New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396835 =160 (1.040)86 (0.560) 39/130 6.5 0.40 coding (717/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1397797 98 (0.410)intergenic (+101/+1797) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 287 total aligned reads displayed.

AACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1396735‑1396935
                                                                                                        |                                                                                                    
aaCCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATACCGCGCGGCCCGCGTgg                                                                                                      >  2:3285357/1‑101 (MQ=37)
   ccTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTc                                                                                                   <  1:3467380/101‑1 (MQ=255)
   ccTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTc                                                                                                   <  2:778249/101‑1 (MQ=255)
     tGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCATCGCGGACGGCTTGGGTCGc                                                                                                 >  1:422634/1‑101 (MQ=255)
      gTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCt                                                                                                <  2:2053102/101‑1 (MQ=255)
        cccTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTcc                                                                                              >  1:4607819/1‑101 (MQ=255)
          cTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTcccc                                                                                            >  2:857373/1‑101 (MQ=255)
           tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccccc                                                                                           <  2:2836670/101‑1 (MQ=255)
           tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTccccc                                                                                           >  2:3542903/1‑101 (MQ=255)
             atatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCcg                                                                                         <  2:4450054/101‑1 (MQ=255)
              tatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGGCGCTCCCCCcgc                                                                                        >  1:3512848/1‑101 (MQ=255)
                tgctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGCTCGCTCCCCCCGCgg                                                                                      <  1:4001584/101‑1 (MQ=255)
                 gctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggg                                                                                     >  2:126606/1‑101 (MQ=255)
                  ctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCgggg                                                                                    <  2:4144006/101‑1 (MQ=255)
                  ctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCgggg                                                                                    >  1:2246813/1‑101 (MQ=255)
                   tgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggggg                                                                                   >  1:2281353/1‑101 (MQ=255)
                   tgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCggggg                                                                                   >  1:1401983/1‑101 (MQ=255)
                    gcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGc                                                                                  >  1:135136/1‑101 (MQ=255)
                    gcCACGATGCCCTTGAGTCGCTCCCCCCGC.GGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCg                                                                                 <  1:1453855/101‑1 (MQ=255)
                     ccACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCg                                                                                 >  1:2496674/1‑101 (MQ=255)
                       tcGATGCCATTGGGTGGCTCCCCCCGCGGGGGGGTGGATCGAACCCGTGTGGA.T...GATCATGCACCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGtt                                                                               <  2:3180443/100‑2 (MQ=37)
                        cGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  2:4699480/101‑1 (MQ=255)
                        cGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  2:2143936/101‑1 (MQ=255)
                        cGATGCCCTTGAGCCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGCTGGTTCGCCCGCGGGGGCGTgg                                                                              >  2:2582045/1‑101 (MQ=37)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             >  1:773102/1‑101 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             <  2:662907/101‑1 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCC..CGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  2:2098062/1‑101 (MQ=255)
                          tcacatcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  1:1099666/91‑1 (MQ=2)
                          aTGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            <  2:1345742/101‑1 (MQ=255)
                           tccatcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             <  2:1373718/92‑1 (MQ=0)
                           tGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           <  2:3931065/101‑1 (MQ=255)
                            gCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCCCGGGGGCGTGGGTCg                                                                          >  1:3244869/1‑101 (MQ=255)
                            acatcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            >  2:1104407/9‑101 (MQ=2)
                             cccTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                         <  2:2739074/101‑1 (MQ=255)
                             catcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  1:937005/8‑101 (MQ=2)
                             catcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           <  2:2039674/94‑1 (MQ=2)
                              ccTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  1:587978/101‑1 (MQ=255)
                                ttGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      >  2:2215505/1‑101 (MQ=255)
                                ttGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      >  2:117941/1‑101 (MQ=255)
                                ttGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGGCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      >  2:1611749/1‑101 (MQ=255)
                                ttGAGTCGCTCACCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGTCTTGGGTCGCTCCCCCCGCGGGGGCGTGGCTCGAAAc                                                                      >  2:2345156/1‑101 (MQ=255)
                                 tGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                     <  2:4345764/101‑1 (MQ=255)
                                   cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca                                                                     >  1:3824057/2‑100 (MQ=2)
                                   aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgg                                                                   >  1:2056767/1‑101 (MQ=255)
                                    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcac                                                                    >  1:3392700/1‑99 (MQ=2)
                                     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatg                                                                   >  2:4159995/1‑98 (MQ=2)
                                      cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCCGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGATACCGGTcc                                                                <  2:1780785/101‑1 (MQ=255)
                                      cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTcc                                                                <  2:2010521/101‑1 (MQ=255)
                                       gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCa                                                               <  2:1411537/101‑1 (MQ=255)
                                       gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCa                                                               >  1:2878921/1‑101 (MQ=255)
                                        gacccgccGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggct                                                                >  2:380749/3‑95 (MQ=0)
                                        cTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCTGGGGCGTGGATCGAAACCGGTCCag                                                              <  2:324305/101‑1 (MQ=255)
                                        cTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCag                                                              <  1:2035533/101‑1 (MQ=255)
                                        cTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCag                                                              <  1:4212133/101‑1 (MQ=255)
                                         tCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggcta                                                               >  1:200319/1‑94 (MQ=2)
                                         tCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggcta                                                               >  1:535857/1‑94 (MQ=2)
                                         tCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCaga                                                             >  1:3061794/1‑101 (MQ=255)
                                         tCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCaga                                                             <  1:4672457/101‑1 (MQ=255)
                                          ccccccGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggctat                                                              <  2:3359591/101‑9 (MQ=2)
                                          ccccccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCagag                                                            >  1:4521439/1‑101 (MQ=255)
                                          ccccccGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCagag                                                            <  1:3737106/101‑1 (MQ=255)
                                           cccccGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggctatg                                                             <  2:1892419/101‑10 (MQ=2)
                                           cccccGCGGGGGCGTGGATCGAAACGGCGTAGA.TCTCGGTCTGGGTGCGCTCGCGG.TTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggctatg                                                             >  1:2144460/1‑92 (MQ=2)
                                             cccGCGGGGGCGTGGATCGAAACCG.GTCCAGA...GAT.AGACCGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAg                                                        <  2:2067156/101‑1 (MQ=11)
                                                 cgGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                                                     <  1:3191509/101‑1 (MQ=255)
                                                 cgGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                                                     <  2:4626070/101‑1 (MQ=255)
                                                 cgGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                                                     >  1:2762696/1‑101 (MQ=255)
                                                   ggggCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcgc                                                   <  1:983436/101‑1 (MQ=255)
                                                    gggCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcgcg                                                  <  2:4246026/101‑1 (MQ=255)
                                                         tGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAc                                             <  1:3605618/101‑1 (MQ=255)
                                                         tGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAc                                             <  2:3438225/101‑1 (MQ=255)
                                                          ggATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcc                                            <  1:1722519/101‑1 (MQ=255)
                                                           gATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcct                                           <  2:91836/101‑1 (MQ=255)
                                                              cGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcctcct                                        >  2:2392850/1‑101 (MQ=255)
                                                              cGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcctcct                                        >  1:2411336/1‑101 (MQ=255)
                                                               gAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACctcctc                                       <  1:186224/101‑1 (MQ=255)
                                                                 aaCCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAg                                     <  2:2440332/101‑1 (MQ=255)
                                                                  aCCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGa                                    <  1:1910064/101‑1 (MQ=255)
                                                                   ccGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGAc                                   <  2:2281220/101‑1 (MQ=255)
                                                                    cGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACg                                  <  1:1242868/101‑1 (MQ=255)
                                                                    cGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACg                                  >  2:3339606/1‑101 (MQ=255)
                                                                          ga.t...gatCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTc                            >  1:2638842/1‑101 (MQ=255)
                                                                             t...gatCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGTCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccc                          >  1:4344355/1‑101 (MQ=255)
                                                                                 gatCATGCAGCGCGGACGGCTTGGGTCACTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCCGACGTCGCTcccc                         >  2:2945177/1‑101 (MQ=255)
                                                                                  atCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccccc                        <  1:2098183/101‑1 (MQ=255)
                                                                                  atCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccccc                        >  1:699711/1‑101 (MQ=255)
                                                                                    cATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCcg                      <  1:3453168/101‑1 (MQ=255)
                                                                                       gCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgg                   <  1:3522986/101‑1 (MQ=255)
                                                                                             cgGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGt             <  1:3906109/101‑1 (MQ=255)
                                                                                                 cGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGCGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt         >  2:2600014/1‑101 (MQ=255)
                                                                                                 cGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt         <  2:560803/101‑1 (MQ=255)
                                                                                                 cGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt         <  1:2798978/101‑1 (MQ=255)
                                                                                                 cGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt         <  2:3997890/101‑1 (MQ=255)
                                                                                                 cGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt         <  1:453540/101‑1 (MQ=255)
                                                                                                  ggCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATc        <  1:2072557/101‑1 (MQ=255)
                                                                                                  ggCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATc        >  1:1665586/1‑101 (MQ=255)
                                                                                                     ttGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGaa     >  1:649241/1‑101 (MQ=255)
                                                                                                     ttGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGaa     <  1:1039394/101‑1 (MQ=255)
                                                                                                       gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc   <  2:4491704/101‑1 (MQ=255)
                                                                                                       gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc   <  1:1635122/101‑1 (MQ=255)
                                                                                                        |                                                                                                    
AACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA.T...GATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1396735‑1396935

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG