New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 810185 =202 (0.890)2 (0.010) 2/192 31.9 0.01 coding (15/348 nt) RCAP_rcc00739 ArsR family transcriptional regulator
?NC_014034 2026435 = 202 (0.850)coding (1160/1623 nt) RCAP_rcc01873 peptidoglycan‑binding domain 1 protein
Rejected: Position hash score below cutoff.

GTCGGGCGGGGGGTTTTCGCATGCGCCGGGCCAAAGTCATATTCAACCGATCGGTTGACGTTTTGCCGCAGGATGCGCAAAGGTGGCGCATGGACCTTTCCGCC....................................................................................................  <  NC_014034/810288‑810185
....................................................................................................CGCCACCGCCCGGCCCCGGCTGTCGACCAGCTGGATATGCCCCGCCGCGCCCGGATTGCGCTGCATCATCGGCAGATATTCCTTGACCGTGATCGAGCGCGGCA  >  NC_014034/2026435‑2026534
                                                                                                                                                                                                            
                                       gatctAACCGATCGGTTGACGTTTTGCCGCAGGATGCGCAAAGGTGGCGCATGGACCTTTCCGCCACCGCCCGGCCCCGGCTGTCGACCAGCTGGATATGC                                                                  <  2:477487/96‑1 (MQ=255)
                                            AACCGATCGGTTGACGTTTTGCCGCAGGATGCGCAAAGGTGGCGCATGGACCTTTCCGCCACCGCCCGGCCCCGGCTGTCGACCAGCTGGATATGCagatc                                                             >  1:477538/1‑96 (MQ=255)
                                                                                                                                                                                                            
GTCGGGCGGGGGGTTTTCGCATGCGCCGGGCCAAAGTCATATTCAACCGATCGGTTGACGTTTTGCCGCAGGATGCGCAAAGGTGGCGCATGGACCTTTCCGCC....................................................................................................  <  NC_014034/810288‑810185
....................................................................................................CGCCACCGCCCGGCCCCGGCTGTCGACCAGCTGGATATGCCCCGCCGCGCCCGGATTGCGCTGCATCATCGGCAGATATTCCTTGACCGTGATCGAGCGCGGCA  >  NC_014034/2026435‑2026534

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG