Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,255,986 Δ1 bp 5.3% intergenic (+156/+86) RCAP_rcc01184 → / ← RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,255,9860G→. 5.3% 26.5 0.0 ‑0.8206intergenic (+156/+86)RCAP_rcc01184/RCAP_rcc01185CsbD family protein/methyl‑accepting chemotaxis sensory transducer
Reads supporting (aligned to +/- strand):  new base (6/5):  ref base (108/86):  total (114/92)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.74e-01

Only 100 of 226 total aligned reads displayed.

GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.A.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGCG  >  NC_014034/1255895‑1256085
                                                                                             |                                                                                                     
ccccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.gggggggggg                                                                                              <  2:4295401/91‑1 (MQ=21)
 gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGa                                                                                             <  2:829012/92‑1 (MQ=21)
 gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGa                                                                                             <  2:2940760/92‑1 (MQ=255)
 gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGa                                                                                             >  1:1667949/10‑101 (MQ=255)
  ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGaa                                                                                            >  2:3338797/9‑101 (MQ=255)
   cccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGCAc                                                                                           >  2:3002205/8‑101 (MQ=255)
    ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACt                                                                                          <  1:4927706/95‑1 (MQ=255)
     cccgtcccTGCGGGCCTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACtt                                                                                         <  1:5003270/96‑1 (MQ=255)
     cccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACtt                                                                                         >  1:2720279/6‑101 (MQ=255)
     cccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACtt                                                                                         >  1:2402168/6‑101 (MQ=255)
      ccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTc                                                                                        >  2:283333/5‑101 (MQ=255)
         tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTcccc                                                                                     >  2:706835/2‑100 (MQ=255)
         tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCg                                                                                     <  1:2168085/100‑1 (MQ=255)
         tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCgc                                                                                    <  2:3873504/100‑2 (MQ=255)
          cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCga                                                                                    >  1:4696566/1‑101 (MQ=255)
          cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCga                                                                                    >  1:483523/1‑101 (MQ=255)
            cTGGGGAACCCCCCCCGGGATTTTACCGCTAAGGGAAAA.TGGACCCGCGTCTCGGTTTTCACCGTGGGCCAAAAAGCCG.GGGGGGGGGGAACTTCCCga.a.g                                                                                <  1:4274305/101‑1 (MQ=255)
               cGGGCCTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaa                                                                             <  1:697055/101‑1 (MQ=255)
               cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaa                                                                             >  2:3750857/1‑101 (MQ=255)
                gggACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaaa                                                                            >  2:4637941/1‑100 (MQ=255)
                gggACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaaa                                                                            >  1:748553/1‑100 (MQ=255)
                gggACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGa.a.ggaaag                                                                           >  1:1257413/1‑99 (MQ=255)
                gggACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCCTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaaa                                                                            >  2:2570156/1‑100 (MQ=255)
                gggACTCCCACCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaaa                                                                            >  2:483576/1‑100 (MQ=255)
                 gggccccccccGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaaag                                                                           <  2:233391/96‑3 (MQ=21)
                 ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGa.a.ggaaag                                                                           <  1:2271911/101‑3 (MQ=255)
                   aCTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAagag                                                                          <  1:672999/101‑1 (MQ=255)
                     cccccccGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCCGGGCTTTCACCTTGGGCCAAAATTCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAggg                                                                        <  1:3116570/100‑1 (MQ=21)
                      ccccccGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAgggg                                                                       >  2:1926712/1‑101 (MQ=255)
                       cccccGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAggggg                                                                      >  1:4144309/1‑101 (MQ=255)
                        cccgGGAATTTTCCCGCAAAGGGAAAA.GGACCCGGGGGCCCGGTTTTCCCCTTGGCCAAAATA.CCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGc                                                                    <  1:4945260/101‑1 (MQ=255)
                        ccccGGGATATTTCCGCCAAGGGGAAA.TTGACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAgggggg                                                                     <  1:2435760/101‑1 (MQ=37)
                           cGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAg                                                                  >  1:4092580/1‑101 (MQ=255)
                            gggATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAgg                                                                 <  2:2737199/101‑1 (MQ=255)
                               atatTTCCGCCAAGGGGAAA.TGAACCCGGGGGGGGGCTTTCATCTTGGGCCAAATAACCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGcc                                                              <  2:2401994/101‑1 (MQ=255)
                               atatTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGcc                                                              >  1:3280464/1‑101 (MQ=255)
                               atatTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGcc                                                              >  1:3009889/1‑101 (MQ=255)
                                tatTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGccc                                                             <  2:1667820/101‑1 (MQ=255)
                                 atTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGGGGGGcccc                                                            >  2:3612316/1‑101 (MQ=25)
                                   ttCCGCCAAGGGAAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCtt                                                         <  2:1838630/101‑1 (MQ=37)
                                    tCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCGGGGCCCCCtt                                                         >  1:1708599/1‑101 (MQ=255)
                                      ccgcgaGGGGAAAGTGAACCGGGGGCGCGGCTTCCCCCTGGGGCCAAAT.TGCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTc                                                       <  1:4029617/96‑1 (MQ=255)
                                      cGCCAGGGGGAAA.TGGACCCGGGGCGCGGCTTTCCCCTGGGGCAAAATACCCG.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTc                                                       <  2:1021634/101‑1 (MQ=255)
                                      cGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTc                                                       >  2:1116261/1‑101 (MQ=255)
                                       gCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTcc                                                      <  1:4792736/101‑1 (MQ=255)
                                        ccAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTccc                                                     <  2:3390113/101‑1 (MQ=255)
                                        ccAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTccc                                                     >  1:2018828/1‑101 (MQ=255)
                                        ccAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTccc                                                     >  2:383507/1‑101 (MQ=255)
                                           aGGGAAAA.GGACCCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGCGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGAt                                                  <  2:4362862/101‑1 (MQ=37)
                                            ggggAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATc                                                 <  1:4638264/101‑1 (MQ=255)
                                             gggAAA.TGACCCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCg                                                <  2:4967118/101‑1 (MQ=255)
                                               gAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCggg                                              >  1:1598558/1‑101 (MQ=255)
                                                 aa.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc                                            <  2:4079880/101‑1 (MQ=255)
                                                  a.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc                                           >  1:3573447/1‑101 (MQ=255)
                                                  a.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc                                           >  1:3387789/1‑101 (MQ=255)
                                                    tGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCg                                          >  1:4730573/1‑101 (MQ=255)
                                                     gAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCgg                                         <  2:3445080/101‑1 (MQ=255)
                                                     gAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCgg                                         >  2:356091/1‑101 (MQ=255)
                                                     gAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCgg                                         >  2:2796475/1‑101 (MQ=255)
                                                         ccGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGcc                                     >  1:3389830/1‑101 (MQ=255)
                                                         ccGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGcc                                     >  1:2574703/1‑101 (MQ=255)
                                                          cGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGCCCGGTGCcg                                    >  2:4001349/1‑101 (MQ=255)
                                                            gggCGCGGCTTTCCCCTTGGGCCAAATATCCCGGGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCcgc                                   <  2:3512916/101‑1 (MQ=38)
                                                            gggCGCGGCTTTCACCTTGGGCCAAATATCCCGGGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCcgc                                   >  1:145147/1‑101 (MQ=38)
                                                                gcgGCTTTCCCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCTGc                              <  2:145568/101‑1 (MQ=38)
                                                                gcgGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGc                              <  1:3751135/101‑1 (MQ=255)
                                                                 gggCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCa                             <  2:4885187/100‑1 (MQ=255)
                                                                  ggCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGGCGGTGCCGCGCGGCAg                            >  1:1510725/1‑101 (MQ=255)
                                                                   gCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGGCGGGCCCGCGCGGCAgg                           >  2:1544381/1‑101 (MQ=38)
                                                                    cTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAggg                          >  1:1180404/1‑101 (MQ=255)
                                                                    cTTTCACCTGGGGCCAAATATCAG.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAggg                          <  2:1606184/101‑1 (MQ=255)
                                                                      ttCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgggcc                        >  1:1963187/1‑99 (MQ=255)
                                                                      ttCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTc                        <  2:4697719/101‑1 (MQ=255)
                                                                      ttCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTc                        <  2:2477012/101‑1 (MQ=255)
                                                                      ttCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTc                        <  2:2137581/101‑1 (MQ=255)
                                                                         cccTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTg                     <  2:221372/100‑1 (MQ=255)
                                                                         atcTTGGGCCAAATACCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTg                     <  1:1926849/99‑1 (MQ=255)
                                                                         aCCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTg                     >  2:4390683/1‑101 (MQ=255)
                                                                          ccTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg                    >  2:544203/1‑101 (MQ=255)
                                                                           cTTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGcc                  >  2:4447441/1‑101 (MQ=255)
                                                                            ttGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCCCGGCAGGGACTTGGcc                  >  2:1245292/1‑101 (MQ=39)
                                                                            ctGGGCTAAATATCCC.GGGCGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGcc                  <  1:2966787/100‑1 (MQ=255)
                                                                            ctGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGcc                  <  2:1295932/100‑1 (MQ=255)
                                                                             tGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCg                 >  1:1378924/1‑101 (MQ=255)
                                                                             tGGGCAAAATGTCCG.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCg                 <  1:183286/101‑1 (MQ=255)
                                                                               ggCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCGGt               >  1:1972078/1‑101 (MQ=255)
                                                                                   aaaTATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAgg           <  2:263195/101‑1 (MQ=255)
                                                                                   aaaTATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAgg           >  1:4583316/1‑101 (MQ=255)
                                                                                   aaaTATCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCGGGCAgg           >  1:1351020/1‑101 (MQ=255)
                                                                                    tctacccc.GGGGGGGGGCAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggc          <  2:494836/96‑1 (MQ=255)
                                                                                     atatCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcg         <  1:383560/101‑1 (MQ=255)
                                                                                      tatCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcgg        <  2:3034031/101‑1 (MQ=255)
                                                                                      tatCCC.GGGGGGGGGGAACTTCCCAAGG.GAAAAAGGGGGGAGGGGCCCCCTTCCCGGTCCGGGGCCGGCCCCCCCGGGCGGGGCCTTGGCGggctcggcgg        >  2:3243650/1‑93 (MQ=255)
                                                                                       atCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcggg       >  2:587072/1‑100 (MQ=255)
                                                                                       atCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcggc       <  1:283367/101‑1 (MQ=255)
                                                                                       atCCC.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGGCTTGGCCGGGCAggcggc       >  1:2673474/1‑101 (MQ=255)
                                                                                         ccc.GGGGGGGGGGAACTTCCCGN.AGGNNNGNGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgc     <  1:2796677/101‑1 (MQ=255)
                                                                                         ccc.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgc     <  1:401676/101‑1 (MQ=255)
                                                                                           c.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgcgc   >  1:1046152/1‑101 (MQ=255)
                                                                                           c.GGGGGGGGGGAACTTCCCGA.AGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgcgc   <  2:4726203/101‑1 (MQ=255)
                                                                                             |                                                                                                     
GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAA.TGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGA.A.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGCG  >  NC_014034/1255895‑1256085

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG