New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396166 =	150 (0.930)	26 (0.160)	2/136	26.7	0.15	coding (48/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	= 1397400	152 (0.640)					coding (1282/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

TCGCCGGGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG............................................................................  <  NC_014034/1396205‑1396166 ........................................................................AGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGTCCGTCTGGC  <  NC_014034/1397400‑1397357                                         ||||||||||||||||||||||||||||||||                                             TCGCCCCGTTTCGATCCCCGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAG                 <  1:153995/101‑1 (MQ=0)  cgacccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGCGC                >  2:3018096/7‑101 (MQ=0)  cgacccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGC                >  2:548976/7‑101 (MQ=0)   gccccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCG               <  2:4744448/96‑1 (MQ=1)    acccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGA              >  1:2719216/5‑101 (MQ=1)    acccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGA              >  1:4107686/5‑101 (MQ=1)     cccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGGGCGAC             >  1:3243768/4‑101 (MQ=0)      ccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACa            >  1:2245721/3‑100 (MQ=1)       ctTTTCGACCCCCGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACat           <  1:549027/99‑3 (MQ=0)        GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATC          >  1:706452/1‑101 (MQ=1)        GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATC          >  2:116664/1‑101 (MQ=1)        GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATC          >  2:1324467/1‑101 (MQ=1)         TTTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCC         >  1:2634268/1‑101 (MQ=1)          TTCGATCCCCGCCCCCGGGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCt        <  2:2513342/101‑2 (MQ=0)          TTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATGGTTTCGATCCACGCCCCCGCGGGGGGAGGGACATCCt        >  1:1355592/1‑100 (MQ=2)          TTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCTACGCCCCCGCGGGGGGCGCGACATCCt        >  1:1994921/1‑100 (MQ=0)          TTCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCt        >  2:4311944/1‑100 (MQ=1)           TCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtg       >  2:1680610/1‑99 (MQ=1)           TCGATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtg       >  2:418461/1‑99 (MQ=1)              ATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGGGCGACATCCtgttc    >  2:4196323/1‑96 (MQ=0)              ATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGCCATCCtgttc    >  2:933257/1‑96 (MQ=0)              ATCCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtgttc    >  1:3163728/1‑96 (MQ=0)                CCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtgttcca  >  2:1926048/1‑94 (MQ=0)                CCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtgttcca  >  2:3084291/1‑94 (MQ=0)                CCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtgttcca  >  2:4731262/1‑94 (MQ=0)                CCACGCCCCCGCGGGGGGAGCGACGATAGCCCGCCGTGAACTCGGTCGAGCCAGCATAGTTTCGATCCACGCCCCCGCGGGGGGAGCGACATCCtgttcca  >  1:1642262/1‑94 (MQ=0)                                         ||||||||||||||||||||||||||||||||                                             TCGCCGGGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG............................................................................  <  NC_014034/1396205‑1396166 ........................................................................AGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGTCCGTCTGGC  <  NC_014034/1397400‑1397357 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG