New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2307288 =167 (0.770)2 (0.010) 2/182 31.1 0.01 coding (287/2808 nt) RCAP_rcc02139 methyl‑accepting chemotaxis protein
?NC_014034 2359593 = 156 (0.660)coding (1347/1689 nt) RCAP_rcc02187 amidohydrolase
Rejected: Position hash score below cutoff.

CGCTTTCGGGCGCGACCGGGGATCTGGCGCAGGCGATGGTCGACATTCTTTCGGCCGGAACGCCCGGGGATCTGCAGGCGGCGCGACAGCACCTGCAGCGGACGCTGGC....................................................................................................  <  NC_014034/2307396‑2307288
....................................................................................................GACGCTGGCAACCCGCGGCGGCGCGCCCATCGCCTATTCCAGCGACTGGCCGGTGACCGATGTCTCGGTGCTGCGCGGCATCCATGCCGGGGTGACGCGGACCCCGTTC  >  NC_014034/2359593‑2359692
                                                                                                                                                                                                                 
                                 CGATGGTCGACATTCTTTCGGCCGGAACGCCCGGGGATCTGCAGGCGGCGCGACAGCACCTGCAGCGGACGCTGGCAACCCGCGGCGGCGCGCCCATCGCC                                                                             >  1:890041/1‑101 (MQ=255)
                                                TTTCGGCCGGAACGCCCGGGGATCTGCAGGCGGCGCGACAGCACCTGCAGCGGACGCTGGCAACCCGCGGCGGCGCGCCCATCGCCTATTCCAGCGACTGG                                                              <  2:889967/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CGCTTTCGGGCGCGACCGGGGATCTGGCGCAGGCGATGGTCGACATTCTTTCGGCCGGAACGCCCGGGGATCTGCAGGCGGCGCGACAGCACCTGCAGCGGACGCTGGC....................................................................................................  <  NC_014034/2307396‑2307288
....................................................................................................GACGCTGGCAACCCGCGGCGGCGCGCCCATCGCCTATTCCAGCGACTGGCCGGTGACCGATGTCTCGGTGCTGCGCGGCATCCATGCCGGGGTGACGCGGACCCCGTTC  >  NC_014034/2359593‑2359692

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG