| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 2546138 = | 267 (1.200) | 2 (0.010) | 2/188 | 31.6 | 0.01 | intergenic (‑167/‑71) | RCAP_rcc02373/RCAP_rcc02374 | monosacharide ABC transporter periplasmic monosacharide‑binding protein/LacI family transcriptional regulator |
| ? | NC_014034 | 2546172 = | 275 (1.160) | intergenic (‑201/‑37) | RCAP_rcc02373/RCAP_rcc02374 | monosacharide ABC transporter periplasmic monosacharide‑binding protein/LacI family transcriptional regulator | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GGGCGCTTGCGGCCGGGGCCAAGGGTGTCGGTCATGCTTTCCCGTCATGTTGTCATCTTCCATCTTGACGTGAATCGAAACCGGATGCAATTCTGCTTCATCGATT.................................................................................................... < NC_014034/2546243‑2546138
....................................................................................................TCGATTCACGTCAAGATGGAAGATGACAACATGACGGGAAAGCATGACCGACACCCTTGGCCCCGGCCGCAAGCGCCCCACGATCTATGACCTGGCCGAACGGGCG > NC_014034/2546172‑2546271
CGGTCATGCTTTCCCGTCATGTTGTCATCTTCCATCTTGACGTGAATCGAAACCGGATGCAATTCTGCTTCATCGATTCACGTCAAGATGGAAGATGACAA > 1:3624990/1‑101 (MQ=255)
ATGCTTTCCCGTCATGTTGTCATCTTCCATCTTGACGTGAATCGAAACCGGATGCAATTCTGCTTCATCGATTCACGTCAAGATGGAAGATGACAACATGA < 2:3624771/101‑1 (MQ=255)
GGGCGCTTGCGGCCGGGGCCAAGGGTGTCGGTCATGCTTTCCCGTCATGTTGTCATCTTCCATCTTGACGTGAATCGAAACCGGATGCAATTCTGCTTCATCGATT.................................................................................................... < NC_014034/2546243‑2546138
....................................................................................................TCGATTCACGTCAAGATGGAAGATGACAACATGACGGGAAAGCATGACCGACACCCTTGGCCCCGGCCGCAAGCGCCCCACGATCTATGACCTGGCCGAACGGGCG > NC_014034/2546172‑2546271
Base quality scores:
ATCG
< 3 ≤
ATCG
< 25 ≤
ATCG
< 31 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|