Bicluster 529 (zzz

GENES 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3 4084:::High.iron.wt.vs.high.iron.ideR.Complement.3a 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.2a 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.6 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.vs..MTB1254.rep2 4089:::MTB1254.vs..MTB1254.rep5 4089:::MTB1254.vs..MTB1254.rep6 4099:::H37Rv.hypoxia.2hr.rep.1 4099:::H37Rv.hypoxia.2hr.rep.2 4101:::H37Rv.Day14.1 4101:::H37Rv.Day14.3 4101:::H37Rv.Day24.2 4101:::H37Rv.Day24.3 4101:::H37Rv.Day6.3 4101:::NRP.Day10..1 4107:::H2O2.4mM.vs.ctrl.12h.1 4107:::Palmitate.Glucose..1 4107:::Palmitate.Glucose..2 4107:::pH4.8vspH6.8..5h. 4107:::Rif.0.5ug.mL.vsDMSO.2.5hA 4107:::UV.20J.vs.ctrl.8h.1 4107:::UV.40J.vs.8h.2 4107:::WT.t.6h.WT.t.0h..1 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.BZA.pH5.6..4h..2 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.1ug.mL.RifpvsEtOH..6h 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2ug.mL.Mtmvsctrl..2h.C 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X100ug.mL.Cephalexin.Ctrl..6h 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X10ug.mL.methoxatinvsDMSO..6h.A 4107:::X10ug.mL.PA.21vsDMSO..6hA 4107:::X12.5ug.mL.AntimycinvsDMSO..6h 4107:::X1ug.mL..241vsDMSO..6hA 4107:::X1ug.mL..59vsDMSO..6hA 4107:::X200uM.Dipyridylvsctrl..6hA 4107:::X20mJ.UVvsctrl..6h. 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mL.Procept6776vsDMSO..6h 4107:::X250uM.DeferroxaminevsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6h 4107:::X30ug.mLProcept6776vsDMSO.6hA 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X40ug.mLProcept6778vsDMSO.6hA 4107:::X4mM.H2O2vsctrl..2h. 4107:::X60ug.mL.ChlorprovsEtOH..6h 4107:::X6ug.mL.MenadionevsDMSO..6h 4363:::H37Rv.hypoxia.4hr.rep.1 4363:::H37Rv.hypoxia.4hr.rep.3 4363:::H37Rv.hypoxia.4hr.rep.6 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.0.3.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.2 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.1 4581:::H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4615:::AA_10uM_10.min_01 4615:::AA_30uM_10min_03 4615:::AA_30uM_1h_03 4615:::AA_30uM_24h_02 4615:::AA_30uM_24h_03 4615:::AA_30uM_4h_07 4615:::AA_60uM_24h_03 4615:::Acetate.3mM.10m_04 4615:::Acetate.3mM.10m.02 4615:::Acetate.3mM.2h.01 4615:::Acetate.3mM.2h.03 4615:::Acetate.3mM.2h.06 4615:::ETYA_30uM_10min.02 4615:::ETYA_30uM_10min.03 4615:::ETYA_30uM_10min.04 4615:::ETYA_3uM.AA_1h_02 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_1h_08 4615:::L2A_30uM_4h_04 4615:::L2A_30uM_4h_06 4615:::L2A_30uM_4h_08 4615:::MTB1254_Bottom_14D_01 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_Bottom_14D_03 4615:::MTB1254_Bottom_14D_04 4615:::MTB1254_FA5_10min_04 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254_Pellicle_21D_01 4615:::MTB1254_Pellicle_21D_03 4615:::MTB1254_Pellicle_21D_04 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.1683._01 4615:::MTB1254.3219.1._01 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.whiB4_SDS_90MIN_01 4615:::MTB1254vsMTB1254B4 4615:::OA_50uM_10min_05 4615:::OA_50uM_10min_06 4615:::OA_50uM_1h_03 4615:::OA_50uM_1h_05 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_02 4615:::OA_50uM_2h_03 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::OA_50uM_2h.0.5.BSA_30min._01 4615:::OA_50uM_2h.1.0..BSA_30min_01 4615:::OA_50uM_30min_03 4615:::OA_50uM_4h_05 4615:::PA_50uM_10.min_03 4615:::PA_50uM_24h_06 4615:::PA_50uM_30min_09 4615:::PA_50uM_3d_03 4615:::PA_50uM_3d_06 4615:::PA_50uM_8h_05 4615:::PA_50uM.OA_10uM_4h_01 4615:::Rv.MT106_100503_01 4615:::Rv.MT90_100603_01 4615:::Rv.MT90_100803_01 4615:::Rv.MT96_100503_01 4615:::Rv.p0485.1. 4615:::Rv.p0485.1._OK 4615:::Rv3524.1_OA_10min 4615:::Starvation_1254_12h_01 4615:::Starvation_1254_12h_03 4615:::Starvation_1254_12h_04 4615:::Starvation_1254_24h_02 4615:::Starvation_1254_24h_04 4615:::Starvation_1254_24h_05 4615:::Starvation_1254_24h_06 4615:::Starvation_1254_24h_07 4615:::Starvation_1254_3d_02 4615:::Starvation_1254_3d_04 4615:::Starvation_1254_5d_04 4615:::Starvation_1254_6h_02 4615:::Starvation_1254_6h_05 4615:::Starvation_1254_6h_08 4615:::Starvation_1254_OA50_5d_01 4615:::Starvation_1254_PA50.OA30_6h_01 4615:::Starvation_1254_PA50.OA30_6h_04 4615:::Starvation_OA50_24h_02 4615:::Starvation_OA50_6h_02 4615:::TBD091 4615:::TBD1266 4615:::TBD1268 4615:::TBD1275 4615:::TBD426 4615:::TBD819 4615:::TBE055 4615:::TBF466 4615:::Test_261B4.1 4615:::Test.4 4615:::Tet_50ng_30M_01 4615:::Tet_5ug_30M_01 4615:::WM_T0_01 4615:::WT_85.1_OA_10min_02 4615:::WT_85.1_PA_10min_02 4615:::X7H9_PA_300uM_4h_T0_01 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.3 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.3 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.5 4815:::H37Rv.reaeration.for.24hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.3 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.1 Raghavan_Nature2008:::WT.rep2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.2.hr.after.macrophage.infection RV0538 -0.120444778477963 0.867202405041337 -0.843113449345744 -0.674490759476595 -0.25 0.6 0.9 -0.4 -0.15 -0.45 -0.25 -0.65 -0.75 -0.478670861564035 -2.04523004486451 0.652732993041866 0.696248525911324 0.261093197216747 -0.870310657389155 -0.0435155328694577 0.522186394433493 -0.0870310657389155 0.696248525911324 0.78327959165024 1.30546598608373 -0.304608730086204 0.565701927302951 -0.95734172312807 1.1314038546059 0.609217460172409 0 1.47952811756156 0.826795124519697 0.39163979582512 1.26195045321427 0.565701927302951 0.652732993041866 2.17577664347289 -0.375 1.075 -1.15626987338845 -1.23335453161435 -1.58023549363088 -2.65942070879343 -0.115626987338845 1.65732015185678 1.05991405060608 NA NA 0.0963558227823707 -1.83076063286504 0.0963558227823707 0.770846582258966 -1.12415126579433 NA NA 0.353304683535359 0.546016329100101 0.256948860752989 -1.50957455692381 -1.0920326582002 1.0920326582002 0.128474430376494 0.513897721505977 NA NA NA -0.642372151882472 -0.417541898723607 -0.128474430376494 0.224830253158865 -1.28474430376494 0.89932101263546 0.192711645564741 0.80296518985309 -0.513897721505977 0.160593037970618 0.642372151882472 -0.80296518985309 1.6380489873003 0.513897721505977 -2.56948860752989 NA NA NA NA NA 1.7 -1.05 -1.05 1.2 -0.1 -0.697354853018175 0.354393449894482 0.600909949351876 -0.600909949351876 -0.274369122498954 0.126467017401862 -0.117302740778538 -1.14370172259075 0.469210963114153 0.0586513703892691 0.381233907530249 0.0879770555839037 0.909096241033672 1.26100446336929 0.175954111167807 -0.0293256851946346 0.967747611422941 0.439885277919519 1.26100446336929 0.70381644467123 1.93549522284588 0.263931166751711 0.645165074281961 1.43695857453709 0.0586513703892691 0.32258253714098 -0.234605481557077 0.146628425973173 0.381233907530249 -1.31965583375856 -2.31672913037613 -0.469210963114153 -0.762467815060499 1.31965583375856 -0.821119185449768 -0.909096241033672 -1.11437603739611 -0.674490759476595 -0.879770555839037 -1.23167877817465 -5.71850861295374 -0.146628425973173 0.146628425973173 -0.351908222335615 -0.234605481557077 -0.997073296617575 -1.34898151895319 0.733142129865864 2.49268324154394 -0.0879770555839037 -1.7008897412888 0.821119185449768 1.23167877817465 0.381233907530249 0.527862333503422 0.791793500255134 0.410559592724884 0.146628425973173 1.31965583375856 2.3753805007654 -1.90616953765125 0.263931166751711 0.469210963114153 -0.263931166751711 0.117302740778538 0.32258253714098 0.205279796362442 0.733142129865864 0.293256851946346 0.381233907530249 0.381233907530249 -0.234605481557077 -2.25807775998686 -1.20235309298002 -1.20235309298002 0 -2.11144933401369 -2.25807775998686 -1.20235309298002 -0.117302740778538 -1.524935630121 -1.37830720414782 -2.31672913037613 0.0879770555839037 -1.49560994492636 -1.40763288934246 -4.8387380571147 -2.02347227842979 -1.17302740778538 1.43695857453709 -0.0586513703892691 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