BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408498 =	23 (0.130)	89 (0.510)	23/148	13.9	0.43	intergenic (+116/+32)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 2941053	216 (0.910)	89 (0.510)	23/148	13.9	0.43	intergenic (‑716/+27)	RCAP_rcc02750/RCAP_rcc02751	hypothetical protein/N‑acetylmuramoyl‑L‑alanine amidase, family 2
Rejected: Position hash score below cutoff.

Only 100 of 178 total aligned reads displayed.


TGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCAG  >  NC_014034/408397‑408598


tGCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg.....g                                                                                                           <  2:4279399/101‑1 (MQ=255)


gccccccAGCCCCCGGGAATTTTTGCGAAAAAAAGAACCCGATTTCCTTCATCTTCCCGAAAATACCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg.....g                                                                                                           <  1:60363/99‑1 (MQ=255)


 gCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                                                          <  2:1040154/101‑1 (MQ=255)


 gCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                                                          <  2:4667896/101‑1 (MQ=255)


 gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                                                          >  2:310404/1‑101 (MQ=255)


 gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                                                          <  1:4526466/101‑1 (MQ=255)


  cccccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gca                                                                                                         <  1:1163294/101‑2 (MQ=255)


   ccccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcag                                                                                                        >  2:4176845/1‑99 (MQ=255)


      cAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagc                                                                                                     >  2:412609/1‑96 (MQ=255)


         aCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccc                                                                                                  >  2:616733/1‑93 (MQ=25)


         aCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccc                                                                                                  >  2:3405396/1‑93 (MQ=25)


           cccgGGGATATGTGCGGCAGAATAAATCCGTTGTCCTTCAGCTTGCGGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccccc                                                                                                <  2:2089677/101‑11 (MQ=16)


           ccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccccc                                                                                                <  2:2910302/101‑11 (MQ=25)


                       tGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGcc                                                                                    >  1:107750/1‑101 (MQ=21)


                        gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCa                                                                                   >  2:1002229/1‑101 (MQ=21)


                         gggCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCaa                                                                                  <  2:629448/100‑1 (MQ=21)


                         cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCaa                                                                                  <  2:4351998/101‑1 (MQ=21)


                         cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCaa                                                                                  <  1:4570327/101‑1 (MQ=21)


                           gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCaaaa                                                                                >  1:44476/1‑101 (MQ=21)


                           gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCaaaa                                                                                >  1:642247/1‑101 (MQ=21)


                            cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAg                                                                               >  2:3693208/1‑101 (MQ=21)


                             acgctGAAGCCGAGGTCCTACCCTTCGCCGCACATCTCCCGGGGTGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAgg                                                                              <  2:83278/97‑1 (MQ=255)


                             aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCCCAGGTCGCCAAAAgg                                                                              >  2:406303/1‑101 (MQ=18)


                                aTGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGgacc                                                                           <  2:768647/101‑1 (MQ=21)


                                 tGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGgaccg                                                                          >  2:2895009/1‑101 (MQ=21)


                                   aaGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGgaccgac                                                                        >  1:314619/1‑101 (MQ=21)


                                    aGCCGCTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGgaccgacc                                                                       <  1:4664193/101‑1 (MQ=18)


                                     gcggATGTCCTTCATCTTGCGGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCt                                                                      <  1:1142724/98‑1 (MQ=18)


                                      ccGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTc                                                                     <  2:1964719/101‑1 (MQ=21)


                                       cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCa                                                                    >  2:3610045/1‑101 (MQ=21)


                                       cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCa                                                                    <  1:4645935/101‑1 (MQ=21)


                                        gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                                                   >  1:367171/1‑101 (MQ=21)


                                        gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                                                   <  2:4237759/101‑1 (MQ=21)


                                        gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                                                   >  2:1834243/1‑101 (MQ=21)


                                         aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                                                  >  2:3513408/1‑101 (MQ=21)


                                         aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....GCAGAGCACCCCGCAAAGGTCGCCAAAAGGACCGACCTCAGa                                                                  >  2:2235749/1‑101 (MQ=21)


                                          tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                                                 >  1:2788854/1‑101 (MQ=21)


                                          tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                                                 >  1:8071/1‑101 (MQ=21)


                                          tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                                                 <  2:1496973/101‑1 (MQ=21)


                                          tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                                                 >  1:4248100/1‑101 (MQ=21)


                                          tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                                                 <  2:4564739/101‑1 (MQ=21)


                                            tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                                               <  1:1191833/101‑1 (MQ=21)


                                             ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg                                                              >  1:3504248/1‑101 (MQ=21)


                                               ttCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc                                                            >  1:4293556/1‑101 (MQ=21)


                                               ttCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc                                                            <  1:161612/101‑1 (MQ=21)


                                                tCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                                                           <  2:3616724/101‑1 (MQ=21)


                                                 cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                                                          >  1:1401202/1‑101 (MQ=21)


                                                 cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                                                          >  1:4626354/1‑101 (MQ=21)


                                                  aTCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg                                                         <  2:1277280/101‑1 (MQ=21)


                                                   tCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGc                                                        >  2:1079770/1‑101 (MQ=21)


                                                      tGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgggcag                                                     <  2:1368575/101‑5 (MQ=21)


                                                       gCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                                                    <  2:697522/101‑1 (MQ=25)


                                                        ccGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGACCGGCGTGtt                                                   >  1:4722568/1‑101 (MQ=25)


                                                         cGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTg                                                  >  1:555926/1‑101 (MQ=25)


                                                         cGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTg                                                  <  1:1866876/101‑1 (MQ=25)


                                                          gCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc                                                 <  2:216872/101‑1 (MQ=25)


                                                            aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               <  2:1440288/101‑1 (MQ=255)


                                                            aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  1:2805043/1‑101 (MQ=37)


                                                            aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  2:2591439/1‑101 (MQ=37)


                                                            aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  1:739941/1‑101 (MQ=37)


                                                            aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  1:640850/1‑101 (MQ=37)


                                                            aaaTATCCCGGGGGGAGGCTTGCCGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  2:2074868/1‑101 (MQ=25)


                                                              atacCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg                                             <  2:35444/101‑1 (MQ=255)


                                                               tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgc                                            >  1:1001358/1‑101 (MQ=255)


                                                               tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCGCAGATCAGCCCGGCGGGTTGCATcgc                                            >  2:1392174/1‑101 (MQ=255)


                                                                atCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg                                           >  1:3839148/1‑101 (MQ=255)


                                                                atCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg                                           >  1:2135247/1‑101 (MQ=255)


                                                                atCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg                                           >  2:1693287/1‑101 (MQ=255)


                                                                 tCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg                                          >  1:2638313/1‑101 (MQ=255)


                                                                    cGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGt                                       <  1:1341830/101‑1 (MQ=255)


                                                                     ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      <  1:1705074/101‑1 (MQ=255)


                                                                     ggggggAGGCTTGCCGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      <  1:415309/101‑1 (MQ=255)


                                                                      gggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa                                     <  1:2033517/101‑1 (MQ=255)


                                                                       ggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa                                    >  2:299222/1‑101 (MQ=255)


                                                                       ggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa                                    <  1:4721052/101‑1 (MQ=255)


                                                                            ggCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGcgcg                               <  2:2764744/101‑1 (MQ=255)


                                                                            ggCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGcgcg                               >  1:3771830/1‑101 (MQ=255)


                                                                             gCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCgg                              >  2:2803031/1‑101 (MQ=255)


                                                                             gCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCgg                              <  2:2611589/101‑1 (MQ=255)


                                                                             gCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCgg                              >  2:2470348/1‑101 (MQ=255)


                                                                             gCTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCACgg                              >  1:3331365/1‑101 (MQ=255)


                                                                              cTTGCTGAAAGC.AAGACGGGGGGCAGAGC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGc                             >  1:4692666/1‑101 (MQ=255)


                                                                                                ggggggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCa            <  1:412653/91‑1 (MQ=255)


                                                                                                ggggggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCa            >  2:3452223/11‑101 (MQ=255)


                                                                                                ggggggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCa            >  1:1963291/11‑101 (MQ=255)


                                                                                                 gggggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAg           >  2:3300892/10‑101 (MQ=255)


                                                                                                   ggggagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGtt         >  2:4021015/8‑101 (MQ=255)


                                                                                                   gggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGtt         >  1:1230780/8‑101 (MQ=255)


                                                                                                   gggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGtt         <  1:573548/94‑1 (MQ=255)


                                                                                                   ccgccccgC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGtt         <  1:1606771/94‑1 (MQ=255)


                                                                                                    ggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTc        <  2:3798203/95‑1 (MQ=255)


                                                                                                    ggcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTc        <  1:1326096/95‑1 (MQ=255)


                                                                                                     gcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCg       >  2:2302937/6‑101 (MQ=255)


                                                                                                     gcagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCg       <  1:3536732/96‑1 (MQ=255)


                                                                                                      cagagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCgg      >  2:1108885/5‑101 (MQ=255)


                                                                                                       agagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGt     >  1:3524490/4‑101 (MQ=255)


                                                                                                        gagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTc    >  1:3971063/3‑101 (MQ=255)


                                                                                                        gagC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTc    <  2:2055052/99‑1 (MQ=255)


                                                                                                         agC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCa   <  2:3826444/100‑1 (MQ=255)


                                                                                                          gC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCAg  <  1:2526707/101‑1 (MQ=255)


TGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCAG  >  NC_014034/408397‑408598

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG