BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1640006 =	42 (0.200)	44 (0.210)	11/178	23.1	0.33	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	= 1748562	138 (0.580)	44 (0.210)	11/178	23.1	0.33	intergenic (‑266/‑132)	RCAP_rcc01616/gppA	hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase
Rejected: Position hash score below cutoff.

Only 100 of 119 total aligned reads displayed.


ATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....G....G....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCC  >  NC_014034/1639906‑1640106


aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....g                                                                                                                <  2:2822602/101‑1 (MQ=255)


aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....g                                                                                                                <  1:2663759/101‑1 (MQ=255)


aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....g                                                                                                                <  1:1999735/101‑1 (MQ=255)


 tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....gg                                                                                                               <  1:1201147/101‑2 (MQ=255)


  cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTGGGGGAAGATGAAAACCATCCCTTTCATCTTTCCCCCAATATTCCCGGGGGC.CC..ggg....g....ggg                                                                                                              >  1:2059209/1‑99 (MQ=37)


  cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggc                                                                                                              <  1:2923644/101‑3 (MQ=255)


   ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAGATGAAACCCATCCCTTTTATCTTTCCCCCAAAATCCCCGGGGGG.CC..ggg....g....gggg                                                                                                             >  1:2625853/1‑98 (MQ=25)


   ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAACCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggca                                                                                                             <  1:751088/101‑4 (MQ=255)


   ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggca                                                                                                             <  1:2486902/101‑4 (MQ=255)


    tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggcag                                                                                                            <  1:4533577/101‑5 (MQ=255)


     ccGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGCAAGATGAAAACCATCCCTTTCATCTTTCCCCAAAAATTCCGGGGGGG.CC..ggg....g....gggggg                                                                                                           >  2:2050754/1‑96 (MQ=25)


     ccGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAAAAGAAACCCATCCCCTTCATCTTTCCCCCAAAATCCCCGGGGGC.CC..cgg....g....gggggc                                                                                                           >  1:1222181/1‑96 (MQ=255)


     ccGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggcagc                                                                                                           <  2:3084301/101‑6 (MQ=255)


      cGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGGAGATGAAAACCATCCCTTTCATCTTTCCCCAAATAACCCGGGGGGC.CC..ggg....g....gggggcg                                                                                                          >  2:3607415/1‑95 (MQ=25)


      cGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggcagcg                                                                                                          <  1:65982/101‑7 (MQ=255)


      cGGATGTGACTTTCGATGCCTCCGGCGGGGAGATTTGGGGGAAAAAGAAAACCATCCCTTTCATTTTTCCCCCAAAATCCCCCGGGGG.CC..ggg....g....ggggggg                                                                                                          >  1:1241367/1‑95 (MQ=255)


      cGGATGTGACTTTCGATGCCTCCGGCGGGGACATTTTGGGGCAGATTCTACCCATCCCCCTCAACTTCCCCCAAATATCCCCGGGGGC.GC..tgg....g....ggcactg                                                                                                          >  2:3713257/1‑95 (MQ=255)


       ggATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGGAAGATGAAACCCATCCCTTTCATCTTTCCCCAAATATCCCCGGGGGC.CC..ggg....g....ggcggcgc                                                                                                         >  1:1365722/1‑94 (MQ=37)


       ggATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAAAAGGAAAACACCCCTTTCTTCTTGCCCCCAATATCCCGGGGGGG.CC..GGG....G....g....g...g...cggcc                                                                                               >  2:2598487/1‑97 (MQ=255)


        gATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGGAAGATGAAAACCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..ggg....g....ggcggcgcc                                                                                                        >  1:576630/1‑93 (MQ=25)


        gATGTGACTTTCGATGCCTCCGGCGGGGAGATTTTGGGCAAGGAGAAACCCCTCCCCTTCCTCTTTCCCCAAATATCCCCGGGGCC.CC..cgg....g....ggcatcgcc                                                                                                        >  1:3848731/1‑93 (MQ=255)


         aTGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGCAAGATGAAAACCCTCCCTTTCATCTTGCCCCACAAATCCCCGGGGGC.CC..ggg....g....ggcggcgccc                                                                                                       >  1:733080/1‑92 (MQ=25)


                   cGAGGCCGCCGGGGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CG..GGG....GGGCAG....C...G...CCCCCCGCCACtt                                                                                       <  2:2136944/101‑1 (MQ=18)


                         ccggggggggtATATTGGGGGAAAGAGAAACCCCACCCTTTTCATCTCCCCACAAATA.CCGGGGGGGC.CC..GGG....G....GGCC.C...GCC.CCCCCCGCCACTTCCGCCa                                                                                 <  2:4749304/94‑1 (MQ=255)


                                 gggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAg                                                                         >  1:3729482/1‑101 (MQ=25)


                                  ggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                        >  1:2805380/1‑101 (MQ=25)


                                    atatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                      >  2:4711333/1‑101 (MQ=21)


                                    atatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                      >  2:316465/1‑101 (MQ=25)


                                    atatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                      >  2:410652/1‑101 (MQ=25)


                                    atatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTCCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                      >  1:1615709/1‑101 (MQ=21)


                                      atTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGGGGGAG....G....C...G...CCCCCCGACACTTCCGCCACGGAGCAGCAccc                                                                    >  1:2298324/1‑101 (MQ=21)


                                       tttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                   >  2:2529038/1‑101 (MQ=25)


                                       tttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                   >  1:4421398/1‑101 (MQ=21)


                                        ttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                  >  2:943005/1‑101 (MQ=25)


                                        ttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                  >  1:687942/1‑101 (MQ=25)


                                         tGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                 >  2:3750556/1‑101 (MQ=25)


                                          ggggCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                >  1:3833556/1‑101 (MQ=25)


                                          ggggCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                >  2:1939009/1‑101 (MQ=25)


                                           gggCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                                               >  1:1132578/1‑101 (MQ=25)


                                              cAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                            >  2:3020307/1‑101 (MQ=25)


                                              cAAGATGAAACCCATCCCTTTCATCTTCCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACCGGCCCGCGCCCCGGCCgct                                                            >  1:2875967/1‑99 (MQ=18)


                                               aaGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                           >  1:4139012/1‑101 (MQ=25)


                                               aaGATGAAACCCATCCCTTTAATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                           >  1:4513828/1‑101 (MQ=21)


                                                aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                          >  2:4477221/1‑101 (MQ=25)


                                                aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                          >  1:544546/1‑101 (MQ=21)


                                                  aTGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                        >  2:3404402/1‑101 (MQ=25)


                                                    gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                      >  2:2055668/1‑101 (MQ=25)


                                                    gAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                      >  1:443048/1‑101 (MQ=25)


                                                      aaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                    >  1:2547690/1‑101 (MQ=25)


                                                      aaCACATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                    >  1:3654816/1‑101 (MQ=21)


                                                        cccATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                                  >  2:986686/1‑101 (MQ=25)


                                                         ccATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                                 >  2:3864777/1‑101 (MQ=25)


                                                         ccACCCCTTCCATCTGCCCCAAAATCTCCGGGGGGGC.CG..GGG....G....GCCACC...C...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                                 <  2:1581428/101‑1 (MQ=255)


                                                           aTCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                               >  2:1288773/1‑101 (MQ=25)


                                                            tCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                              >  1:4732557/1‑101 (MQ=25)


                                                              ccTTTCATCTTGCCCCAAATATCCCGGGGGGCGCG..GGG....G....G....CAGGG...CCCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTTGGCGAAGGGGACcgcg                                            >  2:1487261/1‑101 (MQ=21)


                                                                tttCATCTTGCCCCAAATATCCCGGGGGGC.TT..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                          >  1:4226708/1‑101 (MQ=25)


                                                                 ttcctcctcccccAAATCCCCGGGGGGGC.CCGGGGG....G....G....C...GCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                          <  2:2625701/92‑1 (MQ=255)


                                                                 ttCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                         >  2:3356416/1‑101 (MQ=25)


                                                                  tCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                        >  2:4307558/1‑101 (MQ=25)


                                                                   cATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                       >  1:361970/1‑101 (MQ=25)


                                                                   cATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                       >  1:1547649/1‑101 (MQ=25)


                                                                   cATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                       >  2:1659158/1‑101 (MQ=25)


                                                                     tCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                     >  1:1324923/1‑101 (MQ=25)


                                                                     tCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                     >  1:397874/1‑101 (MQ=25)


                                                                      cTTGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                    >  1:4457848/1‑101 (MQ=25)


                                                                      cTTGACCCAAATATCCCGGGGGGC.CCG.GGG....G....G....CAGGG...CCCCCCCCCACTTCCCCCCCGGGGCAACGCCCCGGCCGCTGACGAAGGGGACCCCGAGGTTTCa                                    >  2:4016567/1‑101 (MQ=12)


                                                                        tGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                  >  2:3239822/1‑101 (MQ=25)


                                                                        tGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                  >  1:3110905/1‑101 (MQ=25)


                                                                        tGCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                  >  2:1138210/1‑101 (MQ=25)


                                                                         tccccAAATTCCCCGGGGGGC.CC..GGG....G....GGC..C...GCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                  <  1:816921/100‑1 (MQ=255)


                                                                         gCCCCAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa                                 >  1:3766772/1‑101 (MQ=25)


                                                                             cAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                             >  2:1977851/1‑101 (MQ=25)


                                                                             cAAATATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                             >  1:3555941/1‑101 (MQ=25)


                                                                              aaaTATCCCGGGGGGC.CC..GGG....G....GGCAAC...G...CCCCCCGCCACTTCAGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGCCGGCGATGTTTCAAAAGAtac                            >  1:540166/1‑99 (MQ=21)


                                                                               aaTATCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                           >  1:1443592/1‑101 (MQ=25)


                                                                                atatCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                          >  1:4398989/1‑101 (MQ=37)


                                                                                atatCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                          >  2:3878987/1‑101 (MQ=37)


                                                                                atatCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                          >  1:878589/1‑101 (MQ=37)


                                                                                 tatCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa                         >  2:4577645/1‑101 (MQ=25)


                                                                                 tatCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa                         >  1:2268471/1‑101 (MQ=37)


                                                                                  atCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCCCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                        >  1:101088/1‑101 (MQ=25)


                                                                                  atCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                        >  2:1362994/1‑101 (MQ=37)


                                                                                   tCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCCCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGCTGTTTCAAAAGATCCTGATc                       >  1:941516/1‑101 (MQ=25)


                                                                                   tCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                       >  2:3410666/1‑101 (MQ=37)


                                                                                   tCCCGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                       >  2:2359065/1‑101 (MQ=37)


                                                                                      cGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                    >  1:658632/1‑101 (MQ=37)


                                                                                      cGGGGGGC.CC..GGG....GGGCAG....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                    >  1:1466382/1‑101 (MQ=37)


                                                                                                     ccggggggcag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc            >  1:489254/11‑101 (MQ=255)


                                                                                                      cggggggcag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc           >  2:309524/10‑101 (MQ=255)


                                                                                                      cggggggcag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc           >  1:3232890/10‑101 (MQ=255)


                                                                                                       ggggggcag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg          >  2:448750/9‑101 (MQ=255)


                                                                                                          gggcag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga       >  2:4752735/6‑101 (MQ=255)


                                                                                                            gcag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc     >  1:2034705/4‑101 (MQ=255)


                                                                                                             cag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg    >  2:4471834/3‑101 (MQ=255)


                                                                                                             cag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg    >  2:1649770/3‑101 (MQ=255)


                                                                                                             cag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg    >  2:4510681/3‑101 (MQ=255)


                                                                                                             cag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg    >  1:1931155/3‑101 (MQ=255)


                                                                                                              ag....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc   >  2:164689/2‑101 (MQ=255)


                                                                                                               g....c...g...cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGcc  >  1:176177/1‑101 (MQ=255)


ATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGC.CC..GGG....G....G....C...G...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCC  >  NC_014034/1639906‑1640106

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG