New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 930881262 (1.190)2 (0.010) 2/186 31.4 0.01 intergenic (+104/‑70) pepN/gatB aminopeptidase N/glutamyl‑tRNA(Gln) amidotransferase subunit B
?NC_014034 = 2799690 216 (0.910)coding (1775/2643 nt) mcpA3 methyl‑accepting chemotaxis protein McpA
Rejected: Position hash score below cutoff.

TGAAAGCGCCGGGGCGCTGCCCCGGACCCCGGCGTATTTGCGCCAAGAAGAAGCTCCTCCGTTTCTTCTTGGCAAAAATACGCCCTTTCGACCTTACACCCGCCGCG.................................................................................................  >  NC_014034/930775‑930881
....................................................................................................CGCCGCGGCGGTTTCCTCGAGCGTCGCGGCCTGTTGCTCGGTCCGGCGCGAGAGATCCTCGGCCGCGCGCGAGATGCTGCCCGATTCGGTGCGGATCAGGCTCG  <  NC_014034/2799690‑2799594
                                                                                                                                                                                                            
                               gatctTTTGCGCCAAGAAGAAGCTCCTCCGTTTCTTCTTGGCAAAAATACGCCCTTTCGACCTTACACCCGCCGCGGCGGTTTCCTCGAGCGTCGCGGCCT                                                                          <  2:3636493/96‑1 (MQ=255)
                                    TTTGCGCCAAGAAGAAGCTCCTCCGTTTCTTCTTGGCAAAAATACGCCCTTTCGACCTTACACCCGCCGCGGCGGTTTCCTCGAGCGTCGCGGCCTagatc                                                                     >  1:3636722/1‑96 (MQ=255)
                                                                                                                                                                                                            
TGAAAGCGCCGGGGCGCTGCCCCGGACCCCGGCGTATTTGCGCCAAGAAGAAGCTCCTCCGTTTCTTCTTGGCAAAAATACGCCCTTTCGACCTTACACCCGCCGCG.................................................................................................  >  NC_014034/930775‑930881
....................................................................................................CGCCGCGGCGGTTTCCTCGAGCGTCGCGGCCTGTTGCTCGGTCCGGCGCGAGAGATCCTCGGCCGCGCGCGAGATGCTGCCCGATTCGGTGCGGATCAGGCTCG  <  NC_014034/2799690‑2799594

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG