -0.255212719801955 0.0182294799858539 2.58858615799126 1.02085087920782 2.91671679773663 3.15370003755273 -0.0729179199434157 -1.69534163868441 -0.382819079702932 -0.364589599717078 0.182294799858539 -0.51042543960391 0.820326599363427 0.364589599717078 -0.820326599363427 -0.218753759830247 0.838556079349281 0.528654919589764 0.692720239462449 0.3 -1.65388830063439 -1.11799153283107 0.574034688916251 -0.229613875566501 1.26287631561575 -1.26287631561575 0.909540569597227 -0.255488924044165 0.197411929602906 0.674490759476595 0.50998081814084 -0.526431812274416 -1.59574643095682 -1.71090338989185 0.526431812274416 -1.18447157761744 2.25605529893896 0.9 -0.25 NA NA NA NA -1.32352903746351 1.06988189434219 NA -0.033967160549181 -0.101901481647543 -0.39675927028035 0 NA NA NA 2.25
RV1373 NA 0.337245379738298 -0.168622689869149 0.590179414542021 -1.43891362021674 0.659502075932671 NA 0.0599547341756974 -0.989253113899006 -0.0599547341756971 1.55882308856813 0.779411544284066 0.63481483244856 0.202347227842979 0 1.04546067718872 1.58505328477 -0.0337245379738297 -1.38270605692702 0.539592607581276 -1.21408336705787 -1.21408336705787 -1.38270605692702 -1.2478079050317 -0.674490759476595 0.337245379738298 -0.168622689869149 -0.0674490759476595 0.472143531633617 0.674490759476595 0.370969917712127 0.741939835424255 -1.07918521516255 -0.179864202527092 -0.0688255877016934 0.536839584073208 -0.61943028931524 0.867202405041337 0.702020994557273 1.2801559312515 0.481779113911854 1.66557922238098 0.867202405041337 NA 2.07853274859114 0.234006998185758 NA 0.224830253158865 -1.17148395066988 -0.674490759476595 -1.34898151895319 -0.212997081939977 NA NA -0.887487841416573 -0.674490759476595 -0.354995136566629 0.283996109253303 1.13598443701321 0.212997081939977 0.425994163879955 NA 0.212997081939977 -2.8754606061897 0.141998054626652 -0.674490759476595 NA 0.24849659559664 0.816488814103247 0.674490759476595 1.84597471014647 0.922987355073235 2.09447130574311 0.603491732163269 0.425994163879955 -0.532492704849943 NA -1.77497568283315 0.674490759476595 0.0354995136566629 -0.816488814103247 -1.59747811454983 0 1.17148395066988 0.993986382386561 NA NA NA 1.2424829779832 2.87546060618969 -2.09447130574311 0.425994163879955 NA NA 0.1534769392821 0.541208154310561 -0.697749061527512 -1.04662359229127 -0.465166041018342 -1.30930559192516 0 1.11092595678498 0.515787051364455 -0.700000000000001 0.349999999999999 -0.35 NA NA -1.24831125634474 -0.765093995824197 -4.99324502537897 -0.200524279844393 0.92970347927855 0.783867639391719 -0.309901159759517 -0.309901159759517 -0.0546884399575618 0.79901213045689 0.632983635816497 -0.0933910282352209 0.736751444966742 -0.117302740778538 0.527862333503422 -0.410559592724884 -0.967747611422941 -1.84751816726198 -0.117302740778538 NA -0.821119185449768 -1.64223837089954 1.96482090804052 0.821119185449768 -2.08212364881905 0.586513703892692 0.117302740778538 1.02639898181221 0.938421926228306 0.909096241033672 0.234605481557077 -0.70381644467123 0.938421926228306 1.14370172259075 -0.967747611422941 -0.293256851946346 0.439885277919519 0.234605481557077 0.70381644467123 1.43695857453709 1.11437603739611 0.762467815060499 1.43695857453709 0.821119185449768 0.351908222335615 0.146628425973173 -0.117302740778538 0.175954111167807 0.762467815060499 -0.32258253714098 -0.733142129865864 -0.733142129865864 -1.34898151895319 0.146628425973173 -0.997073296617576 -1.20235309298002 -0.381233907530249 -3.31380242699371 -0.117302740778538 1.64223837089954 -1.14370172259075 1.31965583375856 NA 0.909096241033672 -0.909096241033672 1.05572466700684 -1.26100446336929 -0.381233907530249 2.02347227842979 1.31965583375856 1.46628425973173 -1.11437603739611 -1.08505035220148 NA -3.19649968621517 -0.879770555839037 -0.615839389087326 -0.32258253714098 0.791793500255134 0.70381644467123 1.31965583375856 1.58358700051027 -0.381233907530249 -3.07919694543663 -0.381233907530249 -0.909096241033672 0.909096241033672 0.762467815060499 1.524935630121 0.909096241033672 -0.997073296617576 0.821119185449768 0.293256851946346 0.234605481557077 2.81526577868492 0.862720738865413 NA -0.732304253146018 1.10048492335655 -0.177497568283314 2.44946644230974 -0.709990273133258 0.649963822768356 0.600909949351876 0.643119096245126 0.0156858316157348 0.69017659109233 -0.439203285240574 -0.392145790393369 -0.925464065328352 0.298030800698961 -1.25486652925878 NA 0.337245379738298 -2.68547246828644 0.284784987334562 0.764422860740141 2.50525139234164 0.65 -0.45 2.8525338369531 -0.0421556724672872 -0.168622689869149 0.53798667720157 -0.224830253158865 0 0 -0.51412236 0.591191345 0.5
RV1541C -1.07553931916538 0.0911473999292694 0.41927803967464 1.51304683882588 NA 0.562075632897163 0.149886835439244 -0.337245379738298 NA -1.0492078480747 1.46139664553262 1.34898151895319 1.01173613921489 -1.6084010418288 2.02347227842979 1.15874053551107 NA -0.605312220043098 -1.12415126579433 -1.36627615381156 -0.951204917210583 -0.155651713725368 -1.29709761437807 0.0864731742918712 -0.639901489759847 3.06115036993224 0.847437108060337 -0.743669298910092 0.259419522875614 0.155651713725368 0.674490759476595 1.36627615381156 0.025 -1.975 0.518839045751227 1.06362004379002 -0.57072295032635 0.985794186927331 1.34898151895319 1.1414459006527 0.0259419522875614 0.544780998038788 0.207535618300491 -3.13897622679492 0.726374664051718 0.155651713725368 NA 0.87287039461677 -0.722668670867781 -1.27671465186641 -1.6380489873003 -0.698579715172188 1.78258272147386 1.51760420882234 -1.78258272147386 -1.54169316451793 -1.42124838603997 0.794935537954559 1.20444778477963 0.602223892389817 1.58987107590912 -1.27671465186641 -0.554045980998632 -1.22853674047523 -1.20444778477963 -1.08400300630167 -0.554045980998632 0.433601202520668 2.07165018982097 0.554045980998632 0.939469272128115 -0.0963558227823708 NA 1.05991405060608 0.385423291129483 0.505868069607446 -1.10809196199726 -1.22853674047523 0.0963558227823707 0.62631284808541 -0.192711645564742 -2.81840781638434 1.51760420882234 1.49351525312675 1.15626987338845 -1.71031585438708 -0.192711645564742 -1.10809196199726 0.554045980998632 0.62631284808541 -0.240889556955927 0.385423291129483 -1.99938332273419 -0.144533734173556 -0.0118331712188876 0.0118331712188876 0.114320467707897 -0.811675320726072 -0.388689590206851 -0.532492704849944 -0.674490759476595 0.958486868729898 0.0354995136566629 NA NA NA NA NA 0 0.344420813349751 -3.98954108796795 0.280173084705663 0.404694455685957 0.321680208365761 -0.217912399215515 -0.217912399215515 0.902779939607135 1.45858626736814 1.13820315661675 -1.02016727370835 -0.0252934034803723 0 0.488424343069259 -0.0697749061527512 -0.325616228712839 -1.65133944561511 1.34898151895319 0.232583020509171 -0.279099624611005 -0.39539113486559 NA 0.39539113486559 -3.88413644250315 0.139549812305502 NA 1.74437265381878 0.534940947171093 0.534940947171093 0.279099624611005 NA 1.79088925792062 2.18628039278621 -0.232583020509171 -0.930332082036683 0.0697749061527513 0.39539113486559 0.348874530763756 0.0930332082036683 0.488424343069259 -0.39539113486559 1.51178963330961 1.39549812305502 1.79088925792062 -0.814040571782098 -1.11639849844402 0.325616228712839 0.465166041018342 -0.511682645120176 -0.162808114356419 -0.209324718458254 -1.86066416407337 -0.209324718458254 -0.697749061527512 -0.651232457425678 -0.255841322560088 -2.81425454816097 NA 1.6280811435642 -1.00010698818943 3.16312907892472 2.18628039278621 -0.162808114356419 -0.674490759476595 0.790782269731181 -2.06998888253162 1.0931401963931 0.837298873833015 2.97706266251739 -0.325616228712839 -0.767523967680263 -0.9535903840876 0.72100736357843 -4.02368625480865 -1.60482284151328 -0.325616228712839 -1.23269000869861 1.60482284151328 0.814040571782098 0.139549812305502 0.976848686138517 0.0697749061527513 -2.09324718458254 -0.116291510254585 -0.488424343069259 1.39549812305502 0.488424343069259 1.41875642510594 0.186066416407337 0.209324718458254 0.348874530763756 1.16291510254585 1.04662359229127 2.30257190304079 0.0368574185506336 -4.13341773115144 -0.639901489759847 1.40086542352831 -0.501544410892853 1.26250834466132 -0.259419522875614 2.22822840184232 1.77053824362606 1.34898151895319 0.821119185449768 1.21212832137823 -0.527862333503422 -0.821119185449768 -0.586513703892692 1.15347695098896 -0.508311876706999 2.45 0.9790994895628 -0.957341723128071 -0.836368541750978 -0.0629524708844823 NA 3.58296365225147 -0.7475247907575 1.16162297465414 1.01173613921489 0.820326599363427 NA -0.0499999999999999 -1.1 0 -2.17982208851763 0.321580400766541 1.5
RV2529 -0.637019050616784 0.299773670878487 NA 1.12415126579433 0.143073797464732 0.674490759476595 0.429221392394197 -0.715368987323661 -1.77820291134739 -0.756247215170728 2.35049810120632 1.16502949364139 0.604715853323844 -1.87893854425623 0.674490759476595 1.49351525312675 0.433601202520668 -0.674490759476595 -1.49351525312675 -1.01173613921489 -3.70969917712127 -0.819024493650151 0.144533734173556 0.0963558227823707 0 -0.240889556955927 -0.240889556955927 -0.578134936694224 0.770846582258966 0.529957025303039 0.385423291129483 1.92711645564741 0.425 -0.475 0.390494650223292 NA -1.5264790872365 0.177497568283315 -0.0709990273133258 0.532492704849944 0.354995136566629 1.10048492335655 0.816488814103247 -1.20698346432654 1.34898151895319 0.745489786789921 NA 0.337245379738298 -0.815009667700886 -0.702594541121453 -1.06794370250461 -0.44966050631773 1.23656639237376 0.590179414542021 -1.93916093349521 -0.562075632897163 -1.12415126579432 0.843113449345744 0.533971851252305 -0.0562075632897162 0.674490759476595 NA -1.06794370250461 -1.57381177211206 -0.983632357570035 -1.2084626107289 -0.252934034803723 1.37708530059805 0.955528575925176 0.365349161383156 -0.196726471514007 0.75880210441117 NA 0.477764287962588 -0.533971851252304 0.75880210441117 -0.281037816448581 -0.646386977831737 0.0843113449345744 1.77053824362606 0.0843113449345744 -2.36071765816808 0.843113449345744 0.955528575925176 0.281037816448581 NA -0.702594541121453 NA 1.26467017401862 2.9508970727101 -1.7424344619812 0.730698322766311 NA NA NA NA -0.845145048018866 -0.292550208929608 -0.820765863941399 NA NA NA NA NA -0.025 -0.375 NA NA -0.607041683528936 -0.410826189863017 -2.05413094931508 0.206698781129924 0.750642941998146 0.750642941998146 -0.315487613303569 -0.250214313999382 0.271972080434111 NA NA NA NA -0.236071765816808 -0.168622689869149 -0.505868069607446 -0.101173613921489 -0.944287063267233 0.404694455685957 1.55132874679617 -0.640766221502766 -0.775664373398084 0.708215297450425 0.337245379738298 -2.63051396195872 0.168622689869149 1.04546067718872 1.18035882908404 0.539592607581276 1.71995143666532 0.134898151895319 -0.944287063267233 0.573317145555106 0.370969917712127 0.168622689869149 0.0674490759476596 -0.134898151895319 -0.0337245379738297 0.607041683528936 -0.0674490759476595 1.55132874679617 0.843113449345744 1.61877782274383 1.9222986645083 1.65250236071766 -1.31525698097936 -0.438418993659787 NA 0.0674490759476596 0 -2.09092135437745 0.269796303790638 -0.573317145555106 -0.0337245379738297 -1.01173613921489 -0.472143531633617 0.168622689869149 NA -2.46189127208957 1.18035882908404 -0.438418993659787 1.61877782274383 4.75515985431 0.809388911371914 -1.75367597463915 0.708215297450425 -1.11290975313638 -0.134898151895319 0.640766221502766 2.02347227842979 2.05719681640362 -1.48387967084851 -0.573317145555106 0.539592607581276 NA -0.370969917712127 -0.708215297450425 -1.14663429111021 3.03520841764468 -0.202347227842979 2.05719681640362 1.04546067718872 -0.168622689869149 -2.93403480372319 -0.640766221502766 NA 0.202347227842979 0.505868069607447 1.28153244300553 0.741939835424255 -0.370969917712127 0.607041683528936 0.775664373398084 0.910562525293404 NA 0.373122547795563 -3.89326311799149 -0.529347178323404 0.636491280069463 -1.20648347117644 1.39648086821211 -0.21849700659101 1.48013249996253 0.693226613906501 0.726374664051718 0.674490759476595 1.06362004379002 -0.324274403594517 -0.972823210783551 -1.03767809150245 0.687461735620376 -0.674490759476595 1.55 0.152304365043102 -1.41425481825738 -0.325 0.375 2.0647676310508 0.207535618300491 -2.94008792592362 1.45015513287468 0.65762849048968 NA NA -0.722668670867781 -0.305126772144174 -0.674490759476595 NA 0.795352400024998 0.750000000000001
[+] Show/hide bicluster #494 motif PSSM #1. bicluster 494 motif PSSM #1 Mycobacterium tuberculosis H37Rv 17x4
POSITION A C G T
1 1 0 0 0
2 0 0 1 0
3 0 0 1 0
4 0 0 0 1
5 1 0 0 0
6 0 1 0 0
7 0.666667 0.333333 0 0
8 0 0 0.333333 0.666667
9 0 0.333333 0 0.666667
10 0 0 0 1
11 1 0 0 0
12 0 1 0 0
13 1 0 0 0
14 1 0 0 0
15 0 0 1 0
16 0 1 0 0
17 1 0 0 0 [+] Show/hide bicluster #494 motif PSSM #2. bicluster 494 motif PSSM #2 Mycobacterium tuberculosis H37Rv 9x4
POSITION A C G T
1 0 0 0.142857 0.857143
2 0 1 0 0
3 0 0 1 0
4 0.857143 0 0.142857 0
5 0 1 0 0
6 0.714286 0 0.285714 0
7 0.142857 0 0 0.857143
8 0.142857 0.571429 0 0.285714
9 0.857143 0 0 0.142857 |