Bicluster 539 (zzz

GENES 2867:::H37Ra..7H9.roll.replicate.4 2867:::H37Ra..7H9.shake.replicate.1 2867:::H37Rv..Dubos.media.replicate.1 2867:::H37Rv..Dubos.media.replicate.4 2885:::H37Ra..7H9.roll.replicate.2 2885:::Strain.M3061a..replicate.4 4055:::H37Rv.Vs.M.bovis.rep3 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.2 4082:::Rv3676.null.Vs.H37Rv.wild.type.2 4084:::High.iron.wt.vs.low.iron.wt.2a 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.3 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1 4099:::H37Rv.hypoxia.2hr.rep.2 4099:::H37Rv.hypoxia.2hr.rep.3 4099:::H37Rv.hypoxia.2hr.rep.4 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4 4101:::NRP.Day14..4 4101:::NRP.Day20..2 4101:::NRP.Day30..1 4101:::NRP.Day6..1 4101:::NRP.Day6..3 4107:::Dubos.NRP.1vsDubos.log.phase 4107:::EMB.10ug.mL.vs.DMSO.12h.1 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::pH4.8vspH6.8..5h. 4107:::pH5.2vspH6.8..11h. 4107:::pH5.6vspH6.8..11h. 4107:::Succinate.7H9.based.medium..1 4107:::Succinate.7H9.based.medium..2 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.1mM.GSNOvsDMSO..6h.A 4107:::X0.2ug.mL..111891.DMSO..5.5h..3 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.4mM.NaN3.DMSO 4107:::X0.4ug.mL.PA824.DMSO..6h..1 4107:::X0.4ug.mL.PA824.DMSO..6h..2 4107:::X0.4ug.mL.PA824.DMSO..6h..3 4107:::X0.4ug.mL.PA824.DMSO..6h..4 4107:::X0.5mM.DNP.DMSO..6h 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X10ug.mL..109vsDMSO..6h 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.menadionevsDMSO..6h 4107:::X10ug.mL.PA.21vsDMSO..6h 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X10ug.mLmdn.0.1mMGSNO.DMSO..2 4107:::X150uM.Deferroxaminevsctrl..6hA 4107:::X1ug.mL..121940.DMSO..12h 4107:::X1ug.mL..241vsDMSO..6hA 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X20ug.mL.Prcp.6776.DMSO..6h..1 4107:::X20ug.mL.Procept6776vsDMSO..6h 4107:::X24ug.mL.cltrmazole.DMS..6h..2 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X30ug.mLProcept6776vsDMSO.6h 4107:::X30ug.mLProcept6776vsDMSO.6hA 4107:::X40ug.mLProcept6778vsDMSO.6hA 4107:::X5ug.mL.OfloxvsEtOH..6hA 4107:::X7d.Dubos.NRP.1vsDubos.log.phase 4107:::X7d.Dubos.NRP.1vsDubos.log.phase.A 4107:::X9ug.mLAscidideminNpvsDMSO.6hA 4363:::H37Rv.hypoxia.4hr.rep.3 4363:::H37Rv.hypoxia.7.day.rep.3 4363:::H37Rv.hypoxia.7.day.rep.6 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.5 4364:::H37dosR.mutant.hypoxia.12hr.rep.1 4364:::H37dosR.mutant.hypoxia.12hr.rep.3 4364:::H37dosR.mutant.hypoxia.4hr.rep.4 4364:::H37dosR.mutant.hypoxia.8hr.rep.2 4364:::H37dosR.mutant.hypoxia.8hr.rep.3 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3 4583:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.2 4615:::AA_30uM_4h_01 4615:::AA_30uM_4h_09 4615:::AA_3uM_10min_02 4615:::AA_60uM_24h_03 4615:::AA_60uM_2h_T0_03 4615:::Acetate.3mM.30m.04 4615:::Acetate.3mM.30m.07 4615:::Acetate.3mM.60m.02 4615:::Acetate.3mM.60m.03 4615:::C2_ceramide_5uM_1h_01 4615:::CA_50uM_10min_01 4615:::CHP_25uM_1h_01 4615:::ETYA_30uM_10min.02 4615:::Glycerol_1._30M_01 4615:::L2A_30uM_10min_02 4615:::LAA_50uM_10min_01 4615:::MDG_1254.pMV261.3524_03 4615:::MDG_1254.pMV261.3524_04 4615:::MT1254.whiB4_CK_01 4615:::MTB1254_Pellicle_21D_04 4615:::MTB1254.0485.1._AA_10m_01 4615:::MTB1254.0485.1._PA_30m_01 4615:::MTB1254.3219.2._01 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.B4.1._OA_10MIN_02 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254vsMTB1254B4 4615:::MTB1370_PA50_1h_03 4615:::OA_50uM_10min_02 4615:::OA_50uM_1h_05 4615:::OA_50uM_24h_01 4615:::OA_50uM_24h_02 4615:::OA_50uM_24h_05 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_02 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::OA_50uM_2h.1.0..BSA_30min_01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_01 4615:::OA_50uM_30min_03 4615:::PA_50uM_10.min_02 4615:::PA_50uM_10min_06 4615:::PA_50uM_12h_01 4615:::PA_50uM_1h_12 4615:::PA_50uM_24h_06 4615:::PA_50uM_24h_09 4615:::PA_50uM_2h_01 4615:::PA_50uM_2h_04 4615:::PA_50uM_30min_01 4615:::PA_50uM_3d_06 4615:::PA_50uM_4h_03 4615:::PA_50uM_4h_T0_01 4615:::PA_50uM_8h_03 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.MAPP_30m_01 4615:::PA_50uM.OA_30uM_30min_02 4615:::Rv.MT71_100603_01 4615:::Rv.MT71_100803_01 4615:::Rv.MT90_100503_01 4615:::Rv.MT90_100703_01 4615:::Rv.MT90_100903_01 4615:::Succinate_10mM_30min_01 4615:::TBD041 4615:::TBD818 4615:::TBD819 4615:::WT_85.1_PA_10min_02 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.1 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.3 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X10ug.ml.Ethambutol.vs.DMSO.12hrs.3 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.4 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1 Raghavan_Nature2008:::WT.rep2 Rohde_CellHostMicrobe2007:::CDC1551.in.ctrl.vs.100.nM.Concanamycin.A.treated.macrophages.for.2.hr Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs RV2551C 1.44533734173556 0.0642372151882472 -1.12415126579433 NA 0.591334364472631 -0.129354392228388 NA NA 0.404694455685957 1.00010698818943 1.51178963330961 0.9535903840876 -1.55830623741144 -1.83740586202245 1.30747439529309 -1.30747439529309 -0.6 0.380760912607755 0.620096343389773 -2.51302202321118 -0.663611876259231 0.0326366496520933 -2.2954443588639 -0.859431774171791 0.359003146173026 1.05525167208435 0.532492704849943 0.603491732163269 0.0354995136566629 -1.05141206624293 -1.78541671626158 -1.5870370811214 -0.95222224867284 0.63481483244856 0.674490759476595 0.515787051364455 -0.813356504074718 -0.87287039461677 -1.10964608817117 0.565701927302951 -1.10964608817117 -1.04437278886699 -0.913826190258613 0.152304365043102 NA 1.24019268677955 -0.326366496520933 -0.152304365043102 -1.24019268677955 -0.130546598608373 -0.152304365043102 -0.674490759476595 0.9790994895628 1.10964608817117 -0.478670861564035 0.19581989791256 1.19667715391009 2.95905623512313 2.58917420573274 1.00085725599753 0.152304365043102 0.870310657389155 0.9790994895628 1.34898151895319 1.21843492034482 0.696248525911324 -0.348124262955662 -0.565701927302951 -0.174062131477831 -0.19581989791256 0.500428627998764 0.152304365043102 0.674490759476595 2.19753440990762 -0.0870310657389155 -1.63183248260467 -0.500428627998764 0.870310657389155 0.892068423823884 1.82765238051723 0.108788832173644 -0.261093197216747 -0.304608730086204 0.261093197216747 0.95734172312807 1.10964608817117 0.630975226607137 -0.0652732993041867 -0.100456070560344 0.100456070560344 -0.129157805006157 -0.530982087247532 0 -0.50228035280172 0.940199240482527 0 -0.654051645553062 -1.67600734172972 0.613173417705996 -0.484790233373803 1.09604748414947 -0.505868069607446 1.83377175232699 -1.74946040739242 1.32790368271955 0.466955141176104 -1.00581955360545 0.792822471665472 0.934820526292123 -0.0118331712188876 -0.65082441703882 -0.0591658560944382 2.94645963350302 2.54413181206084 0.24849659559664 2.14180399061866 -0.366828307785517 -1.21881663554543 NA NA NA NA NA 0.202347227842979 0.978011601241063 -0.741939835424255 0.168622689869149 2.05719681640362 1.28153244300553 1.78740051261298 0.404694455685957 -0.168622689869149 -0.0337245379738298 -0.101173613921489 -1.34898151895319 -1.28153244300553 0.269796303790638 -0.708215297450425 0.809388911371914 -0.168622689869149 0.0337245379738297 -0.741939835424255 -0.101173613921489 -0.674490759476595 -0.809388911371914 1.31525698097936 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