| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,866 | C→T | 19.0% | intergenic (+678/‑253) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,866 | 0 | C→T | 19.0% | 155.4 ‑1.2 ‑0.0 | 299 | intergenic (+678/‑253) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (34/23): ref base (125/117): total (159/140) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.04e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.98e-01 | ||||||||||
Only 100 of 327 total aligned reads displayed.
CGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGT > NC_014034/1395766‑1395966
|
cgCCCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgc < 1:2727344/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcg > 2:420409/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcg > 1:1682939/1‑101 (MQ=255)
ccTCCCCCCGCGGGGGCGTGGCTCGAAACAATGCGGCGCGGG..GCTA.TGGCTGACTGCCCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcgt < 2:2349851/100‑2 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcg.cc > 1:1673164/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGCTCGAACCTGcg.ccg > 2:4282814/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.Ct > 1:627157/1‑101 (MQ=255)
cgcgGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTAt < 2:4605929/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCg > 2:41301/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCg < 2:1688436/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCg > 1:3743411/1‑101 (MQ=255)
ggggCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCa > 1:2243367/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCAt > 2:2867094/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCAt < 1:2421373/101‑1 (MQ=255)
cGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCg > 1:3143783/1‑101 (MQ=255)
gTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCgg > 1:3068584/1‑101 (MQ=255)
gTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCgg > 2:3892616/1‑101 (MQ=255)
gATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCg > 2:2830722/1‑101 (MQ=255)
aTCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGa < 1:1305538/101‑1 (MQ=255)
tCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAg < 2:4574921/101‑1 (MQ=255)
tCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAg < 1:1115833/101‑1 (MQ=255)
tCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAg < 2:214027/101‑1 (MQ=255)
cGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgc < 1:3094044/101‑1 (MQ=255)
cGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgc > 1:3564269/1‑101 (MQ=255)
gAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcg > 1:2987602/1‑101 (MQ=255)
gAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcg > 2:2499260/1‑101 (MQ=255)
aaaC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcgc > 2:1083415/1‑101 (MQ=255)
aaaC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAgcgc > 1:3229331/1‑101 (MQ=255)
aC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGcgcc.g > 1:681798/1‑101 (MQ=255)
aC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGcgcc.g < 2:3334322/101‑1 (MQ=255)
cTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCc.gcg < 2:570155/101‑1 (MQ=255)
tGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.gcg.c > 2:2054214/1‑101 (MQ=255)
gcgTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTc < 2:1943930/101‑1 (MQ=255)
cgTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCg > 2:2731048/1‑101 (MQ=255)
cgTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCg < 2:2929731/101‑1 (MQ=255)
gTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGc > 2:2560557/1‑101 (MQ=255)
tGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCt > 1:2187064/1‑101 (MQ=255)
aGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTcc > 1:4178247/1‑101 (MQ=255)
tGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTccccc > 1:1590180/1‑101 (MQ=255)
gCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTcccccc > 2:1331500/1‑101 (MQ=255)
gCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTcccccc < 1:388804/101‑1 (MQ=255)
cAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCcgc < 1:1571376/101‑1 (MQ=255)
gTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCgg > 2:1183303/1‑101 (MQ=255)
tGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCggg < 1:1822897/101‑1 (MQ=255)
aTAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCggggg > 1:410959/1‑101 (MQ=255)
tAGAC.GCCGTGGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGc < 1:1456901/101‑1 (MQ=255)
c.GCCGTGGACGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTgg < 2:670166/101‑1 (MQ=255)
c.GCCGTGGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTgg < 2:1634283/101‑1 (MQ=255)
ccaacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2477875/10‑101 (MQ=9)
ggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTg > 1:926766/8‑101 (MQ=2)
ggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTg > 1:2635031/8‑101 (MQ=2)
caacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3640321/93‑1 (MQ=9)
caacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:1051135/9‑101 (MQ=9)
cGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2805819/101‑1 (MQ=255)
gTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:6282/101‑1 (MQ=255)
gTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:1083501/101‑1 (MQ=255)
cgcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGCGCCAT.GAATTC.A...TCGAGCGCCATCGAGC.GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:451413/97‑1 (MQ=2)
cctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:1761965/96‑1 (MQ=9)
cggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3799758/98‑1 (MQ=2)
ggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGCC.GCT.GC.GTCGCTTCCCCCGCGGGGGCGTGGATCg < 1:3496942/99‑1 (MQ=0)
ggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTCTGGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:187100/3‑101 (MQ=2)
gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:3182962/101‑1 (MQ=255)
gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:4505871/1‑101 (MQ=255)
gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:1760687/101‑1 (MQ=255)
atgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaa > 1:1901382/3‑100 (MQ=9)
atgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:10341/3‑101 (MQ=9)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg < 2:2244124/101‑1 (MQ=255)
gTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCCCGGGGGCGTGGCTCGAAAcaa > 1:836167/1‑99 (MQ=9)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAt < 2:329580/101‑1 (MQ=9)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGAt > 1:1540437/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGAt > 1:2900858/1‑101 (MQ=255)
cGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAtn < 1:288399/101‑2 (MQ=9)
cGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATg < 1:1163300/101‑1 (MQ=9)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGc > 2:729288/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCgg < 1:2763678/101‑2 (MQ=9)
tCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.TTCGCTCCCCCCCCGGGGGCGTGGACCGAAACGATCCGt > 2:336464/1‑101 (MQ=38)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt > 2:792497/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt > 2:1794338/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt < 2:2424630/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt < 1:2143891/101‑1 (MQ=255)
caccccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggc > 1:329750/3‑99 (MQ=9)
cccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTc > 2:4665457/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCa < 1:2560709/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCAt > 1:3354545/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCAt < 1:2939178/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCAt < 1:4340982/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcc > 2:54909/1‑92 (MQ=2)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgggggcct > 1:1475855/1‑91 (MQ=2)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TGGGGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcct < 2:473844/101‑11 (MQ=2)
ggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACg > 1:50225/1‑101 (MQ=255)
ggATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCggg < 2:3051919/101‑1 (MQ=255)
gATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGc < 2:3952884/101‑1 (MQ=255)
gATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGc > 2:2655055/1‑101 (MQ=255)
cGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAgg > 2:2156573/1‑100 (MQ=255)
cGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGt > 2:155039/1‑101 (MQ=255)
gAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTg > 1:3935720/1‑101 (MQ=255)
aaaCTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTgg < 1:4665713/101‑1 (MQ=255)
tGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTg < 1:2499404/101‑1 (MQ=255)
gcg.cCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTgg > 2:1259768/1‑101 (MQ=255)
cg.ccgc.CTATCGCATCCGG...TCGAGGGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGt < 1:3892858/101‑1 (MQ=255)
|
CGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCGGCGTGAGTTGCCAGTGATAGAC.GCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TCGAGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGT > NC_014034/1395766‑1395966
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|