| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,696,181 | T→A | 3.8% | intergenic (‑109/+116) | RCAP_rcc01564 ← / ← mmsA | isobutyryl‑CoA dehydrogenase/methylmalonate‑semialdehyde dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,696,181 | 0 | T→A | 3.8% | 14.8 ‑2.5 ‑0.0 | 235 | intergenic (‑109/+116) | RCAP_rcc01564/mmsA | isobutyryl‑CoA dehydrogenase/methylmalonate‑semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (7/2): ref base (101/125): total (108/127) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.42e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.84e-01 | ||||||||||
Only 100 of 242 total aligned reads displayed.
CCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAAGGGCAGCTTGCCCCTCATGGCCTTTCGG.C.AATTCCACCCGGGAAGGTTGGGCCAAAGGGTGAAACCACCCTGGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGGCGCGGCCC > NC_014034/1696082‑1696283
|
cAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.CTAATTca > 2:3324462/1‑100 (MQ=255)
aaGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.C.CAATTCAcc > 1:1730017/1‑101 (MQ=255)
aGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.C.CAATTCAccc < 1:2971853/101‑1 (MQ=255)
gTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.C.CAATTCAcccc < 1:1126888/101‑2 (MQ=37)
gTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.C.CAATTCAcccc > 2:2406485/1‑100 (MQ=255)
gCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.C.CAATTCAcccccg > 2:1341969/1‑98 (MQ=37)
cTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCCCCTCGCCTTTCGGCC.CATTCACCCCGGGa > 1:186739/1‑101 (MQ=25)
tGAATTTAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGat < 2:1152016/101‑2 (MQ=255)
tGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGat < 2:651641/101‑2 (MQ=255)
tGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGat > 1:2765204/1‑100 (MQ=37)
gAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGatg < 1:4090014/101‑3 (MQ=25)
aaTTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGatgt < 1:3610571/101‑4 (MQ=255)
aaTTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGG.C.CAATTCACCCCGGGAGGt > 1:1269887/1‑101 (MQ=255)
aaTTGAACGTCTGTTTAATTTAGAATCCTTGAACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGatgt > 1:2699879/1‑98 (MQ=255)
aTTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGatgtt < 1:2224912/101‑5 (MQ=255)
tGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTg < 1:710718/101‑1 (MQ=255)
gAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTgg < 2:3179951/101‑1 (MQ=255)
gAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTgg < 2:4478891/101‑1 (MQ=255)
gAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTgg > 1:4372930/1‑101 (MQ=25)
aaCGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTggg > 1:3949002/1‑101 (MQ=255)
cGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGcc < 1:1725647/101‑1 (MQ=255)
cGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGcc > 2:3068815/1‑101 (MQ=25)
gTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCa < 2:3264884/101‑1 (MQ=25)
tCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaa > 2:2887537/1‑101 (MQ=255)
cTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCCCCCCCGGTTGTTTGGGCCatg > 2:4744232/1‑99 (MQ=19)
cTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAG.AGGGGAGC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCAaag > 2:4590206/1‑100 (MQ=255)
tGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaagg < 1:3908399/101‑3 (MQ=19)
gTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggt < 1:928700/101‑4 (MQ=255)
tttAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtg < 1:4719475/101‑5 (MQ=255)
ttAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtga < 1:571282/101‑6 (MQ=16)
ttAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtga > 1:4652297/1‑96 (MQ=255)
ttAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtga < 1:2432864/101‑6 (MQ=16)
tAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtgaa < 1:3531895/101‑7 (MQ=255)
tAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtgaa < 1:2939372/101‑7 (MQ=255)
aaTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtgaaa < 2:1171172/101‑8 (MQ=255)
aaTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCaaggtgaaa < 2:672659/101‑8 (MQ=255)
aTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAac > 2:1888661/1‑101 (MQ=255)
cGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTTGGTCAA..GGTGAAacacct > 2:3486337/1‑97 (MQ=255)
gAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacacctt < 1:782048/101‑6 (MQ=255)
aaTCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttg > 2:4522496/1‑95 (MQ=255)
aaTCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttg < 2:468101/101‑7 (MQ=12)
ccTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgctt < 2:2765040/101‑10 (MQ=12)
ccTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgctt > 1:2591201/1‑92 (MQ=255)
ccTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgctt < 1:4234604/101‑10 (MQ=9)
ccTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgctt > 2:3613016/1‑92 (MQ=255)
gCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTc < 2:2563312/101‑1 (MQ=255)
aCGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCtt < 1:1057439/101‑1 (MQ=9)
cGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg > 2:3849871/1‑101 (MQ=255)
cGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg < 2:4117171/101‑1 (MQ=255)
cGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg < 1:1365413/101‑1 (MQ=255)
cGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg < 1:3842979/101‑1 (MQ=255)
cGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg < 1:653614/101‑1 (MQ=255)
cGAATTTTGCAAGGAGGCGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg < 2:4266530/101‑1 (MQ=255)
gAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTgg < 2:509463/101‑1 (MQ=255)
aTTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgcg < 2:1926297/101‑1 (MQ=255)
ttttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgcgc > 2:2030324/1‑101 (MQ=9)
tttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCa > 1:1940386/1‑101 (MQ=255)
tttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCa > 1:2371884/1‑101 (MQ=255)
tttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCa > 1:3023257/1‑101 (MQ=255)
tGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCaaa > 2:4299910/1‑101 (MQ=9)
gCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAAt > 1:4199260/1‑101 (MQ=255)
gCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAAt < 2:1727680/101‑1 (MQ=9)
gCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTG.TTTCA.CCTTGCTTTTTCTTGGCGCAAAt < 2:3028697/101‑1 (MQ=2)
cAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATa < 1:1334362/101‑1 (MQ=255)
aaGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CACCTT.GCTTTTTCTTGGCGCAAATAc < 1:4300157/101‑1 (MQ=255)
aaGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATAc > 2:4569099/1‑101 (MQ=9)
aaGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATAc > 1:1508644/1‑101 (MQ=9)
aggaggGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACg < 1:4175932/101‑1 (MQ=9)
aggGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCct < 2:1293761/101‑1 (MQ=9)
aggGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCct < 1:3767219/101‑1 (MQ=9)
gggAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCctct < 2:4372683/101‑1 (MQ=255)
gaggggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CACCTT.GCTTTTTCTTGGCGCAAATACGCCTCTGGcc < 2:1813504/92‑1 (MQ=9)
gaggggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGcc < 2:835501/92‑1 (MQ=9)
aggggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGccc < 1:1119077/93‑1 (MQ=255)
aggggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGccc > 2:179491/9‑101 (MQ=16)
aggggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGccc < 2:2097078/93‑1 (MQ=255)
ggggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCg > 2:2633761/8‑101 (MQ=12)
gggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGa > 1:1666108/7‑101 (MQ=16)
ggcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGaa < 1:2806646/96‑1 (MQ=16)
gcgctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAg < 1:1582882/97‑1 (MQ=255)
gctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAggg < 1:3324664/99‑1 (MQ=255)
ctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGc < 1:3661463/100‑1 (MQ=255)
ctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGc < 2:418517/100‑1 (MQ=255)
ctGCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGc < 2:3821435/100‑1 (MQ=255)
gCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCaa < 2:2964375/101‑1 (MQ=255)
gCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCaa < 1:421007/101‑1 (MQ=255)
gCCCCTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCC.AAGGG.GAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCaa > 1:3388995/1‑101 (MQ=19)
ccTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGcc < 2:368081/101‑1 (MQ=255)
cTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAAC..CCCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCcg < 1:4029361/101‑1 (MQ=19)
cTCCTGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCcg < 1:2242794/101‑1 (MQ=255)
ctGGCCTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCgcgc < 2:142872/100‑1 (MQ=19)
ccTTTCGGCC.AATTGACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGaa < 2:1236462/101‑1 (MQ=19)
ccTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGaa < 1:1923404/101‑1 (MQ=19)
cTTTCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAg > 2:2162204/1‑101 (MQ=255)
ttCGGCC.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGgc > 1:265520/1‑101 (MQ=255)
tcggcc.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGgcg > 2:2583068/6‑101 (MQ=255)
tcggcc.AATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGgcg > 2:2299640/6‑101 (MQ=255)
ggcc.AATTCACCCCGGGATGTTTGGGCCAA..GGCGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGGcgcg > 1:1643640/4‑101 (MQ=19)
aaTTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGGCGCGGccc < 2:737674/101‑1 (MQ=25)
aaTTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGGCGCGGccc > 1:4413879/1‑101 (MQ=255)
|
CCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAAGGGCAGCTTGCCCCTCATGGCCTTTCGG.C.AATTCCACCCGGGAAGGTTGGGCCAAAGGGTGAAACCACCCTGGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCCGCGCCGAAGGCGCGGCCC > NC_014034/1696082‑1696283
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|