New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 839675 =199 (0.870)2 (0.010) 2/194 32.1 0.01 coding (802/1431 nt) hupV uptake hydrogenase large subunit
?NC_014034 = 2361880 203 (0.860)coding (1820/2496 nt) RCAP_rcc02188 diguanylate cyclase/phosphodiesterase
Rejected: Position hash score below cutoff.

CGCCGTCAAAGGGATGCGCCGTGCCGCCCAGCATCCAGGCATGGCTGAGATCCTCGGCAATCGCCGCCATGTCCGGCGCCGTGACCGCCCCCGCCTGCCAGAG....................................................................................................  <  NC_014034/839777‑839675
....................................................................................................GAGACCCGGCGCGTCTTCATCTCGACGATCGGCTGGAAGAAGAGCTGGAAATCGCGCGCGGCCCAGGCCCGGCGCAGATCGCTTTCCAGCGCCCGGCGCTGCT  <  NC_014034/2361880‑2361781
                                                                                                                                                                                                           
                                              GAGATCCTCGGCAATCGCCGCCATGTCCGGCGCCGTGACCGCCCCCGCCTGCCAGAGACCCGGCGCGTCTTCATCTCGACGATCGGCTGGAAGAAGAGCTG                                                          >  1:847450/1‑101 (MQ=255)
                                                    CTCGGCAACCGCCGCCATGTCCGGCGCCGTGACCGCCCCCGCCTGCCAGAGACCCGGCGCGTCTTCATCTCGACGATCGGCTGGAAGAAGAGCTGGAAATC                                                    <  2:847376/101‑1 (MQ=255)
                                                                                                                                                                                                           
CGCCGTCAAAGGGATGCGCCGTGCCGCCCAGCATCCAGGCATGGCTGAGATCCTCGGCAATCGCCGCCATGTCCGGCGCCGTGACCGCCCCCGCCTGCCAGAG....................................................................................................  <  NC_014034/839777‑839675
....................................................................................................GAGACCCGGCGCGTCTTCATCTCGACGATCGGCTGGAAGAAGAGCTGGAAATCGCGCGCGGCCCAGGCCCGGCGCAGATCGCTTTCCAGCGCCCGGCGCTGCT  <  NC_014034/2361880‑2361781

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG