New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 881993 =222 (1.040)2 (0.010) 2/180 30.9 0.01 coding (419/1140 nt) mrdB rod shape‑determining protein RodA
?NC_014034 2641856 = 198 (0.830)coding (2574/3222 nt) RCAP_rcc02463 hemolysin‑type calcium‑binding repeat family protein
Rejected: Position hash score below cutoff.

GGGGCGCAGCGCTGGCTGGATCTTGGACCCTTGCGGCTGCAACCCTCGGAAATCATGAAGATCGGTCTGGTGATGCTGCTGGCCGCCTATTACGACTGGCTGCCCGCCGA....................................................................................................  <  NC_014034/882102‑881993
....................................................................................................TGCCCGCCGAGAGGTTGACGATATCGGCATTCTGCCCGGTGGTCAGCGACACCGCCTCGATCCCGGTCAGGACCGTGCCCGCCCCGCTGACCGTGGCCGCGCCCGCCGCG  >  NC_014034/2641856‑2641955
                                                                                                                                                                                                                  
                                                   ATCATGAAGATCGGTCTGGTGATGCTGCTGGCCGCCTATTACGACTGGCTGCCCGCCGAGAGGTTGACGATATCGGCATTCTGCCCGGTGGTCAGCGACAC                                                            >  1:2990683/1‑101 (MQ=255)
                                                               GGTCTGGTGATGCTGCTGGCCGCCTATTACGACTGGCTGCCCGCCGAGAGGTTGACGATATCGGCATTCTGCCCGGTGGTCAGCGACACCGCCTCGATCCC                                                <  2:2990495/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GGGGCGCAGCGCTGGCTGGATCTTGGACCCTTGCGGCTGCAACCCTCGGAAATCATGAAGATCGGTCTGGTGATGCTGCTGGCCGCCTATTACGACTGGCTGCCCGCCGA....................................................................................................  <  NC_014034/882102‑881993
....................................................................................................TGCCCGCCGAGAGGTTGACGATATCGGCATTCTGCCCGGTGGTCAGCGACACCGCCTCGATCCCGGTCAGGACCGTGCCCGCCCCGCTGACCGTGGCCGCGCCCGCCGCG  >  NC_014034/2641856‑2641955

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG