New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	339620 =	171 (0.800)	2 (0.010)	2/180	30.9	0.01	coding (265/1176 nt)	tuf2	translation elongation factor Tu
	?	NC_014034	692963 =	196 (0.830)					coding (900/2673 nt)	RCAP_rcc00637	hypothetical protein
Rejected: Position hash score below cutoff.

TAGGGGATGCCCACCTGACGGCCGAGCAGGATGTGCTCGCGCGTTTGCGGCATCGGGCCGTCCGAGGCCGCCACAACCAGAATCGCGCCGTCCATCTGCGCCGCGCCGGT....................................................................................................  <  NC_014034/339729‑339620 ....................................................................................................CCGCGCCGGTCAGCACCTCGATCGTCTGCGCGCCCGTCGCCGGGCTCAGCACATCCGACAGCGTCTTGACGTCAAGGATCGAACTTTCGCGCGGCACCACCGCCTCCAGC  >  NC_014034/692963‑693062                                                                                                                                                                                                                                                         CGCGCGTTTGCGGCATCGGGCCGTCCGAGGCCGCCACAACCAGAATCGCGCCGTCCATCTGCGCCGCGCCGGTCAGCACCTCGATCGTCTGCGCGCCCGTC                                                                          >  2:1078433/1‑101 (MQ=35)                                                                       CCACAACCAGAATCGCGCCGTCCATCTGCGCCGCGCCGGTCAGCACCTCGATCGTCTGCGCGCCCGTCGCCGGGCTCAGCACATCCGACAGCGTCTTGACG                                         <  1:1078519/101‑1 (MQ=34)                                                                                                                                                                                                                    TAGGGGATGCCCACCTGACGGCCGAGCAGGATGTGCTCGCGCGTTTGCGGCATCGGGCCGTCCGAGGCCGCCACAACCAGAATCGCGCCGTCCATCTGCGCCGCGCCGGT....................................................................................................  <  NC_014034/339729‑339620 ....................................................................................................CCGCGCCGGTCAGCACCTCGATCGTCTGCGCGCCCGTCGCCGGGCTCAGCACATCCGACAGCGTCTTGACGTCAAGGATCGAACTTTCGCGCGGCACCACCGCCTCCAGC  >  NC_014034/692963‑693062 Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG