New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396131	146 (0.910)	25 (0.160)	2/136	26.7	0.14	coding (13/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	1396166 =	150 (0.630)					coding (48/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

GTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT........................................................................  >  NC_014034/1396088‑1396131 ............................................................................CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGA  >  NC_014034/1396166‑1396205                                             ||||||||||||||||||||||||||||||||                                         tggaacaggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGG                 <  2:4731262/91‑1 (MQ=0) tggaacaggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGG                 <  1:1642262/91‑1 (MQ=0) tggaacaggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGG                 <  2:3084291/91‑1 (MQ=0) tggaacaggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGG                 <  2:1926048/91‑1 (MQ=0)   gaacaggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGAT               <  1:3163728/93‑1 (MQ=0)   gaacaggaTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGAT               <  2:4196323/93‑1 (MQ=0)      caggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGA            <  2:418461/96‑1 (MQ=1)      caggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGA            <  2:1680610/96‑1 (MQ=1)       aggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA           <  2:4311944/97‑1 (MQ=1)       aggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCCCGGGGGCGGGGATCGAA           >  2:2513342/5‑101 (MQ=0)       aggaTGTCGCGCCCCCCGCGGGGGCGTAGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA           <  1:1994921/97‑1 (MQ=0)       aggaTGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA           <  1:1355592/97‑1 (MQ=2)        ggaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA          <  1:2634268/98‑1 (MQ=1)         gaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC         <  2:1324467/99‑1 (MQ=1)         gaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC         <  2:116664/99‑1 (MQ=1)         gaTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC         <  1:706452/99‑1 (MQ=1)          aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAAag        >  1:549027/2‑99 (MQ=0)           TGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgg       <  1:2245721/101‑3 (MQ=1)            GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACggg      <  1:3243768/101‑4 (MQ=0)             TCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgggt     <  1:4107686/101‑5 (MQ=1)             TCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgggt     <  1:2719216/101‑5 (MQ=1)              CGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACggggc    >  2:4744448/1‑96 (MQ=1)               gcgCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgggtcg   <  2:3018096/98‑7 (MQ=0)               GCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgggtcg   <  2:548976/101‑7 (MQ=0)                CTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACGGGGCGA  >  1:153995/1‑101 (MQ=0)                                             ||||||||||||||||||||||||||||||||                                         GTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT........................................................................  >  NC_014034/1396088‑1396131 ............................................................................CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGA  >  NC_014034/1396166‑1396205 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG