New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2430196 =167 (0.760)2 (0.010) 2/186 31.4 0.01 coding (804/2694 nt) kdpD sensor protein KdpD
?NC_014034 2853444 = 226 (0.950)coding (1820/2034 nt) RCAP_rcc02662 class II aldolase/adducin N‑terminal domain‑containing protein/short‑chain dehydrogenase/reductase family oxidoreductase
Rejected: Position hash score below cutoff.

CCTCGCTCGCGCGCCGGTCCGGTTGCGCCGGATCGCCGGGCGGCGCCAGCAGGAGCGCGATCCAGTCCGCATTCAGCGCCGAGGCCAGCCGTGCCGTCTGCCGGATC....................................................................................................  <  NC_014034/2430302‑2430196
....................................................................................................CCGGATCCGGTCGGCATTGATCCCGTTGACCCGGATGCCTTCGGGCCCCAGTTCCAGCGCCAGTTGCCGCAACAGGAAGAAGCTCGTCGCCTTCGGCAACCCGTAGG  >  NC_014034/2853444‑2853543
                                                                                                                                                                                                               
                           ctGGATCGCCGGGCGGCGCCAGCAGGAGCGCGATCCAGTCCGCATTCAGCGCCGAGGCCAGCCGTGCCGTCTGCCGGATCCGGTCGGCATTGATCCCGTTG                                                                                 <  2:848520/99‑1 (MQ=255)
                             GGATCGCCGGGCGGCGCCAGCAGGAGCGCGATCCAGTCCGCATTCAGCGCCGAGGCCAGCCGTGCCGTCTGCCGGATCCGGTCGGCATTGATCCCGTTGAg                                                                               >  1:848594/1‑100 (MQ=255)
                                                                                                                                                                                                               
CCTCGCTCGCGCGCCGGTCCGGTTGCGCCGGATCGCCGGGCGGCGCCAGCAGGAGCGCGATCCAGTCCGCATTCAGCGCCGAGGCCAGCCGTGCCGTCTGCCGGATC....................................................................................................  <  NC_014034/2430302‑2430196
....................................................................................................CCGGATCCGGTCGGCATTGATCCCGTTGACCCGGATGCCTTCGGGCCCCAGTTCCAGCGCCAGTTGCCGCAACAGGAAGAAGCTCGTCGCCTTCGGCAACCCGTAGG  >  NC_014034/2853444‑2853543

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG