BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396198	135 (0.880)	47 (0.300)	10/130	18.9	0.23	coding (80/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	1397836 =	181 (0.760)	47 (0.300)	10/130	18.9	0.23	intergenic (+140/+1758)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 215 total aligned reads displayed.


TGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCT  >  NC_014034/1396098‑1396297


tGTTGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGGGGATCG.AAAc                                                                                                      >  1:3129290/1‑101 (MQ=255)


tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGGCTTCCTCCCCCCGCGGGGGGGTGGGTCG.AAAc                                                                                                      >  2:2275799/1‑101 (MQ=37)


 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAAcc                                                                                                     >  2:4125533/1‑101 (MQ=255)


   cGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACCCTGCGTCGCCCCCCCCCCGGGGGCGGGGGTCG.AAACCCg                                                                                                   >  1:1068978/1‑101 (MQ=38)


    gCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCgg                                                                                                  >  1:3168384/1‑101 (MQ=255)


    gCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCgg                                                                                                  <  2:2968961/101‑1 (MQ=255)


    gCTCCCCCCGCGGGGGCGTGGATCGAAACTGTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCgg                                                                                                  >  1:4222408/1‑101 (MQ=255)


      tCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCg                                                                                                <  1:40321/101‑1 (MQ=255)


      cccccccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCg                                                                                                <  2:613959/100‑1 (MQ=255)


      cccccccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCg                                                                                                <  2:865109/100‑1 (MQ=255)


       ccccccGCGGGGGCGTGGATCGAAGCTTTTCGTCCTCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGa                                                                                               <  1:2197389/101‑1 (MQ=255)


       ccccccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGa                                                                                               <  2:2735335/101‑1 (MQ=255)


       ccccccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGa                                                                                               >  2:2126557/1‑101 (MQ=255)


         ccccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaa                                                                                             >  1:294540/1‑101 (MQ=255)


          cccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaaa                                                                                            >  2:2606330/1‑101 (MQ=255)


          cccGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaaa                                                                                            <  2:1500718/101‑1 (MQ=255)


           ccGCGGGGGCGTGGATCGAAAGTTTTCGTCATCTGGCAGTCTCGCGCCGCCACGCTTCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGaaaaa                                                                                           <  1:3918406/101‑1 (MQ=255)


            cgcgGGGGCGTGGATCGAAACTTTTCGTCTTCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAAc                                                                                          <  1:344609/101‑1 (MQ=255)


             gcgGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACg                                                                                         >  2:2181651/1‑101 (MQ=255)


               gggggCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGc                                                                                       >  2:2880998/1‑101 (MQ=255)


                 gggCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCa                                                                                     <  2:3804653/101‑1 (MQ=255)


                  ggCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCAt                                                                                    <  1:3049701/101‑1 (MQ=255)


                  ggCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAAAGGCCAt                                                                                    >  2:4369288/1‑101 (MQ=255)


                    cGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGc                                                                                  >  1:802627/1‑101 (MQ=255)


                      tGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.Ct                                                                               >  2:1622606/1‑101 (MQ=255)


                      tGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.Ct                                                                               >  2:3682621/1‑101 (MQ=255)


                      tGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGACGCCAAGTTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGc.cc                                                                               >  1:1640593/1‑100 (MQ=255)


                       ggATCGAAACTTTTCGTCATCTGGCAGGCCCGCGCCCCCCCGCCTGGGCCCTCCCCCCCCGGGGGCGGGGGTCGAAAACCCGGGGAAAAACGGcacggccc                                                                                >  2:3356747/1‑94 (MQ=255)


                        gATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTcc                                                                             <  1:661565/101‑1 (MQ=255)


                         aTCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCg                                                                            <  2:2437921/101‑1 (MQ=255)


                         aTCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCg                                                                            <  1:4388737/101‑1 (MQ=255)


                           cGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCggg                                                                          >  2:1958039/1‑101 (MQ=255)


                            gAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGgt                                                                         <  2:3204444/101‑1 (MQ=255)


                            gAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCCCTCCCCCCCCGGGGGCGTGGATCG.AAAACCCGCGGAAAACGGGCCTGC.CTCCGGgt                                                                         >  2:3422451/1‑101 (MQ=37)


                               aCTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTc                                                                      <  2:2060619/101‑1 (MQ=255)


                                  tttCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTgg                                                                   >  2:4046769/1‑101 (MQ=255)


                                   ttCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGc                                                                  >  1:4253012/1‑101 (MQ=255)


                                    tCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCt                                                                 >  1:443185/1‑101 (MQ=255)


                                     cGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                                                <  2:4470711/101‑1 (MQ=255)


                                     cGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                                                <  1:2666299/101‑1 (MQ=255)


                                     cGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                                                >  1:4448034/1‑101 (MQ=255)


                                     atctaTCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTg                                                                <  1:3388508/97‑1 (MQ=255)


                                       tCATCTGGCAGGCTCGCGCCGCCCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTc                                                              <  1:4715882/101‑1 (MQ=255)


                                       tCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTc                                                              >  2:476572/1‑101 (MQ=255)


                                         aTCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGc                                                            >  2:3632692/1‑101 (MQ=255)


                                         aTCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAAACCGGCGAAAAACGGCCATGC.CTCCGGGGGTCTGGCTGTCGc                                                            >  1:1873551/1‑101 (MQ=255)


                                           cTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGcaggtgcag                                                          <  2:1607770/101‑9 (MQ=255)


                                            tGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTTTGGCTGtgcgtcc                                                         >  2:3819811/1‑95 (MQ=255)


                                            tGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTcc                                                         <  1:4125778/101‑1 (MQ=255)


                                            tGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTcc                                                         >  2:3866857/1‑101 (MQ=255)


                                            tGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTcc                                                         >  2:1779089/1‑101 (MQ=255)


                                              gCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGGGTCTGGCTGTCGCTcccc                                                       >  1:2746709/1‑101 (MQ=255)


                                               cAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTccccc                                                      <  1:1311222/101‑1 (MQ=255)


                                               cAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTccccc                                                      <  2:3360221/101‑1 (MQ=255)


                                                aGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CACCGGGTGTCTGGCTGTAGATaccccc                                                     >  2:4697823/1‑101 (MQ=37)


                                                 ggCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCcg                                                    <  2:3288951/101‑1 (MQ=255)


                                                     cgcgCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCggg                                                <  1:2966535/101‑1 (MQ=255)


                                                          cgccACGCTGCGTCGCTCCCCCCGCGTGGGCGTGGATCG.AAACCCCGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGt                                           <  1:3988566/101‑1 (MQ=255)


                                                           gccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTg                                          >  2:2229989/1‑101 (MQ=255)


                                                           gccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTg                                          <  1:4649866/101‑1 (MQ=255)


                                                            ccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTgg                                         <  1:750425/101‑1 (MQ=255)


                                                            ccACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTgg                                         >  2:807248/1‑101 (MQ=255)


                                                            ccACGCTGCGTCGCGCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTgg                                         <  2:1068899/101‑1 (MQ=255)


                                                             cACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGa                                        <  2:1824189/101‑1 (MQ=255)


                                                              ccGCTGCGCCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt                                       <  2:39832/100‑1 (MQ=255)


                                                              aCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt                                       >  2:2022241/1‑101 (MQ=255)


                                                              aCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGAt                                       <  1:2019225/101‑1 (MQ=255)


                                                               cGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc                                      >  1:381424/1‑101 (MQ=255)


                                                                gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg                                     <  1:107438/101‑1 (MQ=255)


                                                                gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg                                     >  2:4293034/1‑101 (MQ=255)


                                                                gCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg                                     <  1:2403551/101‑1 (MQ=255)


                                                                ccatcGTCGCCCCCCCCGCGGGGGCGTGGATCG.AAACTGGTCGAAGACCTGCTTGGCGCGCTGGATCTGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                     <  1:3300448/97‑1 (MQ=2)


                                                                     gTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca                                <  1:1952661/101‑1 (MQ=255)


                                                                        gCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcagca                             >  2:177558/1‑101 (MQ=255)


                                                                           ccccccGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGt                          <  2:2478578/101‑1 (MQ=255)


                                                                            cccccGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTc                         <  2:4595054/101‑1 (MQ=255)


                                                                                cgcgGGGGCGTGGATCG.AACCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGcc                     <  2:1881610/101‑1 (MQ=255)


                                                                                cgcgGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGcc                     >  1:3617019/1‑101 (MQ=255)


                                                                                cgcgGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGcc                     <  1:4483807/101‑1 (MQ=255)


                                                                                 gcgGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCcg                    <  2:3367052/101‑1 (MQ=255)


                                                                                    ggggCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCgg                 <  1:1841962/101‑1 (MQ=255)


                                                                                        cGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCTGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGcccc             >  1:142667/1‑101 (MQ=255)


                                                                                        cGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGcccc             >  1:3743029/1‑101 (MQ=255)


                                                                                        cGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGcccc             <  2:3165299/101‑1 (MQ=255)


                                                                                         gTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCg            >  1:2234096/1‑101 (MQ=255)


                                                                                          tGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCgg           >  1:46100/1‑101 (MQ=255)


                                                                                          tGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCgg           <  1:3356949/101‑1 (MQ=255)


                                                                                           ggATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGt          >  1:291281/1‑101 (MQ=255)


                                                                                            gATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTg         >  1:2384255/1‑101 (MQ=255)


                                                                                            gATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTg         >  1:1144345/1‑101 (MQ=255)


                                                                                             aTCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGa        <  2:653530/101‑1 (MQ=255)


                                                                                               cG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAAc      <  1:3682850/101‑1 (MQ=255)


                                                                                                g.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACt     >  1:156329/1‑101 (MQ=255)


                                                                                                  aaaCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACtt    >  2:3573572/1‑101 (MQ=255)


                                                                                                  aaaCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACtt    >  1:1886113/1‑101 (MQ=255)


                                                                                                    aCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt  <  2:291247/101‑1 (MQ=255)


                                                                                                    aCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt  >  2:1215865/1‑101 (MQ=255)


                                                                                                    aCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt  <  1:988991/101‑1 (MQ=255)


                                                                                                    aCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt  <  1:2606482/101‑1 (MQ=255)


                                                                                                    aCCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt  <  1:1056781/101‑1 (MQ=255)


TGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCG.AAACCCGGCGAAAAACGGCCATGC.CTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCT  >  NC_014034/1396098‑1396297

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG