| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,301,094 | Δ1 bp | 94.8% | intergenic (+51/‑58) | urtA → / → urtC | urea ABC transporter permease UrtA/urea ABC transporter permease UrtC |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,301,094 | 0 | C→. | 94.8% | 9.3 ‑4.0 ‑0.7 | 96 | intergenic (+51/‑58) | urtA/urtC | urea ABC transporter permease UrtA/urea ABC transporter permease UrtC |
| Reads supporting (aligned to +/- strand): new base (69/22): ref base (1/4): total (70/26) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.82e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.19e-01 | ||||||||||
Only 100 of 130 total aligned reads displayed.
CCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.GCG.CCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGTCCCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCT > NC_014034/1300995‑1301189
|
ccgcccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGTc > 1:2416786/1‑101 (MQ=255)
cccgcGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGTccgg < 1:2800993/101‑3 (MQ=255)
cgcgggGCCTTATGGCTCTGCGCAGCCCCGCAGCCCGAGATTGTTGCGATCCTCCCCGCGGC.CCTTT.CATCTTGCCCAAAATAT.CCCGCGGGCGTCCGggg < 2:1617404/101‑1 (MQ=2)
cgcgcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGTCCGggg < 1:3967450/101‑1 (MQ=37)
gcgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGg.cg > 2:1275/1‑101 (MQ=25)
cgGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAC.CCCGCGGGGGT.CCGGGGg.cgc < 1:2868389/101‑1 (MQ=25)
ggCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.cgcg > 1:4910590/1‑101 (MQ=25)
ggCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.cgcg > 2:311167/1‑101 (MQ=25)
gCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.a < 2:4803338/101‑1 (MQ=25)
gCATCATCGCGCTGCGCGGCCGCGCCGCCGAAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.a > 1:4491521/1‑101 (MQ=25)
catcatCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.aa < 1:3271943/101‑1 (MQ=25)
atcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAg < 1:889432/101‑1 (MQ=25)
atcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGG.CCCGGGGG.CGCG.AAg > 1:3926057/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGc < 2:4969777/101‑1 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGc > 1:411082/1‑101 (MQ=25)
tcatcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGc > 1:1118985/1‑101 (MQ=25)
catcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGcc > 1:3711062/1‑101 (MQ=25)
atcGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGccc < 1:535931/101‑1 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGccccc < 2:2787966/101‑1 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGccccc > 1:4912834/1‑101 (MQ=21)
cgcgCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGccccc < 1:1362394/101‑1 (MQ=21)
cccgcTCCGCGGCCGCCCCGCCGGGGATTGAGCCGATCCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGccccc < 1:2705499/99‑1 (MQ=17)
gcTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.GGCG.AAGCCCCCGgc > 1:420725/1‑101 (MQ=21)
gcTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGgc > 1:1942272/1‑101 (MQ=21)
cTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGgcg > 2:1490039/1‑101 (MQ=21)
cTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGgcg > 2:2584095/1‑101 (MQ=21)
cTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGgcg > 2:3530275/1‑101 (MQ=21)
gccgcgccgcCGGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAg > 2:4012780/1‑101 (MQ=18)
gccgcgccgcCGGAGATTGAGCCGATCCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAC.CCCGCGGGGGT.CGGGGGG.CGCG.AACCCCCCGGCGCCGCCAg < 2:2357785/101‑1 (MQ=18)
gccgcgccgcCGGAGATTGAGCCGATCCCCCCCC.CCGCCCTTT.CATCTTGCCCAAAATAC.CCCG.GGGGGGCCCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAg < 1:1494990/101‑1 (MQ=18)
gccccgccgcCGGAGATGGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATCT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAg < 2:3837737/101‑1 (MQ=18)
cgccgtgtaTTGAGCCGTTCCCCCCCG.CCGCCCTTT.CATCTGGCCCAAAATAT.CCCG.GGGGGGCCGGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCgg < 2:605952/93‑1 (MQ=17)
cgccgGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CTTCTTGCCCAAAATAT.CCCGCGGGGG.CCCGGGGG.CGCG.AAGCCCCCNGCGCCGCCAGATCCCgg > 2:2478749/1‑101 (MQ=21)
gccgGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGga > 1:3064413/1‑101 (MQ=18)
cgggAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCAAAAATAT.CCCGGGGGGGT.CGGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGgag < 2:3409927/99‑1 (MQ=18)
cgGAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCCGATCCCGgaga > 1:3984899/1‑101 (MQ=18)
ggAGATTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCCGATCCCGGAGAc > 1:989219/1‑101 (MQ=18)
agaTTGAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGAccc > 2:4121686/1‑101 (MQ=18)
ggaccgcctcccccccG.CCG.CCTTTCCATCTCGCCAAAAATAC.CCCG.GGGGGGCCGGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGAt < 2:2138429/91‑1 (MQ=16)
gAGCCGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATg > 1:750878/1‑101 (MQ=18)
gCCGATCCCCCCCC.CCGCCCTTT.CACCTGGCCAAAAACA..CCCGGAGGGGGGCCGGGGG.CGCG.AGTCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGac < 2:2459131/101‑1 (MQ=255)
cGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 1:4092646/1‑101 (MQ=18)
cGATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGacac > 2:3148702/1‑101 (MQ=18)
gATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGAcaca > 1:3222320/1‑101 (MQ=18)
gATGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGAcaca > 1:2177997/1‑101 (MQ=18)
cccccccccG.CCC.CCTTT.CCTCTTCCCCAAAAAAC.CCCGGGGGGGGCCGGGGGC.CGCG.AACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAg < 1:3767468/98‑1 (MQ=255)
aTGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAg > 2:2336907/1‑101 (MQ=18)
aTGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAg > 1:4155046/1‑101 (MQ=18)
aTGCCCCCCG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAg > 1:4268916/1‑101 (MQ=18)
ccccccG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCg > 2:3423254/1‑101 (MQ=18)
ccccccG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCg > 1:2552671/1‑101 (MQ=18)
ccccG.CCGCCCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGAt > 2:1887432/1‑101 (MQ=18)
cccgccgcccTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATg > 2:2337523/9‑101 (MQ=21)
ccgccgcccTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGa > 2:2749180/8‑101 (MQ=21)
gccgcccTTT.GATCTTGCCCAAAATAT.GCCGCGGGGGT.CAGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGTTTCCGGAGACCCCGATGACACAGCCGATGGcc > 1:50632/6‑101 (MQ=18)
gccgcccTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGAcc > 1:536429/6‑101 (MQ=255)
ccTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAgg > 1:2565637/1‑101 (MQ=255)
cTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATGCCGGAGACCCCGATGACACAGCCGATGACCCAAggg > 2:1592174/1‑101 (MQ=255)
cTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAggg > 1:2908406/1‑101 (MQ=255)
cTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAggg > 1:3523926/1‑101 (MQ=255)
cTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAggg > 2:2015032/1‑101 (MQ=255)
ttt.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGt > 2:2004929/1‑101 (MQ=255)
ttt.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGt > 1:2666427/1‑101 (MQ=255)
tt.CATCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGtt > 1:3116602/1‑101 (MQ=255)
tt.CATCTTGCCCAAAATAT.CCCGCGGGGG.CCCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGACCCCGGCGACCCGGATGACACGGGCGAGGACCCAAGGGtc > 1:2153828/1‑100 (MQ=18)
tccctCTTGCCCAAAATCC.CCCG.GGGGGGCCGGGGGG.GGGA.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGtt < 2:3064175/97‑1 (MQ=255)
tcttcgtcccAAAAGTT.CCCGGCGGGGACCCGGGGC.CGCG.AAGCCCCGGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTc < 2:3925765/94‑1 (MQ=255)
tagattGCCCAAAAGCA.CGCGCTGGGGT.CCGGGGG.CGCG.GTGCCCCCGGCGCCTCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTcc < 2:837532/97‑1 (MQ=25)
caccttcccAAAAAATCCCCGGGGGGGTCCGGGGGG.GGCG.ACCCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTc < 2:2240494/95‑1 (MQ=255)
aTCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCt > 2:2778441/1‑101 (MQ=255)
aTCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCt > 2:3487180/1‑101 (MQ=255)
aTCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAACGGTTCCt > 2:4260890/1‑101 (MQ=255)
tCTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTg > 1:2875070/1‑101 (MQ=255)
cTTGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGt > 2:276634/1‑101 (MQ=255)
ttGCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTc > 1:1348568/1‑101 (MQ=255)
ctGCCCAAAA.AT.ACCGCGGGGGGGCCGGGGG.CCCGAAACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGt < 2:3960682/100‑1 (MQ=255)
gCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCa > 2:1613567/1‑101 (MQ=255)
gCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCa > 2:3599283/1‑101 (MQ=255)
gCCCAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCa > 1:740670/1‑101 (MQ=255)
ccccAAATCAC.CCCGCGGGGG.CCGGGGGG.CGCG.AGGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCa < 2:2158863/100‑1 (MQ=255)
cctaaaaTAT.CCTGGGGGGGT.CAGGGTG.CGAG.AAGCCCCCGGCGCCTCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaa < 2:4170565/98‑1 (MQ=37)
cccAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaa > 2:795095/1‑101 (MQ=255)
gccaaaAAT.CCCCCGGGGGGGCCGGGGGCCGCG.AACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCa < 1:4889414/98‑1 (MQ=255)
ccAAAATAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaaa < 2:770966/101‑1 (MQ=255)
aaaaTAT.CCCGCGGGGGT.CCGGGGG.CGCG.AACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCaaaaa < 2:5002060/101‑1 (MQ=255)
aaaTAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAc < 2:4912507/101‑1 (MQ=255)
aaTAT.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAcc > 2:3776990/1‑101 (MQ=255)
tat.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAAcccc > 2:2243008/1‑101 (MQ=255)
at.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCt > 2:4879043/1‑101 (MQ=255)
at.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCt > 1:4930066/1‑101 (MQ=255)
at.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCt > 1:3471210/1‑101 (MQ=255)
t.CCCGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTc < 2:1631840/101‑1 (MQ=255)
ccccccggggGCCCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTc < 1:2268165/95‑1 (MQ=255)
cccGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCg > 1:1989375/1‑101 (MQ=255)
cccGCGGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCg > 1:1978560/1‑101 (MQ=255)
cggggggGCCGGGGGG.CGCG.AACCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGt < 1:4994466/99‑1 (MQ=255)
cgGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGc > 1:3518331/1‑101 (MQ=255)
cgGGGGT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGc > 1:3572407/1‑101 (MQ=255)
gggggT.CCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCt < 2:504716/101‑1 (MQ=255)
cggngNNCGGGGGG.CTCG.AAGCCCCGCTCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAATCCCCTCGGTGc < 1:2478923/100‑1 (MQ=255)
|
CCGCCCGCGCGGCATCATCGCGCTGCGCGGCCGCGCCGCCGGAGATTGAGCCGATGCCCCCCG.GCG.CCTTT.CATCTTGCCCAAAATAT.CCCGCGGGGGTCCCGGGGG.CGCG.AAGCCCCCGGCGCCGCCAGATCCCGGAGACCCCGATGACACAGCCGATGACCCAAGGGTTCCTGTCCAAAAACCCCTCGGTGCT > NC_014034/1300995‑1301189
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|