New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 202126 =236 (1.080)2 (0.010) 2/184 31.3 0.01 coding (1113/1230 nt) kpsE1 capsule polysaccharide export inner‑membrane protein KpsE
?NC_014034 = 1761718 192 (0.810)coding (149/1173 nt) dxr 1‑deoxy‑D‑xylulose‑5‑phosphate reductoisomerase
Rejected: Position hash score below cutoff.

TCGCGCAGACTGTAGAAGATCAGCACGCAGATCGACCAGGCCAGCGTCAGGAACACCGCCGTCAGCCCGGCAATCAGACCGCGTTGCGGATAGGTCGAGGCCTCGGCC....................................................................................................  <  NC_014034/202233‑202126
....................................................................................................CCTCGGCCCGGAAAGCCCGCGCCTGTTCGGCCAGAAGCTTGATGTTGCGCCCCCCGGACAGGGCCACCACCTGAAAGGCCCCCGGACGACGGGCGATCAGGTCAAGCG  <  NC_014034/1761718‑1761619
                                                                                                                                                                                                                
                                                               AGCCCGGCAATCAGACCGCGTTGCGGATAGGTCGAGGCCTCGGCCCGGAAAGCCCGCGCCTGTTCGGCCAGAAGCTTGATGTTGCGCCCCCCGGACAGGGC                                              >  2:1321629/1‑101 (MQ=255)
                                                                           AGACCGCGTTGCGGATAGGTCGAGGCCTCGGCCCGGAAAGCCCGCGCCTGTTCGGCCAGAAGCTTGATGTTGCGCCCCCCGGACAGGGCCACCACCTGAAA                                  <  1:1321721/101‑1 (MQ=255)
                                                                                                                                                                                                                
TCGCGCAGACTGTAGAAGATCAGCACGCAGATCGACCAGGCCAGCGTCAGGAACACCGCCGTCAGCCCGGCAATCAGACCGCGTTGCGGATAGGTCGAGGCCTCGGCC....................................................................................................  <  NC_014034/202233‑202126
....................................................................................................CCTCGGCCCGGAAAGCCCGCGCCTGTTCGGCCAGAAGCTTGATGTTGCGCCCCCCGGACAGGGCCACCACCTGAAAGGCCCCCGGACGACGGGCGATCAGGTCAAGCG  <  NC_014034/1761718‑1761619

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG