BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,678,904	+A	2.6%	intergenic (+33/+54)	RCAP_rcc02495 → / ← RCAP_rcc02496	GTPase, EngC family/group 1 glycosyl transferase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,678,904	1	.→A	2.6%	2.7 0.0 ‑1.0	115	intergenic (+33/+54)	RCAP_rcc02495/RCAP_rcc02496	GTPase, EngC family/group 1 glycosyl transferase
Reads supporting (aligned to +/- strand): new base (1/1): ref base (64/48): total (65/50)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.34e-02

Only 100 of 157 total aligned reads displayed.


GCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.C.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAGCCGC  >  NC_014034/2678804‑2679003


gcgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.ccc                                                                                                      >  2:1925801/1‑101 (MQ=255)


 cgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.cccc                                                                                                     >  1:147826/1‑100 (MQ=255)


 cgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.cccc                                                                                                     >  1:499256/1‑100 (MQ=255)


  gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGGAT.CG.c.cccca                                                                                                    >  2:3224085/1‑99 (MQ=255)


  gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.cccca                                                                                                    <  1:4654388/101‑3 (MQ=255)


  gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.cccca                                                                                                    >  1:2363889/1‑99 (MQ=255)


  gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATACCGGCTGCGCGGCGACTGAGGCAGGTTCGGGGGCCGGTGCGGGCCT.CG.c.cccca                                                                                                    >  1:2540530/1‑99 (MQ=255)


     cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.ccccaccg                                                                                                 >  1:3607856/1‑96 (MQ=255)


     cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.c.ccccaccg                                                                                                 >  1:2317697/1‑96 (MQ=255)


      gcgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACcgc                                                                                                >  1:3816691/1‑101 (MQ=255)


      gcgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACcgc                                                                                                <  2:2379510/101‑1 (MQ=255)


      gcgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACcgc                                                                                                <  1:4262986/101‑1 (MQ=255)


        gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCgcgc                                                                                              <  1:730065/101‑1 (MQ=255)


        gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCgcgc                                                                                              >  1:1877603/1‑101 (MQ=255)


        gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.C.CCC.ACCGCGcc                                                                                             <  2:3398502/101‑1 (MQ=255)


           ttCGGCAAGATGCCCCGGGCGGCGCTCCGCGACAAATCCCGGCTGCGCGGCGACTGACGCGGGTTCGGGGGCCGGTGGGGGCATCCC.C.CCC.ACCGCGCCCg                                                                                           <  2:4226684/101‑1 (MQ=255)


               gCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.CGCCC.ACCGCGCCCGAcgc                                                                                       >  2:3861271/1‑101 (MQ=255)


                cAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGAcgcg                                                                                      >  2:2737782/1‑101 (MQ=255)


                cAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGAcgcg                                                                                      >  1:1300528/1‑101 (MQ=255)


                cAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGAcgcg                                                                                      >  2:2164301/1‑101 (MQ=255)


                cAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGAcgcg                                                                                      >  2:3981331/1‑101 (MQ=255)


                cAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGAGGCAT.CGCC.CCC.ACCGCGCCCGAcgcg                                                                                      >  2:3282792/1‑101 (MQ=255)


                 aaGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGGCTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGAcgcgc                                                                                     >  1:1909941/1‑101 (MQ=255)


                 aaGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.C.CCCAACCGCGCCCGAcgcgc                                                                                     >  2:1565515/1‑101 (MQ=255)


                   gATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCgcgg                                                                                   >  1:1550732/1‑101 (MQ=255)


                      gACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGcggcgg                                                                                >  2:1837732/1‑101 (MQ=255)


                       cccggggCGCCGCGGGGGGACAACCCCCGGCGGCGGGGCGCTGGGCGCGGGTCGGGGGGCGGGGGGGGGCAC.CGCC.CCC.CCCGCGCCCGACGCGCGGCggg                                                                               <  1:982576/97‑1 (MQ=2)


                         ccGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCt                                                                             >  2:4187486/1‑101 (MQ=255)


                          cGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.CCCGCGCCCGACGCGCGGCGGGCtt                                                                            >  2:3111403/1‑101 (MQ=255)


                          cGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCtt                                                                            <  1:1203284/101‑1 (MQ=255)


                          cGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCtt                                                                            <  2:495223/101‑1 (MQ=255)


                           gggCGGCCCGGCGCGACAACCCCCGGCTGGGCGGCGACTGACGCGGGTCGGGGGGCGGGGGGGGGCATCCC.C.CCC.CCCGCGCCCGACGCGCGGCGGGCTTg                                                                           <  1:3861513/101‑1 (MQ=16)


                             gcggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTgcc                                                                         <  2:4211422/101‑1 (MQ=255)


                              cggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTgccc                                                                        >  1:3756503/1‑101 (MQ=255)


                               ggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTgcccg                                                                       >  2:632523/1‑101 (MQ=255)


                               atttcatcgcgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.CCCGCGCCCGACGCGCGGCGGGCTTgcccc                                                                       >  2:4188739/8‑100 (MQ=37)


                                   cTGCGCGACAAACCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAC.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCa                                                                   <  1:4674551/101‑1 (MQ=37)


                                     gcgcGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCCag                                                                 >  1:970283/1‑101 (MQ=255)


                                       gcgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAagga                                                               <  2:3748653/101‑1 (MQ=255)


                                       gcgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAagga                                                               >  2:3060985/1‑101 (MQ=255)


                                        cgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggag                                                              <  2:4400151/101‑1 (MQ=255)


                                        cgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggag                                                              <  2:303440/101‑1 (MQ=255)


                                         gACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCCaggagg                                                             >  1:1711452/1‑101 (MQ=255)


                                           cAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgc                                                           >  2:1616578/1‑101 (MQ=255)


                                            aaaTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcg                                                          >  2:1181868/1‑101 (MQ=255)


                                            aaaTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcg                                                          >  2:3533230/1‑101 (MQ=255)


                                             aaTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcgc                                                         >  1:4565015/1‑101 (MQ=255)


                                                cccGGCTGCGCGGCGACTGCCGCCGGTTCGGGGGCCGGGGGGGGCAT.CGCC.CCC.ACCGCGCCCGAGGCGCGGCGGGCCTGCCCGCCCAAGGAGGGAGgccc                                                      >  2:1395533/1‑101 (MQ=25)


                                                 ccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccccc                                                     <  1:2634220/101‑1 (MQ=255)


                                                   ggCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCCAGGAGGGCGCCCCCgg                                                   >  2:132054/1‑101 (MQ=255)


                                                    gCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGa                                                  >  2:3069654/1‑101 (MQ=255)


                                                     gtGCGCGGGGCCTGACGCCGGTTCGGGGGCGGGTGGGGGCCTCCC.C.CCC.CCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAt                                                 <  1:4313720/100‑1 (MQ=21)


                                                     cTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAt                                                 <  2:3742993/101‑1 (MQ=255)


                                                     cTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGACCGCCCAAGGAGGGCGCCCCCCGAt                                                 >  2:612829/1‑101 (MQ=25)


                                                         gcggcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtctcc                                             >  1:312998/1‑100 (MQ=255)


                                                         gcggcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCa                                             <  2:3548694/101‑1 (MQ=255)


                                                         gcggcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCa                                             >  1:2979093/1‑101 (MQ=255)


                                                         gcggcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCa                                             <  2:3488772/101‑1 (MQ=255)


                                                          cggcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAg                                            >  1:788566/1‑101 (MQ=255)


                                                           ggcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgc                                           >  2:2656480/1‑101 (MQ=255)


                                                           ggcgACTGACGCCGGTGCAGGGGAAGGTGGGGGCAA.CGCC.CCC.ACGGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgc                                           <  1:3893529/101‑1 (MQ=18)


                                                            gcgACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGGTCTCAgcg                                          >  2:4484765/1‑101 (MQ=255)


                                                              gccTGGCGCCGGTTCGGGGGCCGGTGGGGGCATCCC.C.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa                                        <  2:2006223/99‑1 (MQ=25)


                                                              gACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa                                        <  1:3022269/101‑1 (MQ=255)


                                                              gACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa                                        <  2:4598356/101‑1 (MQ=255)


                                                              gACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa                                        <  2:1300436/101‑1 (MQ=255)


                                                              gACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.C.CCCAACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa                                        <  1:1565616/101‑1 (MQ=255)


                                                                cTGCCGCGGGTTCGGGGGCGGGGGGGGGCATCCC.C.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAAc                                      <  1:144526/101‑1 (MQ=21)


                                                                cTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAAc                                      <  1:544663/101‑1 (MQ=255)


                                                                 tGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACg                                     >  1:627062/1‑101 (MQ=255)


                                                                  gACGCCGGTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGCCGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACgg                                    >  2:1735554/1‑100 (MQ=255)


                                                                     gCCGTTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgcc                                 <  2:3702713/101‑1 (MQ=255)


                                                                        ggTTCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgcc                              >  1:3947730/1‑101 (MQ=255)


                                                                         ggtCGGGGGCCGGTGGGGACAC.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGTCCCCGGATCTCAGCGCAACGTGccgccc                             <  2:1550631/99‑1 (MQ=25)


                                                                          tgggggggGCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgcccg                            <  1:1837844/98‑1 (MQ=25)


                                                                           tCGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGCCGCGCGGCGGGCTTGCCCGCCCAAGGCGGGCGCCCCCGGCTCTCCGCGCCACGGGccgcccgc                           >  1:3390282/1‑101 (MQ=21)


                                                                            cGGGGGCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc                          >  2:4391846/1‑101 (MQ=255)


                                                                             gggggCCGGTGGGGCCATCCC.C.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCccgccg                         <  1:4423496/101‑1 (MQ=37)


                                                                              ggggCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCccgccgc                        >  2:867572/1‑100 (MQ=255)


                                                                              ggggCCGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCCCCGt                        >  1:1951821/1‑101 (MQ=255)


                                                                                  gcGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCg                    <  2:2351388/100‑1 (MQ=255)


                                                                                  ccGGTGGGGGCATCCC.C.CCC.CCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCg                    <  1:2934260/101‑1 (MQ=25)


                                                                                  ccGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCg                    >  1:955329/1‑101 (MQ=255)


                                                                                  ccGGTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCg                    <  1:2053874/101‑1 (MQ=255)


                                                                                     gTGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACa                 <  1:2143667/101‑1 (MQ=255)


                                                                                      tGGGGGCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaa                >  1:897644/1‑101 (MQ=255)


                                                                                       gggggCAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaaa               <  1:2359894/101‑1 (MQ=255)


                                                                                          ggcctccccc.ccc.CCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGc             <  1:1735659/92‑1 (MQ=37)


                                                                                            cAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGa          >  2:4652432/1‑101 (MQ=255)


                                                                                            cAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGCCTCGACACAGCGGa          >  1:1983056/1‑101 (MQ=37)


                                                                                            cAT.CGCC.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAGCTCAGCGCAACGTGCCGCCCGCGGGCTCGACAAAggcga          >  2:138462/1‑97 (MQ=25)


                                                                                              atcgcc.ccc.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGAt         >  1:3262702/6‑101 (MQ=255)


                                                                                               tcgcc.ccc.CCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATc        <  1:4598964/97‑1 (MQ=255)


                                                                                               tcgcc.ccc.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATc        >  2:3995568/5‑101 (MQ=255)


                                                                                                 gcc.ccc.CCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAg      <  2:4682894/99‑1 (MQ=255)


                                                                                                 ccc.ccc.CCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAg      <  2:3775142/99‑1 (MQ=255)


                                                                                                  cc.ccc.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAGc     >  1:3241089/2‑101 (MQ=255)


                                                                                                   c.ccc.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAGcc    <  2:1450938/101‑1 (MQ=255)


                                                                                                     ccc.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAGCcg   >  1:3062224/1‑101 (MQ=255)


                                                                                                      cc.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAGCcgc  >  2:142951/1‑101 (MQ=255)


GCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGCCGGTGGGGGCAT.CG.C.CCC.ACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGATCAGCCGC  >  NC_014034/2678804‑2679003

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 23 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG