New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 483006 =195 (0.920)2 (0.010) 2/178 30.8 0.01 coding (742/1026 nt) RCAP_rcc00449 hypothetical protein
?NC_014034 590884 = 199 (0.840)coding (236/813 nt) murI glutamate racemase
Rejected: Position hash score below cutoff.

CCGACACGCCCGAGGTGGCGGCGGGGGCGATCCTCTCGGCGCAGCAGGCGCAGGCGGCGGAAAACCCGCTGCATGCGGCGCTGGCCTGGGCGGGCAGCGGCGCGGCGCTGA....................................................................................................  <  NC_014034/483116‑483006
....................................................................................................CGCGGCGCTGAAAAGGATGCAGGAACATTGGATCCCGAAGGACAAGCGGGTTCTGGGCGTCTTCGTGCCGCTGATCGAGGCGCTGACGGAACGGCAATGGGGCGACAACAG  >  NC_014034/590884‑590983
                                                                                                                                                                                                                   
                                CTCTCGGCGCAGCAGGCGCAGGCGGCGGAAAACCCGCTGCATGCGGCGCTGGCCTGGGCGGGCAGCGGCGCGGCGCTGAAAAGGATGCAGGAACATTGGAT                                                                                >  1:3008490/1‑101 (MQ=255)
                                               GCGCAGGCGGCGGAAAACCCGCTGCATGCGGCGCTGGCCTGGGCGGGCAGCGGCGCGGCGCTGAAAAGGATGCAGGAACATTGGATCCCGAAGGACAAGCG                                                                 <  2:3008302/101‑1 (MQ=255)
                                                                                                                                                                                                                   
CCGACACGCCCGAGGTGGCGGCGGGGGCGATCCTCTCGGCGCAGCAGGCGCAGGCGGCGGAAAACCCGCTGCATGCGGCGCTGGCCTGGGCGGGCAGCGGCGCGGCGCTGA....................................................................................................  <  NC_014034/483116‑483006
....................................................................................................CGCGGCGCTGAAAAGGATGCAGGAACATTGGATCCCGAAGGACAAGCGGGTTCTGGGCGTCTTCGTGCCGCTGATCGAGGCGCTGACGGAACGGCAATGGGGCGACAACAG  >  NC_014034/590884‑590983

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG