New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 546300 =226 (1.050)2 (0.010) 2/182 31.1 0.01 coding (835/1719 nt) RCAP_rcc00512 hypothetical protein
?NC_014034 = 953975 193 (0.810)coding (113/1488 nt) RCAP_rcc00862 divalent anion:Na+ symporter
Rejected: Position hash score below cutoff.

CTGGCGGCAGGCGAGACCCTGCCCTTCACCCGGATCGGCTCGGCCCGCGATGGCGTGGCCGAGGTGTTCCAGTCGGTCGCGCTGGCGCTGAGCGCGGATTCGCTGCCCG...................................................................................................  <  NC_014034/546408‑546300
....................................................................................................CGCTGCCCGCGCCCGCGGATCTCCCGCCCGAGGCCTGGCGCCTGGCCGGGCTGACGCTGTGGATGGTGATCTGGTGGCTGAGCGAGGTGGTGCCGCTGGCCGCCACCG  <  NC_014034/953975‑953877
                                                                                                                                                                                                                
                                                      GTGGCCGAGGTGTTCCAGTCGGTCGCGCTGGCGCTGAGCGCGGATTCGCTGCCCGCGCCCGCGGATCTCCCGCCCGAGGCCTGGCGCCTGGCCGGGCTGAC                                                       >  1:257127/1‑101 (MQ=255)
                                                                     CAGTCGGTCGCGCTGGCGCTGAGCGCGGATTCGCTGCCCGCGCCCGCGGATCTCCCGCCCGAGGCCTGGCGCCTGGCCGGGCTGACGCTGTGGATGGTGAT                                        <  2:257102/101‑1 (MQ=255)
                                                                                                                                                                                                                
CTGGCGGCAGGCGAGACCCTGCCCTTCACCCGGATCGGCTCGGCCCGCGATGGCGTGGCCGAGGTGTTCCAGTCGGTCGCGCTGGCGCTGAGCGCGGATTCGCTGCCCG...................................................................................................  <  NC_014034/546408‑546300
....................................................................................................CGCTGCCCGCGCCCGCGGATCTCCCGCCCGAGGCCTGGCGCCTGGCCGGGCTGACGCTGTGGATGGTGATCTGGTGGCTGAGCGAGGTGGTGCCGCTGGCCGCCACCG  <  NC_014034/953975‑953877

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG