Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 985,690 | Δ1 bp | 100% | intergenic (+29/‑55) | betB → / → betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 985,690 | 0 | C→. | 100.0% | 39.7 | 162 | intergenic (+29/‑55) | betB/betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Reads supporting (aligned to +/- strand): new base (36/110): ref base (14/0): total (50/112) | ||||||||||
Fisher's exact test strand distribution p-value = 2.04e-08 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.26e-10 |
Only 100 of 197 total aligned reads displayed.
GCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCC.GGTCCCCCCCCGGACCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGG > NC_014034/985593‑985785
|
gATCGAGCCCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGAcccccc < 1:787082/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGAcccccc < 2:3385823/101‑1 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCCGCccccccc > 2:3158725/1‑101 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCGGGccccccg > 2:3127732/1‑100 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGCgcccccc > 2:1336781/1‑101 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGCCCCCCCCg > 1:2381828/1‑101 (MQ=255)
aGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGG.GGGCCCCCCCCGGCccccccccgg > 1:4440886/1‑98 (MQ=255)
aGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGt < 1:569008/101‑1 (MQ=255)
gCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTa < 1:1839797/101‑1 (MQ=255)
aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTAtt < 1:3333585/101‑1 (MQ=255)
aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTAta < 1:1183924/101‑2 (MQ=255)
cTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTAttt < 1:1303879/101‑1 (MQ=255)
cTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTAttt < 1:884021/101‑1 (MQ=255)
cTATACGCAGGTGAAGGCCATCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTAttt < 1:2844416/101‑1 (MQ=255)
gtgcGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGGGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTgc < 2:18950/98‑1 (MQ=255)
ataCGCAGGTGAAGGCCGTCTATGTGGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTgc < 1:927550/101‑1 (MQ=255)
ataCGCAGGTGAAGGCCGTCTATGTCGTCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGCCCCCCCGGGCGATTTTg > 1:3108011/1‑101 (MQ=255)
ataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTgc < 1:123158/101‑1 (MQ=255)
ataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGA.CCCCCCGGCGTAttttg > 2:2736830/1‑99 (MQ=255)
gCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCa < 2:4834885/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAg < 1:3543675/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAg < 1:2551694/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAg < 2:110038/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAg < 2:1162603/101‑1 (MQ=255)
gTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaa < 1:3133819/101‑1 (MQ=255)
gTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaa < 2:1532447/101‑1 (MQ=255)
tGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaa < 1:4163443/101‑1 (MQ=255)
gAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaaa < 2:4099211/101‑1 (MQ=255)
aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaaaa < 1:4959766/101‑1 (MQ=255)
ggCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAc < 2:3231764/101‑1 (MQ=255)
ggCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAc < 2:1450978/101‑1 (MQ=255)
ccGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAg < 1:4050763/101‑1 (MQ=255)
ccGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCGGA.CCCCCCGGCGGATTTGCGCCAAGAAAAAACAg > 2:535820/1‑101 (MQ=38)
gTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAggg < 1:1844705/101‑1 (MQ=255)
tCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCGGACCCCCCC.GCGGATTTTCCCCAAGAAAAAAAAgggg > 1:678733/1‑100 (MQ=255)
cTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGtt < 2:1021677/101‑1 (MQ=255)
cTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGtt < 2:1508307/101‑1 (MQ=255)
cTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGtt < 2:159731/101‑1 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGG.GGGCCCCCCCCCCCCCCCCCCCCCGGTTTTGCCCCAAAAAAAAAAAggga > 1:1087090/1‑100 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTc < 2:4760612/101‑1 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTc < 1:4179484/101‑1 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCGGACCCCCCGGGCG.CTTTGGGGCAAGAAAAAACAGGGTTc > 1:1482065/1‑101 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGACCCCCCC.GCGGGTTTTCGCCCAGAAAAAACAGGGGTc > 2:3087374/1‑101 (MQ=255)
tCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACTCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGc < 1:2204518/101‑1 (MQ=38)
ggCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCCGGACCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCa < 1:4439608/101‑1 (MQ=38)
ggCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGGCCCCCCC.GCGGATTTGCGCCCAGAAAAAAAAAGGGTCAGGCag > 1:376019/1‑101 (MQ=255)
aTGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAgg < 1:2251752/101‑1 (MQ=255)
ggCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcg < 2:3981265/101‑1 (MQ=255)
ccGGTCGAGAGCCCTTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcg < 2:4520477/101‑1 (MQ=37)
ccGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTTCGCCAAGAAAAAACAGGGGTTAGGCCGAGGGGcgcg > 2:2155164/1‑101 (MQ=25)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcgcg < 1:716825/101‑1 (MQ=255)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcgcg < 2:678644/101‑1 (MQ=255)
tCGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgat < 2:4002441/101‑1 (MQ=255)
cGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatg < 2:2053540/101‑1 (MQ=255)
cGAGAGCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAAAGGGGTCAGGCAGAGGGGCGCGCgatg > 2:257431/1‑101 (MQ=25)
gagaTCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatgg < 2:1190955/101‑1 (MQ=37)
gagaGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatgg < 2:4180797/101‑1 (MQ=255)
gagaGCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatgg < 1:4877184/101‑1 (MQ=255)
gagaGCCCCTATTGAAACGCAGGCC.GGGG.GGGGCCCCCCCCCCGCCCCCCCGCGGGTTTGGGCCAAAAAAAAAAAGGGGTAAGGCGGCgggggcgggggtg > 2:1805769/1‑91 (MQ=255)
agagCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatgga < 1:3944900/101‑1 (MQ=255)
agagCCCCTATTGAAACGAAGGCC.GGGG.GGCCCCCCCCCGGACCCCCCC.GCGTAATTTGGCCAAGAAAAAACAAGGGTCAGGCAATGGGAcccgcgcgagg > 2:825882/1‑96 (MQ=255)
gagCCCCTATTGAAACGCAGGCC.GGGG.GGGTGCCCCCCCGCCCCCCCCGCGGTATTT.TGCCCAGAAAAAAAAAGGTTCAGGCCGAGGGGcgcgcggggggt > 1:459006/1‑95 (MQ=255)
gagCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGACCCCCCC.GCGTATTTGCGCCCAGAAAAAACAGGGGTCCGGCAGAGGGGCGCGGgatgggt > 2:2983284/1‑99 (MQ=255)
agCCCCTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatggatg < 1:1279622/101‑1 (MQ=255)
agCCCCTATTGAAACGCAGGCC.GGGG.GGGCCCCCCCCGGGCCCCCCCGG.GGATCTGCGCCCAGAAAAAACAAGGTTTAGGCAGAGGGTCGCGCgatggatg > 2:2859977/1‑101 (MQ=255)
ccccTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCg < 2:3499434/101‑1 (MQ=255)
ccTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGa < 1:922301/101‑1 (MQ=255)
cTATTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGACCCCCC..GCGGATTTTCGCCAAAAAAAAAAAAGGGTCAGGCAGAGGGTCGGGCGGGGGAGGCGGGtt > 2:1690565/1‑101 (MQ=255)
aTTGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTa < 1:2167912/101‑1 (MQ=255)
ttGAAACGCAGGCC.GGGGGGGGCCCCCCCCGCGCCCCCCCGGGGTTTTTG.GCCCAAAAAAAAAAGGGGTCGGGGGAAGGGGGGGGCGGTGGAGGCGGGTTa > 2:3529968/1‑101 (MQ=255)
ttGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAt < 1:4695798/101‑1 (MQ=255)
ttGAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAt < 1:4406685/101‑1 (MQ=255)
ttGAAACGCAGGCC.GGGG.GGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAt < 1:1052255/101‑1 (MQ=38)
ttGAAACGCAGGCC.GGGG.GGGCCCCCCCCCGGCCCCCCC.GCGGATTTTCGGCAAAAAAAAACAGGGGTCAGGCAGAGGGGCGCGCGAGGGGTGCGGGTTAt > 1:3036160/1‑101 (MQ=255)
gAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAtgt < 2:3052747/101‑1 (MQ=255)
gAAACGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCGATGGATGCGGATTAtgt > 2:2922174/1‑101 (MQ=37)
aaaCGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAtgtg < 2:2542883/101‑1 (MQ=255)
aaaCGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAtgtg < 1:3868471/101‑1 (MQ=255)
aaCGCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGa < 1:1695913/101‑1 (MQ=255)
aCGCAGGCT.GGGG.GCTCCCCCCCCGGA.CCCCCCTGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGAt < 1:4358992/101‑1 (MQ=38)
ctctggcc.ggtg.GGACCCCCCCCGG.TCCCCCCGGCTTATGTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGTATTATGTGATc < 2:126297/97‑1 (MQ=255)
gCAGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg < 2:1888814/101‑1 (MQ=255)
aGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGtt > 2:446731/1‑101 (MQ=255)
aGGCC.GGGG.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGtt < 2:3758769/101‑1 (MQ=255)
ggcc.gggg.GGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTg < 2:1048385/101‑1 (MQ=255)
tccgatctCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTgggg < 2:2632723/94‑1 (MQ=38)
ggggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGc > 1:4748658/5‑101 (MQ=255)
ggggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGc > 2:740767/5‑101 (MQ=255)
ggggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCGATGGATGCGGATTATGTGATCGTTGGGGc > 1:196922/5‑101 (MQ=38)
gggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCa > 1:825397/4‑101 (MQ=255)
gggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCa > 1:515782/4‑101 (MQ=255)
gggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCa > 2:2419153/4‑101 (MQ=255)
ggggcccccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAg < 1:1905759/96‑1 (MQ=255)
gggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAgg > 2:3946293/2‑101 (MQ=255)
gggTCCCCCCCCGG.GCCCCCCGGCGTATTTTCGCCAAGAAAAAAAAGGGGTCAGGCAGAGGGTTGCGCGAAGGAAGCGGATTAAGTGATCGTTggggatgg > 2:4667025/2‑97 (MQ=25)
ggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGc > 1:4978931/1‑101 (MQ=255)
ggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGc > 2:221639/1‑101 (MQ=255)
ggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCGAGGGATGCGGATTATGTGATCGTTGGGGGAGGc > 2:2763754/1‑101 (MQ=38)
ccccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTggggagatcgga > 1:2632908/1‑93 (MQ=38)
ccccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGATCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCg > 1:2074261/1‑101 (MQ=255)
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GCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCC.GGTCCCCCCCCGGACCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGG > NC_014034/985593‑985785
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|