New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_014034 | = 2600949 | 1 (0.000) | 96 (0.430) | 12/188 | 23.3 | 0.42 | intergenic (+11/‑130) | RCAP_rcc02424/surE | short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE |
? | NC_014034 | = 2941070 | 262 (1.100) | intergenic (‑733/+10) | RCAP_rcc02750/RCAP_rcc02751 | hypothetical protein/N‑acetylmuramoyl‑L‑alanine amidase, family 2 | |||||
Rejected: Position hash score below cutoff. |
CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCCCCTGCCCCGCCGGATCCG > NC_014034/2600851‑2600971
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cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggct < 2:4224046/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggct < 2:3399050/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggcggggg > 1:840018/1‑101 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctc > 1:1719400/1‑98 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctc > 1:3229933/1‑98 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctc > 2:4200149/1‑98 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctct < 1:2432959/101‑5 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctct < 2:1242609/101‑5 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctct < 2:2741726/101‑5 (MQ=255)
gCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTTCCGAGATCTGACGGACgggtggctctg < 1:3458648/101‑6 (MQ=255)
gCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctg < 1:798602/101‑6 (MQ=255)
gCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctg < 2:3100547/101‑6 (MQ=255)
gCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCCCTGATCGATTGCCGCGGCGAAGCGAAACCCCCTTCTTCCCGAAATC.GACGGAGCGGGGGGTccg > 2:3248407/1‑100 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc > 2:681915/1‑94 (MQ=255)
gcgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctgcccc < 2:4683478/101‑10 (MQ=255)
cgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctgccccc > 2:1357110/1‑91 (MQ=255)
cgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctgccccc > 2:423812/1‑91 (MQ=255)
cgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACggggggctctgccccc > 1:1299029/1‑91 (MQ=255)
cGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACGGGGGGGCCCGCCCCCccgcctctcgcc > 2:4539560/1‑94 (MQ=255)
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CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAA.CGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCCCCTGCCCCGCCGGATCCG > NC_014034/2600851‑2600971
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|