BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,640,174	G→A	100%	intergenic (‑150/+126)	thrS ← / ← RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,640,174	0	G→A	100.0%	409.9	149	intergenic (‑150/+126)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand): new base (48/96): ref base (0/1): total (48/101)

Only 100 of 158 total aligned reads displayed.


GCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCC  >  NC_014034/2640078‑2640272


 cgcCGGGTATGCGACGCNGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCAcccc                                                                                                <  2:1979548/101‑1 (MQ=255)


  gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCAccccc                                                                                               <  1:2447537/101‑1 (MQ=255)


  gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCAccccc                                                                                               <  2:4035110/101‑1 (MQ=255)


   ccGGGTGTGCGACGCGGCGGCAGGCGTGTCTGCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGGTG.CCCCCCTC.TTGGCCTTCGGCCAATTCAcccccc                                                                                              <  1:4354347/101‑1 (MQ=25)


   ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCAcccccc                                                                                              <  1:3504033/101‑1 (MQ=255)


   ccGGGGATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCAcccccc                                                                                              <  1:764371/101‑1 (MQ=37)


    cGGGTATGCGACGCGGCGGGAGGCGTGTCAACCGTGGCGCTTTTGCGTAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTGACCCCCCg                                                                                             <  2:4273933/101‑1 (MQ=25)


    cGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCGCCCTCTTTCC.CTTCCGCCAATTCACACCCCg                                                                                             >  1:1989316/1‑101 (MQ=37)


      ggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAg                                                                                           <  1:2650889/101‑1 (MQ=255)


        tATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGt                                                                                         <  2:1228405/101‑1 (MQ=255)


         aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTa                                                                                        <  2:708431/101‑1 (MQ=255)


           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAtt                                                                                      <  1:809415/101‑1 (MQ=255)


           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAtt                                                                                      <  2:200493/101‑1 (MQ=255)


           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAtt                                                                                      <  1:1167135/101‑1 (MQ=255)


           gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAtt                                                                                      <  1:1056033/101‑1 (MQ=255)


            ggACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAttt                                                                                     <  1:3689283/100‑1 (MQ=255)


            cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAttt                                                                                     <  2:1958958/101‑1 (MQ=255)


            cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAttt                                                                                     <  2:761649/101‑1 (MQ=255)


            cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTAttt                                                                                     <  1:1413955/101‑1 (MQ=255)


            cGACGCGGCGGCAGGCGTGTCAACCGCGGCTCTTTTCCGCAGACAAAAGGGGAGCGCTG.CCCCCTTC.TTGGCCTTCGGTCAATTCCCCCCCCGAGGTAttt                                                                                     <  2:1561819/101‑1 (MQ=255)


             gaggcggcgGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCGCCCCCCGAGGTATTTg                                                                                    <  2:2556442/98‑1 (MQ=255)


             gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTg                                                                                    <  2:4405852/101‑1 (MQ=255)


              aCGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTgg                                                                                   <  1:218594/101‑1 (MQ=255)


                 cggcggCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGagc                                                                                <  1:3961578/101‑3 (MQ=255)


                  gggggcCGGCGTGTCAACCGTTGCGCTTTTGCGCAGGCAAAGGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCa                                                                               <  1:1490855/98‑1 (MQ=21)


                     ggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGa                                                                            <  2:3240426/101‑1 (MQ=37)


                      gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTCTTTGG.CTTCGGCCCATTTACCCCCCCAGGTAttttgggcaaaga                                                                           >  2:1361193/1‑91 (MQ=25)


                      gcAGGCGTGTCAACCGTGGCGCTTCTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                                           <  1:2344927/101‑1 (MQ=25)


                         ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa                                                                        <  1:3058003/101‑1 (MQ=25)


                         ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa                                                                        <  1:4281870/101‑1 (MQ=25)


                          gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                                       <  2:4425031/101‑1 (MQ=25)


                          gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                                       <  2:2911592/101‑1 (MQ=25)


                          gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                                       <  1:2814169/101‑1 (MQ=25)


                           ggtgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTCTTTGC.CTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaaag                                                                      <  1:361249/100‑2 (MQ=25)


                              gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                                                   <  2:3277733/101‑5 (MQ=25)


                              gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                                                   <  2:1861871/101‑5 (MQ=21)


                                 aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                                               <  2:1804605/101‑1 (MQ=21)


                                  aCCGGGGCGCTTTGGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                                              <  2:188200/101‑1 (MQ=21)


                                    cGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCCCC.TTGG.CTTCTGCCAATTCCCACCCCCCGGGATTTTGGGCAAGATGAAAAAACAAAggg                                                             >  1:567806/1‑101 (MQ=255)


                                     gTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt                                                           <  2:1884910/101‑1 (MQ=25)


                                     ctGGTGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt                                                           <  1:1475094/100‑1 (MQ=21)


                                      tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                          <  1:4109557/101‑1 (MQ=25)


                                      tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                          <  1:1837944/101‑1 (MQ=25)


                                       ggCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCa                                                         <  1:3999301/101‑1 (MQ=25)


                                        gcgcTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt                                                        <  2:2220102/101‑1 (MQ=25)


                                                   gccccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGTCTTCGGGCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat                                            <  1:3862236/95‑1 (MQ=9)


                                                   cAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa                                             <  2:1112464/101‑1 (MQ=25)


                                                    ccccgaaaAGGGGGCTCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAata                                           <  1:1989155/96‑1 (MQ=17)


                                                    aGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                            <  1:4694603/101‑1 (MQ=21)


                                                    aGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                            <  2:2473578/101‑1 (MQ=25)


                                                     ggCAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAata                                           <  2:3246101/101‑1 (MQ=25)


                                                      ccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATc                                         <  2:2346504/98‑1 (MQ=17)


                                                      ccgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATc                                         >  2:4203224/4‑101 (MQ=17)


                                                       cgaaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATcc                                        >  1:3545823/3‑101 (MQ=9)


                                                       cAAAAGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc                                         <  2:3398727/101‑1 (MQ=25)


                                                        caaaGGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATcc                                        <  2:2358587/100‑1 (MQ=21)


                                                         aaaGGGGGGCGCTC.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGTGGTATTTGGAGCAAGATG.AAAGACTATGGGTTCATCTTGCCTCAAATATccc                                       <  1:3142659/101‑1 (MQ=18)


                                                         aaaAGGGGGCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                      <  1:4557588/101‑1 (MQ=17)


                                                          aaagggggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                     >  2:490676/4‑101 (MQ=17)


                                                            ggggggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                                    >  1:3464504/1‑101 (MQ=21)


                                                            agggggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                                   <  1:2454564/100‑1 (MQ=18)


                                                             gggggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg                                  >  2:2963111/1‑101 (MQ=18)


                                                              ggggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg                                 >  1:920075/1‑101 (MQ=18)


                                                               gggCGCTG.CCCCCCTC.TTGGCCTTCGGGCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                                 <  1:3107933/101‑1 (MQ=25)


                                                               gggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg                                <  1:2542500/101‑3 (MQ=18)


                                                               gggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGCGGGATTTGGAGAAAGATGAAAA.ACCATGGGTTCATCTTTCCTCAAATATCCCgggggg                                 >  2:4276616/1‑101 (MQ=21)


                                                               gggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCCCGGCATTTTGAGCAAGATG.AAAGACCATGGGGTCATCTTTCCTCAAATATCCCcggggg                                 >  2:1127926/1‑101 (MQ=16)


                                                                ggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                <  2:3708193/101‑1 (MQ=25)


                                                                ggCGCTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                <  2:4654299/101‑1 (MQ=25)


                                                                 gcgcTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag                              <  2:2658265/101‑5 (MQ=21)


                                                                 gcgcTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAg                               <  1:3925227/101‑1 (MQ=25)


                                                                  cgcTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGt                              <  1:2353004/101‑1 (MQ=25)


                                                                   ccTG.CCCGCTTA.TTGGCCTTCGGCCAAATCTCCCCCCGGGAAATTTGCGTGAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                            <  2:1188943/100‑7 (MQ=21)


                                                                    cTG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcc                            <  1:1923838/101‑1 (MQ=25)


                                                                     tG.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                           <  1:3350898/101‑1 (MQ=25)


                                                                      g.CCCCCCTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGGATTTTGAGCAAGATG.AAAGACCATGGGGTCATCTTGCCTCAAATATCCCGGGGGGGGTCCTg                          >  1:2907301/1‑101 (MQ=25)


                                                                         cccccTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa                        <  2:3327975/101‑1 (MQ=37)


                                                                          ccccTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa                       >  1:3286893/1‑101 (MQ=37)


                                                                           cccTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg                      <  1:3399039/101‑1 (MQ=37)


                                                                           cccTC.TTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg                      <  2:2289244/101‑1 (MQ=37)


                                                                             ctc.tTGGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa                    >  1:1723413/1‑101 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  1:4490279/5‑101 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  1:726826/5‑101 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  2:4381375/5‑101 (MQ=37)


                                                                                   ggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg               >  1:2561448/4‑101 (MQ=37)


                                                                                      cTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc            >  2:2452919/1‑101 (MQ=37)


                                                                                         cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga         <  2:3464292/101‑1 (MQ=255)


                                                                                         cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga         >  1:2789889/1‑101 (MQ=37)


                                                                                         cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGAGGGCaga         >  2:4177219/1‑101 (MQ=37)


                                                                                            ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc      <  2:3257122/101‑1 (MQ=255)


                                                                                            ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc      <  2:2352536/101‑1 (MQ=255)


                                                                                             cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGAGGGGGCCCTGAAAGGACGGGGGGCAGAGccc     >  2:629234/1‑101 (MQ=25)


                                                                                              aaTTCACCCCCCGAGGTATTTGGGGCAAGATG.AAAGACCGTGGGATCATCTTGCCTCAAATATCGCGCCGGGAGTCCTGAAAGGAGGGGGGGCACAGcgcc    >  2:3818712/1‑101 (MQ=19)


                                                                                              aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc    >  2:2778012/1‑101 (MQ=255)


                                                                                              aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc    >  2:2727196/1‑101 (MQ=37)


                                                                                              aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc    >  2:1247573/1‑101 (MQ=255)


                                                                                               aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc   >  2:16762/1‑101 (MQ=37)


                                                                                               aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc   >  1:4674788/1‑101 (MQ=255)


                                                                                               aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc   >  1:1362666/1‑101 (MQ=255)


                                                                                                ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc  >  2:2976754/1‑101 (MQ=25)


GCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTG.CCCCCCTC.TTGG.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCC  >  NC_014034/2640078‑2640272

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG