New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396679	187 (1.050)	29 (0.160)	11/150	20.4	0.14	coding (561/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	1396902 =	181 (0.760)					coding (784/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

GATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG......................................................................  >  NC_014034/1396631‑1396679 ..........................................................................CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC  >  NC_014034/1396902‑1396946                                                  |||||||||||||||||||||||||                                              cctcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGAT                    <  1:1379118/93‑1 (MQ=0)  ctcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATC                   <  2:672123/94‑1 (MQ=0)   tcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG                  <  1:1877516/95‑1 (MQ=0)   tcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG                  <  1:3367852/95‑1 (MQ=0)   tcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG                  <  1:813965/95‑1 (MQ=0)   tcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG                  <  1:4293659/95‑1 (MQ=0)   ccgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG                  <  2:820492/95‑1 (MQ=0)    cgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGGGTGGATCGA                 >  2:1401152/6‑101 (MQ=0)    cgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGA                 >  1:3631168/6‑101 (MQ=0)     gcccGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                <  1:749279/97‑1 (MQ=0)     gcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                >  1:344841/5‑101 (MQ=0)     gcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                <  2:3131808/97‑1 (MQ=0)     gcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                <  2:4294123/97‑1 (MQ=0)     gcaaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                <  1:625392/97‑1 (MQ=0)      cacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA               <  2:2223266/98‑1 (MQ=0)      cacGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA               <  1:3398490/98‑1 (MQ=0)       acGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC              >  2:4566042/3‑101 (MQ=1)         GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTAGCTCCCCCCGCGGGGGCGTGGATCGAAACtg            >  2:2257579/1‑99 (MQ=0)          TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGC           >  2:4592663/1‑101 (MQ=0)          TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGC           <  2:3063711/101‑1 (MQ=0)           CGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCg          >  2:634501/1‑100 (MQ=0)            GCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgggg         >  2:474478/1‑96 (MQ=0)              TCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGC       >  2:2490442/1‑101 (MQ=2)              TCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGC       >  2:1389211/1‑101 (MQ=2)              TCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGC       >  1:4135283/1‑101 (MQ=2)               CCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCG      <  1:2019122/101‑1 (MQ=9)                CCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGC     <  1:4289501/101‑1 (MQ=255)                 CCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGCG    >  2:684512/1‑101 (MQ=255)                   CCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGCGcc  <  2:1993593/101‑3 (MQ=255)                                                  |||||||||||||||||||||||||                                              GATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG......................................................................  >  NC_014034/1396631‑1396679 ..........................................................................CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC  >  NC_014034/1396902‑1396946 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG