New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 837778	191 (0.890)	2 (0.010)	2/182	31.1	0.01	coding (1267/1371 nt)	hupT	signal transduction histidine kinase HupT
	?	NC_014034	= 3452464	166 (0.700)					coding (757/1662 nt)	cydC	cysteine ABC transporter ATP‑binding protein/permease CydC
Rejected: Position hash score below cutoff.

GACACCGGCCCGGGCGTGGCCGAAGACGTGGCGCCGACGATTTTCGACCCGTTCTTCACCACCAAGGATGTCGGCAAGGGCACCGGGCTGGGCCTCTCGATCAGCGCCA....................................................................................................  >  NC_014034/837670‑837778 ....................................................................................................TCAGCGCCAGCGCCGAGGAGGATTGCCGCTCGATGTCATCGAGCCGGTTGCGCGCGGTTTCCTCGGCGGTGACCGCGTCCAGCGCCACCCCGGTCAGCCGGTCGAGCGC  <  NC_014034/3452464‑3452365                                                                                                                                                                                                                                                                                  tAGGATGTCGGCAAGGGCACCGGGCTGGGCCTCTCGATCAGCGCCAGCGCCGAGGAGGATTGCCGCTCGATGTCATCGAGCCGGTTGCGCGCGGTTTCCTC                                               <  1:3933192/100‑1 (MQ=255)                                                                 AGGATGTCGGCAAGGGCACCGGGCTGGGCCTCTCGATCAGCGCCAGCGCCGAGGAGGATTGCCGCTCGATGTCATCGAGCCGGTTGCGCGCGGTTTCCTCa                                              >  2:3932950/1‑100 (MQ=255)                                                                                                                                                                                                                   GACACCGGCCCGGGCGTGGCCGAAGACGTGGCGCCGACGATTTTCGACCCGTTCTTCACCACCAAGGATGTCGGCAAGGGCACCGGGCTGGGCCTCTCGATCAGCGCCA....................................................................................................  >  NC_014034/837670‑837778 ....................................................................................................TCAGCGCCAGCGCCGAGGAGGATTGCCGCTCGATGTCATCGAGCCGGTTGCGCGCGGTTTCCTCGGCGGTGACCGCGTCCAGCGCCACCCCGGTCAGCCGGTCGAGCGC  <  NC_014034/3452464‑3452365 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG