New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1338521	277 (1.230)	4 (0.020)	2/190	31.8	0.02	coding (1180/2610 nt)	res	type III restriction‑modification system RcaSBIIP Res subunit
	?	NC_014034	= 2316463	155 (0.650)					coding (230/984 nt)	RCAP_rcc02149	hypothetical protein
Rejected: Position hash score below cutoff.

CCCATCATGCTGGTGCAGGTGGAGCGGACGGGAAAGGATCAGCGCGACGGGGTGCATATCCACGCCGAAGACGTGAAGGAATGGCTGCTGCAAGCGGGGCTGG....................................................................................................  >  NC_014034/1338419‑1338521 ..................................................................................................GCTGGTCGAGACGCTGAACCGGGCGCTGGAACGCGCGATCGGGCAGACGGGGGCAAAACCGCAGACGAATGCGCTGATCGCGCCCGCGGCGGCGCCCGCGCCCTC  <  NC_014034/2316463‑2316364                                                                                                                                                                                                                  CATGCTGGTGCAGGTGGAGCGGACGGGAAAGGATCAGCGCGACGGGGTGCACATCCACGCCGAAGACGTGAAGGAATGGCTGCTGCAAGCGGGGCTGGGCG                                                                                                   >  1:3248408/1‑101 (MQ=255)        TGCTGGTGCAGGTGGAGCGGACGGGAAAGGATCAGCGCGACGGGGGGCATATCCACGCCGAAGACGTGAAGGAATGGCTGCTGCAAGCGGGGCTGGGCGgg                                                                                                 >  1:4383313/1‑99 (MQ=255)                                                          ATCCACGCCGAAGACGTGAAGGAATGGCTGCTGCAAGCGGGGCTGGTCGAGACGCTGAACCGGGCGCTGGAACGCGCGATCGGGCAGACGGGGGCAAAACC                                               >  1:1472527/1‑101 (MQ=255)                                                                           GAAGGAATGGCTGCTGCAAGCGGGGCTGGTCGAGACGCTGAACCGGGCGCTGGAACGCGCGATCGGGCAGACGGGGGCAAAACCGCAGACGAATGCGCTGA                              <  2:1472433/101‑1 (MQ=255)                                                                                                                                                                                                             CCCATCATGCTGGTGCAGGTGGAGCGGACGGGAAAGGATCAGCGCGACGGGGTGCATATCCACGCCGAAGACGTGAAGGAATGGCTGCTGCAAGCGGGGCTGG....................................................................................................  >  NC_014034/1338419‑1338521 ..................................................................................................GCTGGTCGAGACGCTGAACCGGGCGCTGGAACGCGCGATCGGGCAGACGGGGGCAAAACCGCAGACGAATGCGCTGATCGCGCCCGCGGCGGCGCCCGCGCCCTC  <  NC_014034/2316463‑2316364 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG