New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 788033143 (0.660)37 (0.170) 7/184 26.5 0.28 intergenic (+105/+31) pntB/RCAP_rcc00717 pyridine nucleotide transhydrogenase subunit beta/hypothetical protein
?NC_014034 = 2330282 48 (0.200)intergenic (+257/+55) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

CGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGGG....G.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGT  >  NC_014034/2330182‑2330372
                                                                                                     |                                                                                                      
cGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc                                                                                                        <  1:1092329/101‑1 (MQ=255)
cGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc                                                                                                        <  1:1283516/101‑1 (MQ=255)
 gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg                                                                                                       >  1:3484708/1‑101 (MQ=255)
 gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg                                                                                                       <  1:4456641/101‑1 (MQ=255)
  cACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgg                                                                                                      <  2:4082501/101‑1 (MQ=255)
  cACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgg                                                                                                      >  1:2164257/1‑101 (MQ=255)
  cACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgg                                                                                                      >  1:1784800/1‑101 (MQ=255)
    cccccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGGTTTCACCTGGGGCCAAAGAtcccgggg                                                                                                    >  1:590227/1‑101 (MQ=255)
     ccccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggg                                                                                                   >  2:683389/1‑101 (MQ=255)
     ccccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCGTTCACCTGGGGGCAAAGAtcccggggg                                                                                                   >  2:109375/1‑101 (MQ=255)
       ccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtc                                                                                                 <  2:3560168/101‑1 (MQ=255)
       ccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtc                                                                                                 <  1:4559852/101‑1 (MQ=255)
        cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                <  2:1408986/101‑1 (MQ=255)
        cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                >  1:1818441/1‑101 (MQ=255)
        cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                                <  2:3346820/101‑1 (MQ=255)
         ggCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccg                                                                                               >  2:3674041/1‑100 (MQ=255)
          gCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgg                                                                                              >  1:1341704/1‑99 (MQ=255)
           cGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggg                                                                                             >  1:3863422/1‑101 (MQ=255)
            gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCCCCGGCGGCCCCGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                            >  1:1626452/1‑101 (MQ=255)
            gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                            >  1:4430674/1‑101 (MQ=255)
             tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGGCCCGG.ATCACAGGCGGCCCGGGCGGATTTCACCTGGGGCCAAAGAtcccgggggtccggggg                                                                                           >  1:3013816/1‑101 (MQ=255)
             tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCCGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg                                                                                           >  1:3782713/1‑101 (MQ=255)
              aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                          <  1:4637802/101‑2 (MQ=255)
              aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                          >  1:4748542/1‑100 (MQ=255)
              aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                          <  1:2449561/101‑2 (MQ=255)
              aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                          >  1:1126542/1‑100 (MQ=255)
                ttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcgg                                                                                        <  2:1345793/101‑4 (MQ=255)
                ttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcgg                                                                                        <  1:1685990/101‑4 (MQ=255)
                   cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagc                                                                                     >  2:1677319/1‑95 (MQ=255)
                   cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagc                                                                                     <  2:2826191/101‑7 (MQ=255)
                   cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggggcggagc                                                                                     >  2:3525327/1‑95 (MQ=255)
                     ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccc                                                                                   >  1:472191/1‑93 (MQ=255)
                     ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccc                                                                                   >  2:4700359/1‑93 (MQ=255)
                      cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagcccc                                                                                  <  2:3926916/101‑10 (MQ=38)
                      cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagcccc                                                                                  >  2:3186183/1‑92 (MQ=38)
                       aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccccc                                                                                 <  2:964445/101‑11 (MQ=38)
                                  ggggCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGcc                                                                >  2:4538002/1‑101 (MQ=25)
                                  ggggCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGcc                                                                >  2:3432579/1‑101 (MQ=25)
                                        cgcgggCGGGCCCCCGG.ATCCCGGGCGGCCCGGGC.GCCTTCCCCCGGGGCCAAAAGACCCGGGGGGCCGGGGG....GCGGCCCCCCC.GGCGGGTCGCCGAGGCa                                                          <  2:3484496/96‑1 (MQ=9)
                                           aTGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCg                                                       <  2:767480/101‑1 (MQ=25)
                                            gggcgggCCCCGGCACCCCCGGCGGCCCGGGCGGTTTCCCCCGGGGGCAAAAGACCCGGGGGGCCGGGGGG....GGGA..CCCCCGGGCGGGTCGCCGAGGCATCg                                                       <  2:472147/97‑1 (MQ=255)
                                               ggggCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTc                                                   <  1:1852478/101‑1 (MQ=25)
                                               ggggCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGCGGCGTccgctc                                                   >  2:3883360/1‑96 (MQ=18)
                                                 ggCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGGGCCGGGGCGGCGGCTC.gg                                                >  2:4418041/1‑101 (MQ=16)
                                                        g.ATCCCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATc                                        <  2:1569853/101‑1 (MQ=21)
                                                            cccggggggcCGGGGCGGTTTCCACCGGGGGCAAAAGATCCGGGGGGTCGGGGGG....GGGGC.CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATccgt                                     <  1:4002500/94‑3 (MQ=12)
                                                             cccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCtt                                    <  1:1128621/100‑1 (MQ=21)
                                                              ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGGGGGACCGCCCC.CGCGGAAACCCCtt                                    >  2:1305341/1‑101 (MQ=9)
                                                               cggcggCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAg                                  <  1:3565725/101‑1 (MQ=25)
                                                                ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGt                                 <  1:4327313/101‑1 (MQ=25)
                                                                  cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGCGGGATCGCCCC.GGC.GAAAACCCCTTGTaa                               >  1:2896382/1‑101 (MQ=12)
                                                                   ggcCGGGGCGGCTTTCACCTGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTaaa                              <  2:1204711/101‑1 (MQ=21)
                                                                   ggcCCGGGCGGCTTTCCCCGGGGGCCAAAGATCCCGGGGGTCGGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTaaa                              <  2:3384193/101‑1 (MQ=21)
                                                                    gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAg                             <  1:3967738/101‑1 (MQ=25)
                                                                    gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGCGGGCCCCCCTC.CGC.GAACACCCTTCGTaaaa                             >  2:2540011/1‑100 (MQ=9)
                                                                     ccggggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGa                            <  2:224891/98‑1 (MQ=21)
                                                                     ccggggCGGC.TTCCCCCGGGGGCAAAGGACCCGGGGGGCCGGGGG....GCGGA.CCCCCGGGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGa                            <  1:2911336/98‑1 (MQ=255)
                                                                      ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGGGGGAACGCCCC.CGCGGAAAACCCtcgtcaaaac                            >  1:3262484/1‑92 (MQ=2)
                                                                       cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGGGGGATCGCCCC.GGCGGAAAACCCtcttcaaaaac                           >  2:3401721/1‑91 (MQ=9)
                                                                       cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGGGGCGTCGCCCCGGGG.GAAACCCCTTGTTAAAAAc                           >  1:3856951/1‑101 (MQ=9)
                                                                        gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGGGCCGCGGCATCGGCTC.GCC.GGACGCCCCTAATAAACAccg                         >  1:493771/1‑101 (MQ=9)
                                                                         ggcggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGAccgc                        <  2:4730808/101‑1 (MQ=25)
                                                                         ggcggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGAccgc                        <  1:3557513/101‑1 (MQ=25)
                                                                          gcggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGAccgcc                       <  2:2817226/101‑1 (MQ=25)
                                                                           cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGAccgccc                      <  2:3193896/101‑1 (MQ=25)
                                                                            ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGAGGGATCGCCCC.CGC.GGAAACCCTTTGTAAAAAacgcccc                     >  1:784390/1‑100 (MQ=9)
                                                                             gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGGGCCGAGGGATCGCCCC.CGC.GAAAACCCTTAGTAAAAAacgccccc                    >  1:4642127/1‑99 (MQ=12)
                                                                             gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGAGGCATCGCCCC.GGC.GAAATCCCTTTGTAAAGAccgcccgc                    >  1:2296432/1‑101 (MQ=21)
                                                                               tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCCCCTC.CGC.GTAAAACCTTACTAAAAAACACCCCCgg                  >  1:2909700/1‑101 (MQ=9)
                                                                                ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCCGGGGATCGCCCC.CGC.GAAAAACCCTAGTAAAAAacgccccccgg                 >  1:3726270/1‑96 (MQ=2)
                                                                                 tCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGCCCGCCCGCGGAc                <  1:2561865/101‑1 (MQ=21)
                                                                                 ccccgtGGGGCAAAAGACCCCGGGGGCCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGAc                <  2:2763526/96‑1 (MQ=18)
                                                                                   aCCGGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAg              <  2:4450498/101‑1 (MQ=21)
                                                                                        gggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGGCCAGGCCGCGCCCC.CTC.GGAAATCCTTAGTAAAAAACCCCCGCCGACAGGGGTc         >  1:1537311/1‑101 (MQ=2)
                                                                                         ggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATcc        <  2:3021403/101‑1 (MQ=21)
                                                                                           ccAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGAGGCATCGCCCC.CGC.GAAAACCCCTAGTAAAAACCGCCCGCGGACAAGGAGCCGa      >  2:3109316/1‑101 (MQ=12)
                                                                                            cAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGGGGGCTCGCCCC.CGG.GGAAACCCCTAGTAAAGAACGCCCCCGGGCAGGGGTCCGaa     >  1:2729159/1‑101 (MQ=0)
                                                                                            cAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGCGGGATCGCCCC.GGC.GAAAACCCTTAGTAAAAAACGCCCGCGGGCAGGGATCCgga     >  2:4675243/1‑99 (MQ=9)
                                                                                            cAAAGACCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGaa     <  1:4262192/101‑1 (MQ=21)
                                                                                             aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg    <  1:1548351/101‑1 (MQ=21)
                                                                                             aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGCAGAATCGCCTC.GGC.GCAAAGCCCTCTTTATTACCGCCCCCGGACAGGGAGGCGAAg    >  2:2596258/1‑101 (MQ=0)
                                                                                             aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGAGGGCTCGCCTC.CGC.GCAAACCCCTTCTAAAAACCCCCCCCGGGGAggggaccgcag    >  1:1864919/1‑93 (MQ=0)
                                                                                             aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGAGGCATCGCCTC.GGC.GAAAACCCTTAGTAAAAAACGCCCGCGGGCAGGGATCCGAAg    >  1:2147643/1‑101 (MQ=18)
                                                                                              aaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGGCGGGGGGTCGCCCC.CGCGGAAACCCCTTA.TAAAAACCGCCCGCGGGCAGGGAGCCGGAgg   >  1:1042408/1‑101 (MQ=0)
                                                                                               aGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGt  <  2:540983/101‑1 (MQ=25)
                                                                                               aGATCCCGGGGGTCCGGGGGCGGAG.....CCCCC.GGCGGGGCGCCGAGGGATCGCCTC.GGC.GAAATCCCCTAGTAAAAACCCCCCGCGGGCCAGGATCCGCAggg  >  2:2844906/1‑100 (MQ=9)
                                                                                                     |                                                                                                      
CGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGG.ATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGGG....G.....CCCCC.GGCGGGTCGCCGAGGCATCGCCTC.GGC.GAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGT  >  NC_014034/2330182‑2330372

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG