Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,607,942 Δ1 bp 100% intergenic (+212/‑135) RCAP_rcc01484 → / → murD hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,607,9420T→.100.0% 526.1 119intergenic (+212/‑135)RCAP_rcc01484/murDhypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Reads supporting (aligned to +/- strand):  new base (44/75):  ref base (0/0):  total (44/75)

Only 100 of 138 total aligned reads displayed.

CCCGCATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCCGGGGAATGCGGGCGAGACCGGGCCGGACCGGCGCCTGTCTTCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCCTTGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTGGGCCGCGC  >  NC_014034/1607840‑1608034
                                                                                                      |                                                                                              
cccGCATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCCGGGG.ATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTCtc                                                                                               >  1:3559860/1‑100 (MQ=255)
cccGCATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTCtc                                                                                               <  2:2325916/101‑2 (MQ=255)
cccGCATTGGGCCCGCCGCGCCCCAGAACGCGCGCCCAGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTCtc                                                                                               <  1:4008234/101‑2 (MQ=255)
 ccGCATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTCtcc                                                                                              <  1:1854767/101‑3 (MQ=255)
  cGCATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTCtccg                                                                                             <  2:4614988/101‑4 (MQ=255)
    cATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGAc                                                                                          <  1:2613272/101‑1 (MQ=255)
     cttGTGCCCGCGGCGCCCCAGAACGGCCGCCCCGGCCCCTCAAGGATGGCGGC.GCCCCGGGAAGGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGAcc                                                                                         <  2:2209586/100‑1 (MQ=255)
     aTTGTGGCTGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGGGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCCCCTGGCTCCCgcc                                                                                          >  2:2957928/1‑99 (MQ=255)
       tgtgGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCCGTC.TCCGACCtt                                                                                       >  1:4296006/1‑101 (MQ=255)
        gtgGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATTGCGGCGGCCCGGGG.ATGCGGGC.AGACCGGGCC.GACCGCCCCCCGTC.CCCGACCttt                                                                                      >  2:2972441/1‑101 (MQ=255)
        gtgGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCttt                                                                                      <  2:3447351/101‑1 (MQ=255)
        gtgGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCttt                                                                                      <  1:1203393/101‑1 (MQ=255)
            ccgccgCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGTCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTccc                                                                                  <  1:767612/101‑1 (MQ=255)
            ccgccgCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTccc                                                                                  <  2:3474024/101‑1 (MQ=255)
            ccgccgCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCCGTC.TCCGACCTTTTccc                                                                                  >  1:626935/1‑101 (MQ=255)
             cgccgcGCCCCAGACCGGGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GCGAATGCGGGC.AGACCGGG.CGGACCGCCGCCTGTC.TCCGACCTTTTCCCa                                                                                 <  2:4748810/101‑1 (MQ=255)
             cgccgcGCCCCAGACCGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCa                                                                                 <  2:944091/101‑1 (MQ=255)
             cgccgcGCCCCAGAACGCGCGCCCCGGCCGCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGCG.GACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCa                                                                                 <  2:4365622/101‑1 (MQ=255)
              gccgcGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAg                                                                                <  2:4179627/101‑1 (MQ=255)
               ccgcGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCCGc                                                                               >  1:266805/1‑101 (MQ=255)
                cgcgCCCCAGACCGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCg                                                                              <  2:4611151/101‑1 (MQ=255)
                cgcgCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGGCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCg                                                                              <  2:542296/101‑1 (MQ=255)
                 gcgcCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.CACCGCCGCCCGTC.TCCGACCTTTTCCCAGCgg                                                                             >  2:394846/1‑101 (MQ=255)
                   gcCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGAt                                                                           <  1:3214110/101‑1 (MQ=255)
                   gcCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGACC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCgggt                                                                           >  1:3305676/1‑99 (MQ=255)
                     cccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGGCTGTC.TCCGACCCTTTCCCACCGGATcc                                                                         >  2:1372450/1‑101 (MQ=255)
                     cccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATcc                                                                         <  2:3920880/101‑1 (MQ=255)
                     cccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATcc                                                                         <  2:610368/101‑1 (MQ=255)
                      ccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATccc                                                                        <  2:3691872/101‑1 (MQ=255)
                      ccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATccc                                                                        <  1:1985277/101‑1 (MQ=255)
                      ccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATccc                                                                        <  2:2339750/101‑1 (MQ=255)
                      ccAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATccc                                                                        >  2:1985160/1‑101 (MQ=255)
                       cAGAACGCGCCCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCcg                                                                       <  2:3559593/101‑1 (MQ=255)
                         gAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCcgcg                                                                     <  1:2977463/101‑1 (MQ=255)
                         gAACGCGCGCCCCGGCCCCCCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCcgcg                                                                     <  1:3967457/101‑1 (MQ=255)
                          aaCGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCcgcgc                                                                    >  2:4506993/1‑100 (MQ=255)
                          aaCGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGa                                                                    <  1:1216371/101‑1 (MQ=255)
                          aaCGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGa                                                                    <  1:478409/101‑1 (MQ=255)
                              cgcgcCCCGGCCCCTCAAGGATGGCGGGGGCCCGGGG.ATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTACCCGCGGATCCCGCGACggg                                                                >  2:2458509/1‑101 (MQ=255)
                              cgcgcCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCCGTC.TCCGACCTTTTCCCAGCGGATCCCCCGCCggg                                                                >  2:1406761/1‑101 (MQ=255)
                               gcgcCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGCCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACgggg                                                               <  1:2971786/101‑1 (MQ=255)
                                 gcCCCGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTg                                                             <  2:1219930/101‑1 (MQ=255)
                                   cccGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCg                                                           >  1:3574203/1‑101 (MQ=255)
                                   cccGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCg                                                           <  1:4546495/101‑1 (MQ=255)
                                   cccGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGGGCg                                                           >  1:4047385/1‑101 (MQ=255)
                                    ccGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGa                                                          <  2:3729763/101‑1 (MQ=255)
                                    ccGCCCCCTCAGGGAGGGGGGC.GCCCGGGGAAGGCGGGC.AGCCCGGGCC.GCCCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGa                                                          <  1:3246064/101‑1 (MQ=255)
                                     cGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGAc                                                         <  2:245872/101‑1 (MQ=255)
                                     cGGCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGAc                                                         <  2:2163813/101‑1 (MQ=255)
                                      ggCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACg                                                        <  1:1848275/101‑1 (MQ=255)
                                       gatcgtCAAGGATGGGGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGc                                                       <  2:397622/96‑1 (MQ=255)
                                       gCCCCTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGGGCGACGc                                                       >  2:1270787/1‑101 (MQ=255)
                                          ccTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCCtg                                                    <  2:3121863/101‑2 (MQ=255)
                                          ccTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGGGCGACGCCtg                                                    >  1:1218877/1‑100 (MQ=255)
                                           cTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGCCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCCtgc                                                   <  1:4668817/101‑3 (MQ=255)
                                           cTCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGCCGGGGGGCGACGCCtgc                                                   >  1:17207/1‑99 (MQ=255)
                                           cTCAAGGATGGCGGAGGCCC.GGGAATGAGGG.AAGACCGGGCC.GACCGCAGCCTGTC.TCCGACCTTTTCCCAGCGGAACCCGCGACGGGGGGCGACGCCtgc                                                   >  2:1184167/1‑99 (MQ=255)
                                            tCAGGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCCtgcg                                                  <  2:874111/101‑4 (MQ=255)
                                            tCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGcagatc                                                  >  1:397666/1‑96 (MQ=255)
                                            tCAAGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGGGCGACGCCtgcg                                                  >  2:3037860/1‑98 (MQ=255)
                                            tCAAGGATGGCGCCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCCtgcg                                                  <  2:1570519/101‑4 (MQ=255)
                                             cAAGGATGGCGGC.GCCCCGGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGGGCGGGGCCtgcgg                                                 >  2:1172845/1‑97 (MQ=255)
                                               aGGATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.Tgcggcg                                              >  1:610679/1‑101 (MQ=255)
                                                ggATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGGGCGACGCC.TGCGgcgc                                             >  1:1673106/1‑101 (MQ=255)
                                                 gATGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGcgcc                                            >  1:4157541/1‑101 (MQ=255)
                                                  aTGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGGC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGAGCGACGccctcggccccg                                            >  2:557788/1‑91 (MQ=255)
                                                   tGGCGGCGGCCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGcgccgc                                          >  2:2377012/1‑101 (MQ=255)
                                                      cggcggcCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCg                                       <  1:4302510/101‑1 (MQ=255)
                                                      cggcggcCC.GGGAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCg                                       <  2:4295759/101‑1 (MQ=255)
                                                      cggcgg.cCGGGGAATGCGGGC.AGCCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCg                                       <  2:3378427/101‑1 (MQ=255)
                                                       ggcggcCC.GGGAAGGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGa                                      <  1:838411/101‑1 (MQ=255)
                                                         gcggccGGGGAATGCGGGC.AGACGGGGCC.GCCCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGaa                                     <  2:4113781/97‑1 (MQ=255)
                                                          cggccGGGGAATGCGGGCG.GACCGGGCC.GCCCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGaaa                                    <  1:1571454/98‑1 (MQ=255)
                                                           gcCCCGGGAATGCGGG.GAGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAg                                   <  1:3199277/101‑1 (MQ=255)
                                                            gcccgggAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAg.g                                 <  2:4305128/97‑1 (MQ=255)
                                                             cccgggAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAa.gg                                >  2:1294960/4‑101 (MQ=255)
                                                               cgggAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAg.gg.gg                             <  2:2330531/100‑1 (MQ=255)
                                                                gggAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAg.gg.ggg                            >  1:1537358/1‑101 (MQ=255)
                                                                gggAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAg.gg.ggg                            >  1:1667160/1‑101 (MQ=255)
                                                                  gAATGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCt                          >  1:681171/1‑101 (MQ=255)
                                                                   aaggCGGGC.AGACCGGGCC.GCCCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTg                         <  1:523671/98‑1 (MQ=255)
                                                                   aaTGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGGC.TGCGGCGCCGCCCGAAGg.gg.gggtgg                         >  1:2133944/1‑98 (MQ=255)
                                                                   aaTGCGGGC.AGACCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTg                         >  1:4641678/1‑101 (MQ=255)
                                                                     tGCGGGC.AGACCGGGCC.GCCCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTgcg                       <  2:1471892/101‑1 (MQ=255)
                                                                           gcagaCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGccc                  <  2:629812/99‑1 (MQ=255)
                                                                           gcagaCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGccc                  <  1:1453850/99‑1 (MQ=255)
                                                                             agaCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGccccc                <  1:2705122/101‑1 (MQ=255)
                                                                             agaCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGccccc                >  1:3364969/1‑101 (MQ=255)
                                                                              gaCCGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGgccccc               >  2:3217434/1‑101 (MQ=255)
                                                                                ccGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCctc             <  2:2446835/101‑1 (MQ=255)
                                                                                 cGGGCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCctct            >  1:1447772/1‑101 (MQ=255)
                                                                                  gggCC.GACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCtt           <  2:1667060/101‑1 (MQ=255)
                                                                                    ggccgACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGGGGGGCGccccccccctg          >  1:3970625/5‑96 (MQ=255)
                                                                                       cgACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTggtc       >  2:1579210/2‑99 (MQ=38)
                                                                                       cgACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTggtc       <  1:182820/100‑3 (MQ=38)
                                                                                        gACCGCCGCCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAGCGGCGGGCGGCGCGcccccccccccgc        >  1:883535/1‑94 (MQ=255)
                                                                                         gcggccgcCTGTC.TCCGCCCTTTTCCCAGCGGAGCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTGGTCcg     <  2:3655546/96‑1 (MQ=37)
                                                                                            gccgcCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTGGTCcgctg  >  1:1398691/3‑99 (MQ=38)
                                                                                            gccgcCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTGGTCcgctg  <  1:329847/99‑3 (MQ=38)
                                                                                            gccgcCTGTC.TCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCC.TGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTGGTCcgctg  <  2:3559641/99‑3 (MQ=38)
                                                                                                      |                                                                                              
CCCGCATTGTGGCCGCCGCGCCCCAGAACGCGCGCCCCGGCCCCTCAAGGATGGCGGCGGCCCGGGGAATGCGGGCGAGACCGGGCCGGACCGGCGCCTGTCTTCCGACCTTTTCCCAGCGGATCCCGCGACGGGGTGCGACGCCTTGCGGCGCCGCCCGAAAG.GG.GGGCTGCGCGCCCCCCTCTTGGGCCGCGC  >  NC_014034/1607840‑1608034

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG