BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1303934 =	110 (0.490)	84 (0.370)	21/190	18.7	0.39	intergenic (+121/+36)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
*	?	NC_014034	2640144 =	150 (0.630)	84 (0.370)	21/190	18.7	0.39	intergenic (‑120/+156)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 135 total aligned reads displayed.


TTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....C....GCCAAGATGGGG..G..GC.CCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAGCGCG  >  NC_014034/1303856‑1304033


tttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcg                                                                                      >  1:1182023/1‑101 (MQ=14)


tttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcg                                                                                      >  2:374135/1‑101 (MQ=14)


tttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcg                                                                                      >  1:3223675/1‑101 (MQ=14)


tttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcg                                                                                      >  1:2230184/1‑101 (MQ=14)


 ttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcgg                                                                                     >  2:4455011/1‑101 (MQ=14)


 ttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcgg                                                                                     <  2:4251159/101‑1 (MQ=14)


 ttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcgg                                                                                     >  1:2070276/1‑101 (MQ=14)


 ttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcgg                                                                                     <  1:2603452/101‑1 (MQ=14)


  tGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcggg                                                                                    >  1:2748680/1‑101 (MQ=14)


   ggggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGgggcgggc                                                                                   <  2:1030063/101‑1 (MQ=14)


    gggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggcc                                                                                  <  2:35052/101‑1 (MQ=14)


    gggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggcc                                                                                  <  2:100771/101‑1 (MQ=14)


     ggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccg                                                                                 >  1:416691/1‑101 (MQ=14)


      gCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgc                                                                                >  2:891930/1‑101 (MQ=14)


       cAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgca                                                                               >  1:1005706/1‑101 (MQ=14)


       cAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgca                                                                               >  1:2218997/1‑101 (MQ=14)


        aaaaaaacccccCTCCTTCCCCCTCGCCGCAAATCTCCGGGGGGGTGAATTGGCGGAAG....GCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcag                                                                              <  1:837361/93‑1 (MQ=0)


           aTAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggc                                                                           >  2:2497221/1‑101 (MQ=14)


           aTAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggc                                                                           >  1:2809015/1‑101 (MQ=14)


            tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggcc                                                                          >  2:4567739/1‑101 (MQ=14)


            tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggcc                                                                          >  1:628534/1‑101 (MQ=14)


            tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggcc                                                                          >  1:547864/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccg                                                                         >  2:2821025/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccg                                                                         >  2:1934589/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccg                                                                         >  1:500951/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccg                                                                         >  1:2213045/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccc                                                                         >  2:1849592/1‑100 (MQ=9)


               aCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccgcc                                                                       >  1:3667317/1‑100 (MQ=9)


               aCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCgggccgcagggccgca                                                                       >  1:1519862/1‑101 (MQ=14)


               aCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCACCCTTT.TCGGGGCgggccgcagggccgca                                                                       >  2:2670726/1‑101 (MQ=9)


                ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCAc                                                                      >  2:1730247/1‑101 (MQ=14)


                 cccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCAcc                                                                     <  1:3386410/101‑1 (MQ=14)


                  ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCAccc                                                                    <  2:57189/101‑1 (MQ=14)


                  ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCAccc                                                                    >  1:3600595/1‑101 (MQ=14)


                   cATCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCt                                                                   <  1:3207876/101‑1 (MQ=9)


                   cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGGCGCAccag                                                                   >  2:2076957/1‑99 (MQ=9)


                   cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCt                                                                   <  2:103971/101‑1 (MQ=14)


                    ctcctcccACCTTGCAGCAAATATCCAGGGGGGTCATTGGGC....CGAATGCCAAGAGGGGG..GCAGCGCCCCGTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTg                                                                  <  2:2925033/94‑1 (MQ=9)


                    aTCCTTTCACCTTGCCGCAAATGTCCCGGGGTGTGAATTGGC....CGAAGGCCAAGAGGGGGCCA..GCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTg                                                                  <  2:1861172/101‑1 (MQ=12)


                    aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTg                                                                  >  2:3389615/1‑101 (MQ=14)


                    aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTg                                                                  >  1:2487335/1‑101 (MQ=14)


                      ccTTTCGCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTc                                                                <  2:3355812/101‑1 (MQ=9)


                      ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTc                                                                >  1:4747107/1‑101 (MQ=14)


                      ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTc                                                                >  2:358691/1‑101 (MQ=14)


                       cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                               >  1:2834161/1‑101 (MQ=14)


                       cTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                               >  2:4424460/1‑101 (MQ=9)


                        tttCACCTTGCCGCAAATGTCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              <  2:2661907/101‑1 (MQ=9)


                        tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              >  2:4066451/1‑101 (MQ=14)


                         ttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgc                                                             <  2:3922984/101‑1 (MQ=14)


                          tCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg                                                            >  1:76319/1‑101 (MQ=14)


                          tCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg                                                            >  1:4562207/1‑101 (MQ=14)


                           cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc                                                           >  1:1564847/1‑101 (MQ=17)


                            aCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCa                                                          >  2:2454476/1‑101 (MQ=17)


                             ccTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                         <  1:1937531/101‑1 (MQ=17)


                             ccTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                         >  2:4155170/1‑101 (MQ=17)


                             ccTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                         <  1:2643219/101‑1 (MQ=17)


                              cTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATc                                                        <  1:1559989/101‑1 (MQ=17)


                               ttGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGTGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcc                                                       <  2:1168239/101‑1 (MQ=9)


                               ttGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcc                                                       <  2:3944275/101‑1 (MQ=17)


                                tGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GTAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGGCGAACCCTGTCAGCGCATcgc                                                      >  1:754867/1‑99 (MQ=9)


                                tGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATccc                                                      >  1:3480147/1‑101 (MQ=17)


                                 gCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcccc                                                     <  1:3825795/101‑1 (MQ=17)


                                  ccGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa                                                    >  1:4271064/1‑101 (MQ=17)


                                  ccGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa                                                    <  2:225766/101‑1 (MQ=17)


                                   cGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                   <  2:221356/101‑1 (MQ=17)


                                   cGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                   >  1:1745044/1‑101 (MQ=17)


                                   cGCAAAGATCGCGGGGGGTGAATTGGCGGGAG....GCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                   <  1:1409729/101‑1 (MQ=12)


                                     cAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                 >  2:1758003/1‑101 (MQ=17)


                                     cAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                 >  2:1323032/1‑101 (MQ=17)


                                      aaaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                >  1:3716237/1‑101 (MQ=17)


                                      aaaTATCCCGGGGGGGGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCCCACCCTGTCAGCGCATCCCCAAgcc                                                >  2:689352/1‑101 (MQ=12)


                                      aaaTACCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                <  2:608137/101‑1 (MQ=12)


                                       aaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc                                               >  2:4678497/1‑101 (MQ=17)


                                       aaTATCCCGGGGGGCGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc                                               >  2:2868272/1‑101 (MQ=12)


                                        atatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg                                              >  1:1275530/1‑101 (MQ=17)


                                        atatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GAAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg                                              >  2:4150090/1‑101 (MQ=18)


                                         tatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgc                                             >  1:2800716/1‑101 (MQ=18)


                                          atCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                            >  2:3540093/1‑101 (MQ=18)


                                          atCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                            >  2:3718881/1‑101 (MQ=18)


                                          atCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                            >  1:3405276/1‑101 (MQ=18)


                                             ccGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCccgcccgc                                         >  2:1887108/1‑101 (MQ=18)


                                              cGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                        >  2:4049882/1‑101 (MQ=18)


                                              cGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                        >  2:136087/1‑101 (MQ=18)


                                              cGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCACTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                        >  2:2423206/1‑101 (MQ=16)


                                               ggggggTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCAt                                       >  1:4133336/1‑101 (MQ=18)


                                               ggggggTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCAt                                       <  1:46507/101‑1 (MQ=18)


                                               ggggggTGAATTGGC....CGAAGGCCAAGAGGGGG..GCAGCGCCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAACCCCGCCCGCAt                                       >  2:1978697/1‑101 (MQ=12)


                                                                                 gggggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCa           >  2:4645208/11‑101 (MQ=255)


                                                                                 gggggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCa           <  1:2461307/91‑1 (MQ=255)


                                                                                  ggggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCaa          >  2:871832/10‑100 (MQ=255)


                                                                                  ggggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCAt          <  2:2253580/92‑1 (MQ=255)


                                                                                   gggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCGCCTAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         >  2:3925318/9‑101 (MQ=255)


                                                                                   gggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         <  2:4698359/93‑1 (MQ=255)


                                                                                    ggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCCTaa        >  1:168613/8‑101 (MQ=255)


                                                                                    ggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa        >  1:1008608/8‑101 (MQ=255)


                                                                                    ggcagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa        <  1:2647949/94‑1 (MQ=255)


                                                                                     ccccc.cccccTTTGTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaaa       <  2:251185/97‑1 (MQ=255)


                                                                                      cagcgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCCCCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAg      <  2:4040005/96‑1 (MQ=255)


                                                                                         cgcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgc   >  2:3315404/3‑101 (MQ=255)


                                                                                          gcccccTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgcc  >  1:4739030/2‑100 (MQ=255)


TTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....C....GCCAAGATGGGG..G..GC.CCCCCTTT.TCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAGCGCG  >  NC_014034/1303856‑1304033

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG