BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1395665	179 (1.160)	60 (0.390)	10/130	18.9	0.26	intergenic (+477/‑454)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	1396706 =	167 (0.700)	60 (0.390)	10/130	18.9	0.26	coding (588/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 245 total aligned reads displayed.


ATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTG  >  NC_014034/1396606‑1396806


aTTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcg                                                                                                      <  1:4500916/101‑1 (MQ=255)


  ttCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcgtc                                                                                                    >  1:4574469/1‑101 (MQ=255)


   tcgtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcgtcg                                                                                                   <  2:1777682/101‑1 (MQ=255)


     gtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCt                                                                                                 >  2:4322881/1‑101 (MQ=255)


     gtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCt                                                                                                 <  1:2901275/101‑1 (MQ=255)


     gtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCt                                                                                                 <  2:303800/101‑1 (MQ=255)


       cgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcc                                                                                               >  1:4450304/1‑101 (MQ=255)


        gCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTccc                                                                                              >  1:2821193/1‑101 (MQ=255)


        gCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTccc                                                                                              >  2:2838303/1‑101 (MQ=255)


           tACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccccc                                                                                           <  2:629636/101‑1 (MQ=255)


                 gCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCgggg                                                                                     <  1:3443892/101‑1 (MQ=255)


                   cTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc                                                                                   >  1:3335048/1‑101 (MQ=255)


                   cTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc                                                                                   <  1:225627/101‑1 (MQ=255)


                    tgtCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAATCCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCg                                                                                  <  2:2165795/99‑1 (MQ=255)


                     aTCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCgg                                                                                 >  1:3127199/1‑100 (MQ=255)


                     aTCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGt                                                                                 <  1:1190346/101‑1 (MQ=255)


                     aTCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGt                                                                                 >  1:4519942/1‑101 (MQ=255)


                     aTCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGt                                                                                 >  1:324339/1‑101 (MQ=255)


                      tCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  1:1664457/101‑1 (MQ=255)


                       cTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTgg                                                                               <  2:2638326/101‑1 (MQ=255)


                        tGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                              >  1:2535705/1‑101 (MQ=255)


                         gATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                             >  2:4014183/1‑101 (MQ=255)


                          aTTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  1:3913100/101‑1 (MQ=255)


                          aTTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  1:3401666/101‑1 (MQ=255)


                          aTTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:4185691/101‑1 (MQ=255)


                          aTTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            >  2:2737160/1‑101 (MQ=255)


                          aTTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:2520948/101‑1 (MQ=255)


                           tttCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                           <  2:4519689/101‑1 (MQ=255)


                            ttCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                          <  2:4377222/101‑1 (MQ=255)


                             tCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         <  2:1235694/101‑1 (MQ=255)


                              cGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        >  1:963819/1‑101 (MQ=255)


                                  tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCt                                                                    >  2:1039315/1‑101 (MQ=255)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCGCGGCGTCCCGAAGACGGTCTTCTGTTGCCGCTGCGTCGCTCCCCCGGCGGGGGCGTGGATCTAAAca                                                                      >  2:4465099/1‑100 (MQ=2)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCGCGGCGTCCCGAAGACGGTCTTCTGGTGCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                      >  2:1605914/1‑101 (MQ=2)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTg                                                                   <  1:4167155/101‑1 (MQ=255)


                                     cTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTc                                                                 >  1:2010638/1‑101 (MQ=255)


                                      tCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                                >  1:2440467/1‑101 (MQ=255)


                                      tCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                                >  2:3903455/1‑101 (MQ=255)


                                      cccccccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                                <  1:1021360/100‑1 (MQ=255)


                                         ccccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTc                                                             <  1:676796/101‑1 (MQ=255)


                                         ccccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTc                                                             <  2:24097/101‑1 (MQ=255)


                                          cccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCa                                                            <  1:826984/101‑1 (MQ=255)


                                            cgcgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCata                                                          >  2:757529/1‑101 (MQ=255)


                                             gcgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCatat                                                         <  1:1365022/101‑1 (MQ=255)


                                             gcgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCatat                                                         >  1:1780894/1‑101 (MQ=255)


                                             gcgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCatat                                                         >  1:1338562/1‑101 (MQ=255)


                                              cgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtg                                                        >  2:1403325/1‑101 (MQ=255)


                                               gggggCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgc                                                       >  1:3561310/1‑101 (MQ=255)


                                               gggggCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgc                                                       >  1:4662742/1‑101 (MQ=255)


                                               gggggCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgc                                                       >  1:4679499/1‑101 (MQ=255)


                                                ggggCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgct                                                      >  1:4626323/1‑101 (MQ=255)


                                                   gCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAGCCCTGTCCCTCATATGCTGcc                                                   <  1:1595136/101‑1 (MQ=255)


                                                   gCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGcc                                                   <  2:365316/101‑1 (MQ=255)


                                                   gCGTGGATCGAAACCATGCGGCG...ATAACTCGCTAATGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGcc                                                   <  1:4077031/101‑1 (MQ=255)


                                                    cGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCa                                                  >  1:2669334/1‑101 (MQ=255)


                                                     gTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCAc                                                 >  2:961406/1‑101 (MQ=255)


                                                      tGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCAca                                                >  2:3452956/1‑100 (MQ=255)


                                                      tGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACg                                                <  1:3765029/101‑1 (MQ=255)


                                                       ggATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGa                                               >  2:1631609/1‑101 (MQ=255)


                                                       ggATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGa                                               >  1:898188/1‑101 (MQ=255)


                                                        gATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGAt                                              <  1:2245935/101‑1 (MQ=255)


                                                         aTCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATg                                             <  2:3334846/101‑1 (MQ=255)


                                                         aTCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATg                                             >  2:4211886/1‑101 (MQ=255)


                                                            gAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGccc                                          >  2:1876902/1‑101 (MQ=255)


                                                             aaaCCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCt                                         >  2:4147116/1‑101 (MQ=255)


                                                             aaaCCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCt                                         >  1:4314829/1‑101 (MQ=255)


                                                              aaCCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCtt                                        >  1:2152496/1‑101 (MQ=255)


                                                                 cATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAg                                     <  1:1414709/101‑1 (MQ=255)


                                                                 cATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTCCCACGATGCCCTTGAg                                     <  1:4147362/101‑1 (MQ=255)


                                                                  aTGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGt                                    >  2:4099714/1‑101 (MQ=255)


                                                                  aTGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGt                                    <  2:3712113/101‑1 (MQ=255)


                                                                    gcggcg...ATAACTCGCTCTTGCGCTCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTTAGTCg                                  <  2:817383/101‑1 (MQ=255)


                                                                        cg...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcc                              <  2:130307/101‑1 (MQ=255)


                                                                        cg...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcc                              >  2:397391/1‑101 (MQ=255)


                                                                         g...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccc                             >  2:2345633/1‑101 (MQ=255)


                                                                         g...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccc                             <  2:1409880/101‑1 (MQ=255)


                                                                             aTAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcccc                            >  1:4346011/1‑101 (MQ=255)


                                                                              tAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccccc                           <  1:2942859/101‑1 (MQ=255)


                                                                               aaCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcccccc                          >  2:2035412/1‑101 (MQ=255)


                                                                               aaCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcccccc                          <  1:2337726/101‑1 (MQ=255)


                                                                                aCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCcg                         >  2:3961450/1‑101 (MQ=255)


                                                                                    gCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCggg                     >  1:3643990/1‑101 (MQ=255)


                                                                                      tctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCggggg                   >  1:778323/1‑101 (MQ=255)


                                                                                       ctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGc                  >  1:2739238/1‑101 (MQ=255)


                                                                                       ctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGc                  >  2:3191309/1‑101 (MQ=255)


                                                                                       ctTGCGATCCGTCATCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGc                  <  2:3412199/101‑1 (MQ=255)


                                                                                        ttGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCg                 <  1:1838597/101‑1 (MQ=255)


                                                                                        ttGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCg                 <  2:2441625/101‑1 (MQ=255)


                                                                                        ttGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCg                 <  1:608148/101‑1 (MQ=255)


                                                                                            gATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGa             >  1:1157521/1‑101 (MQ=255)


                                                                                            ccgatctCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGa             <  1:2803200/95‑1 (MQ=255)


                                                                                             ctCCGTCATCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGAt            <  1:1734682/100‑1 (MQ=255)


                                                                                             aTCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGAt            <  2:498085/101‑1 (MQ=255)


                                                                                                 gTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa        <  2:3578865/101‑1 (MQ=255)


                                                                                                   cATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGaagatcgg      >  2:2803035/1‑94 (MQ=255)


                                                                                                   cATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc      >  1:2079335/1‑101 (MQ=255)


                                                                                                   cATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGCGGATCGAAAc      >  2:2132553/1‑101 (MQ=255)


                                                                                                    aTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc     >  2:2072436/1‑101 (MQ=255)


                                                                                                      cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCGCCCGCGGGGGCGTGGATCGAAACCgg   >  1:3985116/1‑100 (MQ=255)


                                                                                                       gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgtg  >  2:1745719/1‑101 (MQ=255)


ATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTG  >  NC_014034/1396606‑1396806

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG