BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396167 =	140 (0.920)	83 (0.550)	37/128	6.9	0.41	coding (49/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	98 (0.410)	83 (0.550)	37/128	6.9	0.41	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 224 total aligned reads displayed.


CGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1396067‑1396267


   aTCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTcc                                                                                                     >  1:537422/1‑100 (MQ=255)


   aTCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCg                                                                                                     >  1:4125989/1‑101 (MQ=255)


    tCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGc                                                                                                    <  1:1977664/101‑1 (MQ=255)


     cTGATTTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCt                                                                                                   <  1:1797331/101‑1 (MQ=255)


     cTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCCGCGTCGCt                                                                                                   >  1:2969149/1‑101 (MQ=255)


      tGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCCCGCTGCGTCGCTc                                                                                                  >  2:2402785/1‑101 (MQ=255)


       gATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCCCGCTGCGTCGCTcc                                                                                                 >  2:3043371/1‑101 (MQ=255)


       gATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCCCGCTGCGTCGCCcc                                                                                                 >  1:3136931/1‑101 (MQ=255)


       gATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcc                                                                                                 >  2:4590717/1‑101 (MQ=255)


       gATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGGCGCTcc                                                                                                 >  2:395632/1‑101 (MQ=255)


        aTGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACCCTGCGTCGCTccc                                                                                                >  1:2588816/1‑101 (MQ=255)


          gTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTccccc                                                                                              >  1:3165499/1‑101 (MQ=255)


           tataTGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTcccccc                                                                                             >  1:91800/1‑101 (MQ=255)


             tatGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCcgc                                                                                           <  2:2657451/101‑1 (MQ=255)


              atGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCcgcg                                                                                          >  2:2834327/1‑101 (MQ=255)


               tGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCgg                                                                                         <  2:1295602/101‑1 (MQ=255)


                  ccGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCggggg                                                                                      >  2:858225/1‑101 (MQ=255)


                     gTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGCC.ATCTGG.CAGGCTCCCGCCGCACCGCCGCGCCTCTCCCCCCCCgggggggg                                                                                   >  1:4708137/1‑98 (MQ=25)


                      tGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCggg                                                                                  >  1:3656463/1‑99 (MQ=255)


                       gtctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCTCGTATTG.CGCGCTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                                 <  1:1179849/92‑1 (MQ=2)


                       gagaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTgg                                                                                 >  2:4071199/1‑101 (MQ=255)


                       gagaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGGgg                                                                                 >  1:3360423/1‑101 (MQ=255)


                        aagcGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTTGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                                >  2:747629/4‑101 (MQ=255)


                         gaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                               <  1:279901/101‑1 (MQ=255)


                         gaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                               >  2:2966347/1‑101 (MQ=255)


                         gaCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                               <  2:1575601/101‑1 (MQ=255)


                           cGGCTGTCGATCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                             <  1:3490663/101‑1 (MQ=255)


                            ggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTGGCTCCCCCCGCGGGGGCGTggggcga                                                                            >  1:1709948/1‑96 (MQ=255)


                             gCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.aa                                                                          <  1:1540868/101‑1 (MQ=255)


                             gCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.aa                                                                          <  2:4125744/101‑1 (MQ=255)


                              cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.aaa                                                                         <  2:1366667/101‑1 (MQ=255)


                              cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGGGGATCG.aaa                                                                         >  1:653594/1‑101 (MQ=255)


                                gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAAcc                                                                       <  1:111875/101‑1 (MQ=255)


                                gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAAcc                                                                       <  1:1073624/101‑1 (MQ=255)


                                   gCTCCCCCCGCGGGGGCGTGGATCGAAACTGTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCgg                                                                    >  1:4222408/1‑101 (MQ=255)


                                     cccccccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCg                                                                  <  2:613959/100‑1 (MQ=255)


                                     cccccccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCg                                                                  <  2:865109/100‑1 (MQ=255)


                                       cccccGCAGGGTCGTGGATCGAACCTTTTCGTC.ATCTGG.CAGCCTGGCGCCAACCCGCTGCGTCCCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaa                                                                <  2:297817/101‑1 (MQ=25)


                                        ccccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaa                                                               <  2:2014150/101‑1 (MQ=255)


                                        ccccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaa                                                               >  1:294540/1‑101 (MQ=255)


                                         cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaaa                                                              >  2:1841850/1‑101 (MQ=255)


                                         cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaaa                                                              >  2:2606330/1‑101 (MQ=255)


                                         cccGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaaa                                                              <  2:1500718/101‑1 (MQ=255)


                                              gggggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGc                                                         >  2:2153645/1‑101 (MQ=255)


                                                gggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCa                                                       <  2:3804653/101‑1 (MQ=255)


                                                 ggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCAt                                                      <  1:272742/101‑1 (MQ=255)


                                                 ggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCAt                                                      >  2:3825698/1‑101 (MQ=255)


                                                 ggCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCAt                                                      <  1:3049701/101‑1 (MQ=255)


                                                  gCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATg                                                     <  2:3894336/101‑1 (MQ=255)


                                                  gCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATg                                                     <  1:1068722/101‑1 (MQ=255)


                                                   cGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGc                                                    >  1:802627/1‑101 (MQ=255)


                                                     tGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.Ct                                                 >  2:3682621/1‑101 (MQ=255)


                                                     tGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.Ct                                                 >  2:1622606/1‑101 (MQ=255)


                                                     tGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGACGCCAAGTTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGc.cc                                                 >  1:1640593/1‑100 (MQ=255)


                                                      ggATCGAAACTTTTCGTC.ATCTGG.CAGGCCCGCGCCCCCCCGCCTGGGCCCTCCCCCCCCGGGGGCGGGGGTCGAAAACCCGGGGAAAAACGGcacggccc                                                  >  2:3356747/1‑94 (MQ=255)


                                                        aTCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCg                                              <  1:4071441/101‑1 (MQ=255)


                                                        aTCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCg                                              <  1:4388737/101‑1 (MQ=255)


                                                         tCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCgg                                             >  2:289567/1‑101 (MQ=255)


                                                          cGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCggg                                            >  1:1948010/1‑101 (MQ=255)


                                                          cGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCggg                                            >  2:1958039/1‑101 (MQ=255)


                                                          cGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCggg                                            >  2:2259782/1‑101 (MQ=255)


                                                           gAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGgt                                           <  2:3204444/101‑1 (MQ=255)


                                                               cTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCt                                       <  1:495618/101‑1 (MQ=255)


                                                                 tttCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTgg                                     >  2:4046769/1‑101 (MQ=255)


                                                                 tttCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTgg                                     <  1:4506121/101‑1 (MQ=255)


                                                                  ttCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGc                                    >  1:4253012/1‑101 (MQ=255)


                                                                   tCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCt                                   >  1:443185/1‑101 (MQ=255)


                                                                    cGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                  >  1:4448034/1‑101 (MQ=255)


                                                                    cGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                  <  1:2666299/101‑1 (MQ=255)


                                                                     atctaTCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                  <  1:3388508/97‑1 (MQ=255)


                                                                      tC.ATCTGG.CAGGCTCGCGCCGCCCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTc                                <  1:4715882/101‑1 (MQ=255)


                                                                      tC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTc                                <  2:2209958/101‑1 (MQ=255)


                                                                      tC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTc                                <  1:3328938/101‑1 (MQ=255)


                                                                       c.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCg                               <  2:443141/101‑1 (MQ=255)


                                                                         aTCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTgagat                              >  2:3388302/1‑97 (MQ=255)


                                                                         aTCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGc                              >  2:3632692/1‑101 (MQ=255)


                                                                         aTCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAAACCGGCGAAAAACGGCCATGC.CTCCGGGGGTCTGGCTGTCGc                              >  1:1873551/1‑101 (MQ=255)


                                                                            tGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTcc                           >  2:3866857/1‑101 (MQ=255)


                                                                            tGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTcc                           >  2:1779089/1‑101 (MQ=255)


                                                                              g.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGGGTCTGGCTGTCGCTcccc                         >  1:2746709/1‑101 (MQ=255)


                                                                                cAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTccccc                        <  2:3360221/101‑1 (MQ=255)


                                                                                 aGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTcccccc                       <  1:2203485/101‑1 (MQ=255)


                                                                                  ggCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCcg                      <  2:3288951/101‑1 (MQ=255)


                                                                                    cTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCcgcg                    >  2:1056702/1‑101 (MQ=255)


                                                                                       gcgcCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCgggg                 <  1:1354275/101‑1 (MQ=255)


                                                                                           cgccACGCTGCGTCGCTCCCCCCGCGTGGGCGTGGATCG.AAACCCCGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGt             <  1:3988566/101‑1 (MQ=255)


                                                                                             ccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTgg           >  2:4483557/1‑101 (MQ=255)


                                                                                             ccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTgg           <  1:750425/101‑1 (MQ=255)


                                                                                             ccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTgg           >  2:1162159/1‑101 (MQ=255)


                                                                                              cACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGa          >  2:3543992/1‑101 (MQ=255)


                                                                                               aCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt         <  1:2019225/101‑1 (MQ=255)


                                                                                                cGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc        >  1:381424/1‑101 (MQ=255)


                                                                                                cGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc        <  2:4705925/101‑1 (MQ=255)


                                                                                                 gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  1:2403551/101‑1 (MQ=255)


                                                                                                 gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg       >  2:4293034/1‑101 (MQ=255)


                                                                                                 gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  2:246051/101‑1 (MQ=255)


                                                                                                 gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg       >  2:2046455/1‑101 (MQ=255)


                                                                                                 ccatcGTCGCCCCCCCCGCGGGGGCGTGGATCG.AAACTGGTCGAAGACCTGCTTGGCGCGCTGGATCTGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg       <  1:3300448/97‑1 (MQ=2)


                                                                                                     cGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc   >  2:2061326/1‑101 (MQ=255)


                                                                                                      gTCGCCCCCCCCGCGGGGGCGTGGATCG.AAGCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCCGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca  <  1:3422658/101‑1 (MQ=255)


CGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTC.ATCTGG.CAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1396067‑1396267

Base quality scores:


ATCG

< 3 ≤


ATCG

< 16 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG