| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,044,270 | Δ1 bp | 90.8% | intergenic (+143/+34) | typA → / ← potG1 | GTP‑binding protein TypA/BipA/polyamine ABC transporter ATP‑binding protein PotG |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,044,270 | 0 | A→. | 90.8% | 52.5 ‑1.2 ‑0.8 | 153 | intergenic (+143/+34) | typA/potG1 | GTP‑binding protein TypA/BipA/polyamine ABC transporter ATP‑binding protein PotG |
| Reads supporting (aligned to +/- strand): new base (115/24): ref base (10/4): total (125/28) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.89e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.58e-01 | ||||||||||
Only 100 of 199 total aligned reads displayed.
CGAATGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAAGGGGGG.CGCGA.AGCCCCCCTTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGC > NC_014034/2044170‑2044367
|
cGAATGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCa < 1:3495665/101‑1 (MQ=255)
gAATGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaa < 1:3294047/101‑1 (MQ=255)
gAATGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaa < 2:2219510/101‑1 (MQ=255)
aaTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaa < 2:1414661/101‑1 (MQ=255)
aaTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaa < 2:2083309/101‑1 (MQ=255)
aaTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaa < 1:2991783/101‑1 (MQ=255)
aaTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaa < 1:1941089/101‑1 (MQ=255)
aaTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCGTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaa < 2:2425749/101‑1 (MQ=255)
aTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaaa < 1:2416357/101‑1 (MQ=255)
aTGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaaa < 2:2988440/101‑1 (MQ=255)
gAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaaaag > 2:1190771/1‑100 (MQ=255)
gAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaaaag < 1:3084560/101‑2 (MQ=255)
aaaTTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCaaaaagg > 2:839227/1‑99 (MQ=255)
aTTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGggg < 1:4512199/101‑1 (MQ=255)
aTTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGggg > 2:4716783/1‑101 (MQ=255)
ttCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggg > 2:2037618/1‑101 (MQ=255)
tCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGggggg > 1:4322292/1‑101 (MQ=255)
cACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggggc > 1:806864/1‑100 (MQ=255)
cACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggggc > 2:2398426/1‑100 (MQ=255)
cACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAGgggggc > 2:4704538/1‑100 (MQ=255)
gccTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGg.cg < 2:4294555/100‑1 (MQ=255)
aCCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGg.cg < 2:4530036/101‑1 (MQ=255)
ccTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGg.cgc > 1:2733528/1‑101 (MQ=255)
cTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGCGGG.AATTTGCACAGC.AAAAAGGGCGG.cgcg > 1:1875149/1‑101 (MQ=255)
tCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGa > 1:3150061/1‑101 (MQ=255)
ccccccGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGa.a > 1:1430404/1‑101 (MQ=255)
ccccccGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGa.a < 1:162070/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGccc < 1:659547/101‑1 (MQ=255)
cGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGcccc < 2:3811841/101‑1 (MQ=255)
ggATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGcccccc > 1:358884/1‑101 (MQ=255)
tatTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCGAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCttt > 2:2741956/1‑101 (MQ=255)
tatTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCttt < 2:4434552/101‑1 (MQ=255)
atTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.ATAAAGGGGGG.CGCGA.AGCCCCCCtttt > 2:56359/1‑101 (MQ=255)
atTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttt > 2:458293/1‑101 (MQ=255)
atTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttt > 2:2476765/1‑101 (MQ=255)
ttGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttttc > 1:522927/1‑100 (MQ=255)
tGAGGCAAGATAAAGACTTGTGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttttcc > 2:312329/1‑99 (MQ=255)
tGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttttcc > 1:910118/1‑99 (MQ=255)
gAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttttccg > 2:3294936/1‑98 (MQ=255)
gAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCCtttttccg > 1:1055919/1‑98 (MQ=255)
gCAAGATAAAGACTTGCGAGGTGTTCTTCATTTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.CGCCCCCC.GTTTTCCGTCa > 2:159231/1‑101 (MQ=255)
cAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAg > 2:4401293/1‑101 (MQ=255)
aGATAAAGCCTTGCGAGGTGTTCTTCATCTTTCTGCAAAGG.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCg < 2:2562772/101‑1 (MQ=255)
aGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCg > 1:2580543/1‑101 (MQ=255)
aTAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGaa > 2:3626346/1‑101 (MQ=255)
tAAAGACTTGCGAGGTGTTCTTCATGTTTCTGCAAAGA.CCGCGGGGGG.AACTTGCAGAGC.AAAAAGTGGGG.GGCGA.AGCGGCCC.TTTTTCCGTCAGCGaaa > 2:2916379/1‑101 (MQ=255)
aaaaGACTGGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGaaa < 2:3152720/100‑1 (MQ=255)
aaggtcTTGCGGGGTTTTTTTCTTTTTTCGGAAAAGC.CCGGGGGGGA.AATTTCCAAAG.AAAAAGGGGGGG.CGC.A.ACCCCCCCCTTTTTCCGTCAGCGAAAc < 2:1958325/96‑1 (MQ=255)
aaaGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAAc > 1:260490/1‑101 (MQ=255)
aaaGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAAc > 1:3052233/1‑101 (MQ=255)
aaGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACa > 2:1751240/1‑101 (MQ=255)
aagctgtggtgtgtTTTTCTTCTTTTTCCAAAAAGCCGGGGGGGGAAATTTGC.CAAAAAAAAGGGGGGG.CCGCC.CCCCCCCCCTTTTTCCGTCAGCGAAAc < 1:1979021/91‑1 (MQ=255)
aCTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCa > 1:1144225/1‑101 (MQ=255)
cTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCAGTCAGCGAAACAGCAc > 1:1506369/1‑101 (MQ=255)
ttGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGAAca > 2:3074823/1‑100 (MQ=255)
cGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGCGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgc < 2:1647260/101‑1 (MQ=255)
gAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAgcg > 1:1690962/1‑101 (MQ=255)
gtttctttATCTTTCAG.AAAGG.CCGGGGGGGG.ATATCGCCAAAGAAAGGGGGGGGG.CGCG..CCCCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGcc < 1:1249937/99‑1 (MQ=255)
gtTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAATCAGCACCAGCGCGCCg > 1:2930938/1‑101 (MQ=255)
tcttcATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCggg > 1:1194237/1‑101 (MQ=255)
tcATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCgc > 2:664903/1‑100 (MQ=255)
cATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGAc > 1:696710/1‑101 (MQ=255)
tCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCa > 1:4290298/1‑101 (MQ=255)
cTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAg > 2:110284/1‑101 (MQ=255)
cTTTCTGCAAAGA.CCGCGGGGGG.AATTTCCACAGCAAAAAA.GGGGG.CGGGA.AGCCCCCC.TTTTTCCGTCGGCGAAACAGCACGAGCGCGCCGCGCGACCAg > 1:3914893/1‑101 (MQ=255)
ttCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGc > 1:460674/1‑101 (MQ=255)
tCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGcc > 1:717605/1‑101 (MQ=255)
tCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGcc > 1:4471471/1‑101 (MQ=255)
tcaaaaAA.CCCCGGGGGG.AATTTGCGCA.AAAAAAAGGGGGG.GGCGAGACCCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGcc < 2:1835011/98‑1 (MQ=255)
gaaaaGC.CCGCGGGGGA.AATTTACACAG.AAAAAGGGGGGG.CGCGA.A.CCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc < 2:1398538/99‑1 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 2:786369/1‑101 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 2:3089260/1‑101 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 1:4356214/1‑101 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 2:1462942/1‑101 (MQ=255)
gCAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc > 2:2212748/1‑101 (MQ=255)
gaaagcgccGGGGGGGA.AATGTCCACAGC.AAAAGGGGGGG.CGAG..ACCCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAcc < 2:4607861/94‑1 (MQ=255)
cAAAGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAccc > 1:3695100/1‑101 (MQ=255)
ggagagcccggggggg.AAAATGCCAAGAAAAAAGGGGGGGCCGCCA.CCCCCCCCTTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCa < 2:4056182/91‑1 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGGGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 1:4534520/1‑101 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAGCCAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 1:4074974/1‑101 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 2:4466188/1‑101 (MQ=255)
aaaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcg > 1:4220900/1‑101 (MQ=255)
aaGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcgc > 2:3424698/1‑101 (MQ=255)
aGA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcgcg > 1:4197945/1‑101 (MQ=255)
gA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCAGCCGCGt > 1:772566/1‑101 (MQ=255)
gA.CCGCGGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGt > 1:4453409/1‑101 (MQ=255)
gcccGGGGGGTG.AATTGGCAAAAC.AAAAAGGGGGG.CCCCC.CCCCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCcgcg < 1:1291232/99‑1 (MQ=255)
cgGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCNGGCCACCCGCGTCTggg > 2:616299/1‑101 (MQ=255)
cgGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTggg > 1:1922128/1‑101 (MQ=255)
cgGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTggg > 1:2307295/1‑101 (MQ=255)
cgGGGGG.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGCGCGACCAGGCCACCCGCGTCTggg > 2:3995601/1‑101 (MQ=255)
ggggg.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTg > 2:3405670/1‑101 (MQ=255)
ggggg.AATTTGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTg > 1:822229/1‑101 (MQ=255)
ggg.AATTTGCACAGC.AAAAGGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGcc < 1:4717039/101‑1 (MQ=255)
tttGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACAt > 1:1794040/1‑101 (MQ=255)
ttGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATc > 1:341063/1‑101 (MQ=255)
tGCACAGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATcc > 1:1893014/1‑101 (MQ=255)
tcacaGC.AAAAAGGGGGG.CGCGA.A.CCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCa < 2:2281517/100‑1 (MQ=255)
cacaGC.AAAAAGGGGGG.CGCGA.AGCCCCCC.TTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAg > 1:2279217/1‑101 (MQ=255)
cacaGC.AAAAAGGGGGG.CGC.A.AACCCCCCCTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAg < 2:275621/101‑1 (MQ=255)
|
CGAATGAAATTCACCTCCCCCCGGGATATTTGAGGCAAGATAAAGACTTGCGAGGTGTTCTTCATCTTTCTGCAAAGA.CCGCGGGGGG.AATTTGCACAGCAAAAAAGGGGGG.CGCGA.AGCCCCCCTTTTTTCCGTCAGCGAAACAGCACCAGCGCGCCGGGCGACCAGGCCACCCGCGTCTGGGTGCCGACATCCAGC > NC_014034/2044170‑2044367
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|