| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,254,687 | Δ1 bp | 100% | intergenic (+12/‑171) | glpX → / → recJ | fructose‑1,6‑bisphosphatase/single‑stranded‑DNA‑specific exonuclease RecJ |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,254,687 | 0 | G→. | 100.0% | 54.2 | 123 | intergenic (+12/‑171) | glpX/recJ | fructose‑1,6‑bisphosphatase/single‑stranded‑DNA‑specific exonuclease RecJ |
| Reads supporting (aligned to +/- strand): new base (2/103): ref base (17/0): total (20/103) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.66e-19 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.01e-10 | ||||||||||
Only 100 of 169 total aligned reads displayed.
ACCCGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.CCGGGGGGTATGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCGGGGGGGAATTTG > NC_014034/3254587‑3254780
|
aCCCGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACg < 2:4241024/101‑1 (MQ=255)
gAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACggggg < 1:2388307/101‑1 (MQ=255)
aaaTTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggg > 2:3625671/1‑101 (MQ=255)
ttCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactg < 1:3163853/101‑5 (MQ=255)
tCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCggggggggg > 1:1078642/1‑98 (MQ=255)
cATCGAGACCGAGACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCgggggggggg > 1:2738621/1‑97 (MQ=255)
cATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactgcc < 2:3597733/101‑7 (MQ=255)
aTCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACggggggccggcg > 2:4151534/1‑95 (MQ=255)
aTCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactgccg < 2:3447618/101‑8 (MQ=255)
tCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCgggggggggcgg > 2:4202218/1‑95 (MQ=255)
tCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCggggggggccgc > 2:2622236/1‑95 (MQ=255)
tCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCaggggggggggg > 2:1855648/1‑95 (MQ=255)
tCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.ATGc.ccg > 2:1595029/1‑99 (MQ=255)
cGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggggggccctc > 1:1392850/1‑93 (MQ=255)
cGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactgccgtc < 1:748143/101‑10 (MQ=255)
gagaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACgggggactgccgtcc > 1:863665/1‑91 (MQ=255)
agaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCgggggggggcggccc > 1:2716906/1‑92 (MQ=255)
gaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.Tcccc < 2:3744939/101‑1 (MQ=255)
gaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.Tcccc < 2:1101497/101‑1 (MQ=255)
gaCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGGGATCTATCGCAACCCGATCCGCTGAGGCAACGCTACCgggggggggccggccc > 1:2595977/1‑91 (MQ=255)
aCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACCGGGGG.CGGC.CG.Tccccc > 2:2000155/1‑101 (MQ=255)
aCCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.Tccccc < 1:4123047/101‑1 (MQ=255)
cGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGACTG..CG.GCCCCCGc > 2:4131950/1‑101 (MQ=255)
aaCGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCAcc < 2:1203357/101‑1 (MQ=255)
aCGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCAccc < 2:4943824/101‑1 (MQ=255)
aTCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCt < 2:3536668/101‑1 (MQ=255)
aTCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCt < 2:2200959/101‑1 (MQ=255)
aTCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATACGCTGAGGCAACGCT.ACGGGGGG.CTGC.CG.CCCCCCCCCcccccc > 1:2413243/1‑100 (MQ=255)
accTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTg < 1:1139185/100‑1 (MQ=255)
ccTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACACGGGG.CTGCGCG.TCCCCCCCCccccccc > 1:300974/1‑99 (MQ=255)
cTGATGCTCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTgcg < 2:5006776/101‑1 (MQ=255)
cTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTgcg < 2:1225474/101‑1 (MQ=255)
cTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTgcg < 2:1225473/101‑1 (MQ=255)
tGATGCGCCCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTgcgc < 1:4511704/101‑1 (MQ=255)
ggATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTgcgc < 1:984804/100‑1 (MQ=255)
gATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGGGGGC.CG.CCCCCCCCCcccccccccc > 1:3883461/1‑96 (MQ=255)
aTGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGt < 1:2511198/101‑1 (MQ=255)
aTGCGCCCGAAACCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGt < 2:1761916/101‑1 (MQ=255)
tGCGCTCGAAACCCGACTCGGTGCGCCGCGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACACCCTGCGCGTa < 2:3380724/101‑1 (MQ=255)
tGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTa < 1:3802542/101‑1 (MQ=255)
gcgcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGGGGGC.GG.CCCCCCCCCcccccccgcgcgt > 2:606304/1‑93 (MQ=255)
gcgcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.t < 1:4102046/101‑1 (MQ=255)
cgcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.tt < 2:3757239/101‑1 (MQ=255)
tcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.ttt < 2:113710/100‑1 (MQ=255)
gcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.ttt < 1:2454896/101‑1 (MQ=255)
gcTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.ttt < 2:1502133/101‑1 (MQ=255)
cTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.tttt < 1:3383800/101‑1 (MQ=255)
ccgaaccccGGCTCGGTGGGGCGGGGGATCTATCGCAGCCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTg < 2:2678738/94‑1 (MQ=255)
cGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGAATGC.CG.TCCCCCCCACCCCCTTCGCGTT.tttttt > 2:1690751/1‑99 (MQ=255)
gAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGcc < 1:24869/101‑1 (MQ=255)
aaaaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.GCGC.CC.CCCCCCGCCCCCCCCCCGCGCG.ttttttca > 2:154999/1‑97 (MQ=255)
aaaaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCa < 2:3264212/101‑1 (MQ=255)
aaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAg < 1:2363306/101‑1 (MQ=255)
aaCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAg < 1:4973651/101‑1 (MQ=255)
aCCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAgg < 2:4495184/101‑1 (MQ=39)
ccGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.a < 1:4912631/101‑1 (MQ=39)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGC.CG.TCCCCCCCCCCCCCCCCGCGGA.TTTTGCCCAGG.aaa > 2:4874010/1‑101 (MQ=255)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.aaa < 1:803773/101‑1 (MQ=38)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.aaa < 2:52710/101‑1 (MQ=38)
ggCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.aaa < 2:4354334/101‑1 (MQ=38)
tCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACg < 2:3294069/101‑1 (MQ=38)
tCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACg < 1:3459689/101‑1 (MQ=38)
cGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACgg < 2:3788043/101‑1 (MQ=38)
ggTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.GAAACggg > 2:4686994/1‑101 (MQ=38)
ggTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCAACCCCTGCGCGTA.TTTTGCCAAGG.AAAACggg < 2:3428920/101‑1 (MQ=38)
gTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGC.CG.TCCCCCGCCCCCCCTGCGCGGA.TTTTGCCAAGG.aaaaacggg > 2:2428698/1‑96 (MQ=37)
cgcCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCg < 1:1186500/101‑1 (MQ=38)
gcCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGC.CG.GCCCCCCCACCCCCCGCGCGGA.TTTTGCCCAGGAAAAACGGGGcgg > 2:1351487/1‑99 (MQ=255)
ccGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGGGGGGC.GGCCCCCCCCCCCCCCCCGCGCGT..TTTTTCCAGGA.AAAAAGGGGcggg > 1:3701196/1‑98 (MQ=255)
gggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTc < 1:2134276/101‑1 (MQ=38)
gggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTc < 1:4681595/101‑1 (MQ=38)
gggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTc < 1:35759/101‑1 (MQ=38)
ggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCa < 1:1336623/101‑1 (MQ=38)
ggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCa < 2:2651208/101‑1 (MQ=38)
ggTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCa < 2:2357809/101‑1 (MQ=38)
tGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCAcc < 1:606383/101‑1 (MQ=38)
gATCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.GGGC.CG.TCCCCCCCACCCCCCCCCCCGA.TTTTTCCCAGG.AAAAAGGGGGCGGTTGAccc > 1:3014124/1‑100 (MQ=255)
tCTATCGCAACCCGATCCGCTGAGGCAACGCT.ACGGGGGG.CTGC.CG.TCCCCCCCACCCCCCGCGCGTATTTTTCCCAGGG.AAAACGGGG.CGTTTCACCCTg > 2:4795371/1‑101 (MQ=255)
cTATCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTgg < 1:1855781/101‑1 (MQ=38)
aTCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCCCCCCTTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGc..c < 1:1661387/101‑1 (MQ=255)
tCGCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..Cg < 2:40796/101‑1 (MQ=38)
gCAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGaa < 1:4940112/101‑1 (MQ=38)
cAACCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGaaa < 1:716970/101‑1 (MQ=38)
aaCCCGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAat < 2:2513724/101‑1 (MQ=38)
cccGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAatat < 2:775468/101‑1 (MQ=38)
cccGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAatat < 1:4595005/101‑1 (MQ=38)
ccGATCCGCTGAGGCAACGCTACGGGGGGGGGCCC.CC.CCCCCCCCCCCCCCCCCGCGT..TTTTTCCAAGA.AAAAAGGGGCGGGTTTCCCTTGGcgcaaaatc > 1:2977942/1‑93 (MQ=255)
cGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.cc < 1:5029297/101‑1 (MQ=38)
cGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.cc < 2:4636215/101‑1 (MQ=38)
cGATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.cc < 2:4882179/101‑1 (MQ=38)
gATCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.ccc < 1:4585089/101‑1 (MQ=38)
aTCCGCTGAGGCAACGCT.ACGGGGGG.GGGC.CGCCCCCCCCCCCCCCCCCCCCCCT.TTTTTCCAAGA.AAAAAGGGGCCGTTTCCCCTTGCC..CGAAAAAC.ccc > 1:504632/1‑101 (MQ=255)
tCCGCTGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCgg < 2:3165245/101‑1 (MQ=38)
tGAGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCggggggg < 1:4588626/101‑1 (MQ=38)
gAGGCAACGCT.AC.GGGGGACGGC.CG.CCCCCCGCACCCCCTGCGCGGC.TTTTTGCAAGG.AAAACAGGGGCGGTTCTCCTCGGCTGCGAAATA..CCAggggggg > 2:3364709/1‑101 (MQ=255)
aGGCAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCGGGGGGGaa < 2:278420/101‑1 (MQ=38)
cAACGCT.ACGGGGGG.CTGC.CG.GCCCCCCCCCCCCCCCCGCGGA.TTTTTCCAAGG.AAAACGGGGCCGGTTCACCTTTGG..CGCAAAATCCCCGGGGGGGAAtt > 2:4565034/1‑101 (MQ=255)
cAACGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCGGGGGGGAAttt < 1:3816169/101‑1 (MQ=38)
aaCGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCGGGGGGGAATTTg < 1:188463/101‑1 (MQ=38)
aaCGCT.AC.GGGGGACTGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCGGGGGGGAATTTg < 1:4687317/101‑1 (MQ=38)
|
ACCCGAAATTCATCGAGACCGAAACGATCCTGATGCGCTCGAAAACCGGCTCGGTGCGCCGGGTGATCTATCGCAACCCGATCCGCTGAGGCAACGCT.CCGGGGGGTATGC.CG.TCCCCCGCACCCCCTGCGCGTA.TTTTGCCAAGG.AAAACGGGGCCGTTTCACCTTGGC..CGAAATAT.CCCGGGGGGGAATTTG > NC_014034/3254587‑3254780
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|