| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,372 | G→C | 2.4% | intergenic (‑168/‑137) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,372 | 0 | G→C | 2.4% | 4.2 0.0 ‑1.3 | 207 | intergenic (‑168/‑137) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (3/2): ref base (110/92): total (113/94) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.47e-02 | ||||||||||
Only 100 of 234 total aligned reads displayed.
GGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTG > NC_014034/2249273‑2249471
|
ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc < 1:110420/101‑1 (MQ=255)
ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc < 2:482480/101‑1 (MQ=255)
gCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa < 2:3136736/101‑1 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 2:3472424/101‑1 (MQ=255)
tctgcccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..Gc > 1:14326/6‑101 (MQ=255)
cttcccccGTCCCGTGCCGGGTCT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 1:4425168/97‑1 (MQ=255)
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 1:3605719/97‑1 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 2:60642/3‑101 (MQ=255)
cccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCaga > 2:4300532/2‑101 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATCTCGCGGGGTGTGAA.TGGCGCA..GCCagag < 2:3586635/101‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg > 1:2206632/1‑101 (MQ=255)
ccgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCAGGGGGGTGAA.TGGCGCA..GCCAGAggg < 2:1978608/101‑1 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAgggg > 2:2556298/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:3924319/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:1634417/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:3880444/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 1:1781634/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa > 2:2747181/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:285407/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGTAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAg.c > 2:4617883/1‑101 (MQ=255)
tGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cc > 2:1468707/1‑100 (MQ=255)
ccGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cc > 1:3550859/1‑101 (MQ=255)
gggACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccc > 2:2239127/1‑101 (MQ=255)
ggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.cg.c < 1:2744523/101‑1 (MQ=17)
ggACTCCCCCCGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.cg.c < 1:527047/101‑1 (MQ=17)
gACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccc > 1:4029250/1‑100 (MQ=255)
actccccccGGG.ATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAG.CG.ccc < 2:412404/97‑1 (MQ=17)
aCT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccct > 2:4380080/1‑99 (MQ=255)
cT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGT..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccctt < 1:2472012/101‑4 (MQ=255)
t.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttc < 2:3059914/101‑5 (MQ=255)
t.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttc < 1:1557905/101‑5 (MQ=255)
cccccccGGGAATTTTGGAGGAAAGAGGAG...GGGG..GGTTTTCTTTTTGCAAAAATTACCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccct < 1:3981906/99‑3 (MQ=12)
cccccGTC.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttcg < 1:756246/101‑6 (MQ=255)
cccccGGG.ATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCCt < 2:3851935/101‑1 (MQ=0)
cccccGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttcg < 1:4528552/101‑6 (MQ=255)
cccGGG.ATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCCtgc < 2:4544891/101‑3 (MQ=0)
cccGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTcgcg > 2:1272730/1‑101 (MQ=255)
ggg.ATATTTGGGGCAAGAGGAG...GGGG..GGCTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.GGGCGGA..GCCAGAGGGGGGCAG.CGCCCCCCTTCgcgggc < 1:988755/101‑1 (MQ=25)
gg.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCgcgggcg > 1:2113736/1‑101 (MQ=255)
tatTTGAGGCAAGATGAG...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGcc < 2:3019066/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGcc > 2:2176177/1‑101 (MQ=255)
tatTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGcc < 1:3167913/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGccc > 1:106802/1‑100 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCcg > 2:1946907/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATGTCCCGGGGGGTGAA.TGGCGGA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCcgc < 1:2774647/101‑1 (MQ=37)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCcgcg < 2:264081/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGa > 1:3362466/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAc < 1:1953156/101‑1 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAc < 1:2674363/101‑1 (MQ=255)
aaaGATGAG...GGGG..GGTTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGGGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgcgc < 1:4168614/100‑1 (MQ=25)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgcgcg > 2:3307546/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgcgcg > 2:1824702/1‑101 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGcg.cc < 1:4351254/101‑1 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGGGGCCGCGACGCGgg.ccg > 1:2914682/1‑101 (MQ=25)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGcg.ccg < 2:1350217/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAAc < 2:244620/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTCGCAGAAAATAGCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAAc < 1:230433/101‑1 (MQ=37)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAg > 2:658265/1‑101 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAgg > 2:4531718/1‑101 (MQ=255)
ggCTTTGATCTTGCCGAAACTAGCCCGGGGGGTGAA.TGGCGCA..GCCAGGGGGGGGCGG.CGCCCCCCTTCGCGGGCGGCCGCGAGGCGCG.CCGCAACAGGTc < 2:4687873/101‑1 (MQ=25)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTc < 1:3663229/101‑1 (MQ=255)
gCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.GGCCCCCCTTCCCGGGCGGCCGCGCGGCGCG.CCGCacaaggccg > 2:1752640/1‑93 (MQ=25)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGc > 2:1795035/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCGG.CC.CCCCCCTCGCGGGGCGCCCCGACGCGGGCCCGAAACAGGCGGTGcc > 2:2356170/1‑101 (MQ=16)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCtt > 2:3402257/1‑101 (MQ=255)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGt > 2:230904/1‑101 (MQ=255)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGt < 1:674676/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCCC.CCCCCTTCGCGGGGGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAt < 1:1468801/101‑1 (MQ=38)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAt < 1:3002827/101‑1 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:9936/1‑101 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCt > 1:4276132/1‑101 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 1:2056425/1‑101 (MQ=255)
atatCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTGGTGCCCCTTTGTCCTTCTg > 1:422611/1‑101 (MQ=37)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCCACCGGTCGTGCCCCGTTGTCATTCTGTCGc > 2:4243977/1‑101 (MQ=38)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGc > 1:4316619/1‑101 (MQ=255)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGc > 1:1764809/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa < 1:2215507/101‑1 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGCCATTCTGTCGCa > 1:3894795/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 1:708522/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCGGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:2810997/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:1074043/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:4075529/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:4103246/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:2543109/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 2:3721327/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:4208839/1‑101 (MQ=255)
gggTGAA.GGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 1:382215/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg > 1:3321197/1‑101 (MQ=255)
ggTGAA.TGGCGCA..GACGGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCCACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 1:4618136/101‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:2440840/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:4012377/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 2:68389/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:3586526/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAAAAGGTCGTGCCCCTTTGTCTTTCTGTCGCACCCATGTCATa > 1:1706688/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAGCCC.CCCCCGTCGCGGGCGGCCACGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:310059/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:1160350/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:3635237/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg > 2:836456/1‑101 (MQ=255)
cgcA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt > 1:1215679/1‑101 (MQ=255)
cgcA..GCCAGAGGGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 2:811978/101‑1 (MQ=255)
|
GGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGG.ATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCCTTCGCGGGCGGCCGCGACGCGCG.CCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTG > NC_014034/2249273‑2249471
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|