New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2710725251 (1.160)2 (0.010) 2/182 31.1 0.01 coding (744/849 nt) RCAP_rcc02522 pyrimidine ABC transporter permease
?NC_014034 2998768 = 201 (0.850)coding (242/1071 nt) RCAP_rcc02806 hypothetical protein
Rejected: Position hash score below cutoff.

ACTCATCTTCCCCGTTGCGACGGGTGCCAGAAGGTCGCCGCCTTCTCGATCATCGCGATCAGCCCGAAAAGGCCCGATCCCGCCAGCGCCGCCACCGCAATCTCGGCC....................................................................................................  >  NC_014034/2710618‑2710725
...................................................................................................ATCTCGGCCAAAATGAAGGGCGCGGGGCGGCCCTGATCCAGCCAGACCTGCGCCAGACAGAGGCCCAGCATCTCGCCGAACATCTGGCTGATCTCCGGCGCGGTGATGA  >  NC_014034/2998768‑2998867
                                                                                                                                                                                                                
                                                ATCATCGCGATCAGCCCGAAAAGGCCCGATCCCGCCAGCGCCGCCACCGCAATCTCGGCCAAAATGAAGGGCGCGGGGCGGCCCTGATCCAGCCAGACCTG                                                             >  1:4690428/1‑101 (MQ=255)
                                                 TCATCGCGATCAGCCCGAAAAGGCCCGATCCCGCCAGCGCCGCCACCGCAATCTCGGCCAAAATGAAGGGCGCGGGGCGGCCCTGATCCAGCCAGACCTGC                                                            <  2:4690172/101‑1 (MQ=255)
                                                                                                                                                                                                                
ACTCATCTTCCCCGTTGCGACGGGTGCCAGAAGGTCGCCGCCTTCTCGATCATCGCGATCAGCCCGAAAAGGCCCGATCCCGCCAGCGCCGCCACCGCAATCTCGGCC....................................................................................................  >  NC_014034/2710618‑2710725
...................................................................................................ATCTCGGCCAAAATGAAGGGCGCGGGGCGGCCCTGATCCAGCCAGACCTGCGCCAGACAGAGGCCCAGCATCTCGCCGAACATCTGGCTGATCTCCGGCGCGGTGATGA  >  NC_014034/2998768‑2998867

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG