| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,331 | +A | 1.9% | intergenic (‑127/‑178) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,331 | 2 | .→A | 1.9% | 7.5 0.0 ‑0.3 | 213 | intergenic (‑127/‑178) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (2/2): ref base (96/113): total (98/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.29e-01 | ||||||||||
Only 100 of 232 total aligned reads displayed.
ATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGT > NC_014034/2249233‑2249430
|
tGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...gggg..gg < 1:4465017/101‑1 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGc > 1:1688696/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCt > 1:4324153/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCt > 1:3924561/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCt > 1:3122530/1‑101 (MQ=255)
acaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCtt > 2:1077866/1‑101 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCttt < 2:4441165/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 2:3300152/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTc > 1:3060102/1‑101 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCAt < 1:1839708/101‑1 (MQ=255)
tACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATc > 1:3635466/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 2:2447652/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 2:3535093/101‑1 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCtt < 2:2929773/101‑1 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCtt < 1:1730877/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg < 1:522966/101‑1 (MQ=255)
cAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGcc < 2:1224722/101‑1 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa > 1:1738481/1‑101 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa > 2:2955988/1‑101 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 1:2093568/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 1:765147/101‑1 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAata < 1:3749929/101‑1 (MQ=255)
gCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAatat > 2:1573555/1‑101 (MQ=255)
gCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAatat < 2:808356/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATc > 2:2456024/1‑101 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATc < 1:2507587/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATcg < 1:1446144/101‑2 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATcc < 2:447138/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 2:3666721/101‑1 (MQ=255)
ggggCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggg < 1:909655/101‑1 (MQ=255)
ggggCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggg < 2:2131654/101‑1 (MQ=255)
gCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggggg < 2:219761/101‑1 (MQ=255)
cAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggggg > 1:841037/1‑100 (MQ=255)
aagaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg > 2:4170689/1‑101 (MQ=255)
aagaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg < 2:1187929/101‑1 (MQ=255)
gaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:2897477/101‑1 (MQ=255)
gaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:3559251/101‑1 (MQ=255)
aagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaag > 1:1350309/1‑100 (MQ=255)
agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg < 1:2222555/101‑1 (MQ=255)
agGGGCCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGT.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg < 1:4413950/101‑1 (MQ=38)
ggggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 1:1297624/101‑1 (MQ=255)
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcg > 1:4157999/1‑101 (MQ=255)
ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc < 1:110420/101‑1 (MQ=255)
gCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa < 2:3136736/101‑1 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 2:3472424/101‑1 (MQ=255)
tctgcccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gc > 1:264106/6‑101 (MQ=255)
cttcccccGTCCCGTGCCGGGTCT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 1:4425168/97‑1 (MQ=255)
cccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCaga > 2:4300532/2‑101 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATCTCGCGGGGTGTGAA.TGGCGCA..GCCagag < 2:3586635/101‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg > 1:2206632/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:45967/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAgggg > 2:2556298/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg < 2:1738376/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:3880444/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:1634417/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 2:3214748/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:285407/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg > 2:2785752/1‑101 (MQ=255)
cgcaagcggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg < 2:4734452/94‑1 (MQ=18)
gcaagcggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 2:4360232/95‑1 (MQ=18)
tGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg > 2:82292/1‑101 (MQ=255)
gCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg.c > 1:233057/1‑101 (MQ=255)
ccGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cc > 1:3550859/1‑101 (MQ=255)
gcggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgc < 1:991578/99‑1 (MQ=18)
ccattcaccccccGGG.ATATTTTCGGCAAGATGAA...AGCC..CCCCTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCATAGGGGGGCAGCG.cc > 2:3809676/9‑101 (MQ=11)
gggACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccc > 2:2239127/1‑101 (MQ=255)
gACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccc > 1:4029250/1‑100 (MQ=255)
actccccccGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAGCG.ccc < 2:412404/97‑1 (MQ=17)
cT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccctt < 1:3889935/101‑4 (MQ=255)
cT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccctt > 1:358914/1‑98 (MQ=255)
t.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccccccttc < 1:1557905/101‑5 (MQ=255)
cccccccGGGAATTTTGGAGGAAAGAGGAG...GGGG..GGTTTTCTTTTTGCAAAAATTACCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.cccccct < 1:3981906/99‑3 (MQ=12)
cccccGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccccccttcg < 2:677650/101‑6 (MQ=255)
cccccGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccccccttcg < 1:4528552/101‑6 (MQ=255)
ccccGGG.ATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCCCCtg > 2:4647477/1‑100 (MQ=0)
ccGGG.ATATTTGAGGCAAGATGAA...GGGG..TGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCgcgg < 2:305186/101‑1 (MQ=255)
ccGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCgcgg < 2:607886/101‑1 (MQ=255)
cGGG.ATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCCCCtgccc > 2:2731666/1‑97 (MQ=0)
cGGG.ATATTTGAGGCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCgcggg < 2:180712/101‑1 (MQ=255)
ggg.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCgcgggc > 2:487361/1‑101 (MQ=255)
gg.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCgcgggcg > 1:2113736/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCACCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGggcggc > 1:4206156/1‑101 (MQ=255)
tatTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGcc < 1:3167913/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGccc > 1:106802/1‑100 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcg < 2:324920/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcg > 2:1946907/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCcgc > 1:277983/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGa > 1:3362466/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGAc < 1:1953156/101‑1 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACgcgcgc > 1:3305551/1‑101 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGGGGCCGCGACGCGggccg > 1:2914682/1‑101 (MQ=25)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGcgccg < 2:1350217/101‑1 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGcgccg > 2:3922272/1‑101 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGccccac > 2:3969880/1‑99 (MQ=255)
a...GGGG..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:637770/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:334307/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 1:2704383/1‑101 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:2747345/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 1:2461999/1‑101 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg > 2:4531718/1‑101 (MQ=255)
|
ATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGT > NC_014034/2249233‑2249430
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|