New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2605728194 (0.880)2 (0.010) 2/186 31.4 0.01 coding (69/780 nt) xthA1 exodeoxyribonuclease III
?NC_014034 = 3379717 313 (1.320)coding (79/174 nt) RCAP_rcc03181 hypothetical protein
Rejected: Position hash score below cutoff.

GCTGCTGTTGCTGTAAGCCGCCCCGCGAAGGAGAGACCATGAAGATCGCCACCTTCAACATCAACGGCATCAAGGCCCGCGCCGAGGCCCTGCCCGCCTGGCTGCGC....................................................................................................  >  NC_014034/2605622‑2605728
....................................................................................................GCTGCGCACGCCCAGCTTCGATGACCTGCAAATCGCGGAGATGAAGAAACAGAAACTGCGGCTCAAGGAAGAAATCGCCCGGCTGGAAGGCGTGGCGGTCTGAGTTC  <  NC_014034/3379717‑3379618
                                                                                                                                                                                                               
                                         AAGATCGCCACCTTCAACATCAACGGCATCAAGGCCCGCGCCGAGGCCCTGCCCGCCTGGCTGCGCACGCCCAGCTTCGATGACCTGCAAATCGCGGAGAT                                                                   >  1:1761025/1‑101 (MQ=255)
                                                                     TCAAGGCCCGCGCCGAGGCCCTGCCCGCCTGGCTGCGCACGCCCAGCTTCGATGACCTGCAAATCGCGGAGATGAAGAAACAGAAACTGCGGCTCAAGGAA                                       <  2:1760917/101‑1 (MQ=255)
                                                                                                                                                                                                               
GCTGCTGTTGCTGTAAGCCGCCCCGCGAAGGAGAGACCATGAAGATCGCCACCTTCAACATCAACGGCATCAAGGCCCGCGCCGAGGCCCTGCCCGCCTGGCTGCGC....................................................................................................  >  NC_014034/2605622‑2605728
....................................................................................................GCTGCGCACGCCCAGCTTCGATGACCTGCAAATCGCGGAGATGAAGAAACAGAAACTGCGGCTCAAGGAAGAAATCGCCCGGCTGGAAGGCGTGGCGGTCTGAGTTC  <  NC_014034/3379717‑3379618

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG