Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,303,827 +C 3.0% intergenic (+14/+143) urtE → / ← RCAP_rcc01231 urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,303,8271.→C 3.0% 14.3 ‑1.3 ‑0.0230intergenic (+14/+143)urtE/RCAP_rcc01231urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
Reads supporting (aligned to +/- strand):  new base (4/3):  ref base (80/143):  total (84/146)
Fisher's exact test strand distribution p-value = 2.62e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.13e-01

Only 100 of 269 total aligned reads displayed.

TATGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCTC..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCG  >  NC_014034/1303727‑1303919
                                                                                                      |                                                                                               
tATGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.g                                                                                                  <  1:2621061/101‑1 (MQ=255)
 aTGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..c                                                                                               <  1:2264805/101‑1 (MQ=255)
  tgtgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..cc                                                                                              >  1:4696554/1‑101 (MQ=255)
  tgtgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..cc                                                                                              >  1:1535009/1‑101 (MQ=255)
  tgtgCTCAAACGCGGCGCGGAGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..cc                                                                                              >  1:587570/1‑101 (MQ=255)
    tgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGGGCT.G..cccc                                                                                            >  1:2601140/1‑99 (MQ=255)
    tgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..cccc                                                                                            <  2:1273569/101‑3 (MQ=255)
    tgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..cccc                                                                                            >  2:5007804/1‑99 (MQ=255)
       tCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGGGGT.G..CCCc..ctc                                                                                       >  2:14412/1‑99 (MQ=255)
        cAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCc..ctcg                                                                                      >  1:2520295/1‑98 (MQ=255)
        cAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCc..ctcg                                                                                      <  2:4433995/101‑4 (MQ=255)
         aaaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCc..ctcgg                                                                                     <  1:655961/101‑5 (MQ=255)
         aaaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCc..ctccg                                                                                     >  1:89120/1‑97 (MQ=255)
            cgcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCc..ctcggctt                                                                                  >  1:976360/1‑94 (MQ=255)
              cggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCc..ctcggcttcg                                                                                <  2:2195502/101‑10 (MQ=255)
                gcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGcc                                                                                >  1:4002113/1‑101 (MQ=255)
                gcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGcc                                                                                <  2:2241093/101‑1 (MQ=255)
                  gcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTc                                                                              <  2:3496832/101‑1 (MQ=255)
                  gcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGAGGCCCT.G..CCCCCTCGGCTTCGCCTc                                                                              <  1:2866184/101‑1 (MQ=255)
                   cggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCa                                                                             <  2:1609700/101‑1 (MQ=255)
                    ggTGGCGATGGAGGGCGCGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAc                                                                            <  1:3379475/101‑1 (MQ=255)
                    ggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAc                                                                            >  2:1969160/1‑101 (MQ=255)
                       ggCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAcccc                                                                         <  1:4905169/101‑1 (MQ=255)
                        gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAccccc                                                                        <  1:2151027/101‑1 (MQ=39)
                        gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAccccc                                                                        <  1:2432083/101‑1 (MQ=39)
                        gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAccccc                                                                        <  2:1099592/101‑1 (MQ=39)
                        gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCAccccc                                                                        <  1:5008134/101‑1 (MQ=39)
                           aTGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCggg                                                                     <  1:3035408/101‑1 (MQ=39)
                           aTGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCggg                                                                     <  1:1774391/101‑1 (MQ=39)
                           aTGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCggg                                                                     >  1:2214096/1‑101 (MQ=39)
                            tGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.GCCCCCC..CGGCTTCGCCTCCCCCCCcggg                                                                    >  2:4247835/1‑100 (MQ=255)
                            tGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGa                                                                    >  1:1154579/1‑101 (MQ=39)
                            tGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGa                                                                    >  1:2283777/1‑101 (MQ=39)
                             ggAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGaa                                                                   >  1:4749127/1‑100 (MQ=38)
                              gAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGata                                                                  <  1:2486654/101‑1 (MQ=38)
                              gAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGata                                                                  <  2:3758883/101‑1 (MQ=38)
                              gAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGata                                                                  <  2:3174997/101‑1 (MQ=38)
                                  gCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTg                                                              <  2:1158422/101‑1 (MQ=38)
                                   cACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTgg                                                             >  2:2612573/1‑101 (MQ=38)
                                     cGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.GCCCCCC..CGGCTTCGCCTCCCCCCCGGGCTATTTgggg                                                           >  2:2545512/1‑101 (MQ=38)
                                     cGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTgggg                                                           >  2:3097354/1‑101 (MQ=38)
                                         ggACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCCAg                                                       <  1:3734032/101‑1 (MQ=37)
                                          gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGa                                                      <  2:4558502/101‑1 (MQ=37)
                                          gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGa                                                      <  1:1490834/101‑1 (MQ=37)
                                          gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGa                                                      <  2:829838/101‑1 (MQ=37)
                                          gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGa                                                      <  2:89110/101‑1 (MQ=37)
                                           aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAt                                                     >  1:1654152/1‑101 (MQ=37)
                                           aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAt                                                     <  1:4644027/101‑1 (MQ=37)
                                           aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAt                                                     <  2:4691503/101‑1 (MQ=37)
                                            cAGCCTGTCCCGCGAACCCCTTCGCGCCGTGGTCAGCGTTTAGACAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATa                                                    <  2:4501604/101‑1 (MQ=25)
                                             aGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATaa                                                   <  1:3872944/101‑1 (MQ=37)
                                             aGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATaa                                                   <  1:3765603/101‑1 (MQ=37)
                                             aGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATaa                                                   >  2:4164588/1‑101 (MQ=37)
                                              gCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATaaa                                                  <  1:873045/101‑1 (MQ=37)
                                               ccTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAAc                                                 <  2:2506662/101‑1 (MQ=37)
                                                  gTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTTGGGGCAGATAAAcccc                                              >  2:4467064/1‑101 (MQ=37)
                                                    cccGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.GC.CCACT.CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCAt                                            <  1:779683/101‑1 (MQ=37)
                                                     ccGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATc                                           <  2:3830449/101‑1 (MQ=37)
                                                      cgcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATcc                                          <  2:3370006/101‑1 (MQ=37)
                                                      cgcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATcc                                          <  2:2560248/101‑1 (MQ=37)
                                                      cgcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGAGCT.G..CCCCCTCGGCTTCGCCTCACCCCCCGGGTATTTGGGGGAAGATAAACCCCCTcc                                          >  1:1732147/1‑101 (MQ=255)
                                                        cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCtt                                        <  1:2770195/101‑1 (MQ=37)
                                                        cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGACATTTGGGGCAAGATAAACCCCATCCtt                                        >  1:1890715/1‑101 (MQ=37)
                                                         gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCttt                                       <  1:453545/101‑1 (MQ=37)
                                                         gAAACCCTGCGCGCCGTGGTCAGCGGTTAGGCAAGGGGGCGCTGG..CCACT.CGGCTTCTCCTCCGCCCCGGGGTATTTGGGGCAAGATAAACCCCATCCttt                                       >  2:4194134/1‑101 (MQ=255)
                                                          aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCCGGACATTTGGGGGAAGATAAACCCCATCCTTTc                                      >  2:4879946/1‑101 (MQ=37)
                                                            aCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCAc                                    <  2:1374892/101‑1 (MQ=37)
                                                               cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCtt                                 <  2:4986192/101‑1 (MQ=37)
                                                                tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTg                                <  2:2440378/101‑1 (MQ=37)
                                                                  cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGcc                              <  2:739164/101‑1 (MQ=37)
                                                                  cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGcc                              <  2:1068435/101‑1 (MQ=37)
                                                                    cgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGc                            <  2:6747/101‑1 (MQ=37)
                                                                      ccGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCCCCCCCCGGGTATTTGGGGGCAGAAAAAACCCATCCTTTCCCCTTGCCCCaa                          >  1:1016729/1‑101 (MQ=19)
                                                                       cGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCaaa                         <  1:3141813/101‑1 (MQ=37)
                                                                        gTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAat                        <  1:2037190/101‑1 (MQ=37)
                                                                        gTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAat                        <  1:3544100/101‑1 (MQ=37)
                                                                          ggTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCCTCCTTTCACCTTGCCGCAAatat                      >  1:2326328/1‑101 (MQ=25)
                                                                          ggTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAatat                      <  1:2003797/101‑1 (MQ=37)
                                                                          ggTCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAatat                      <  1:3211516/101‑1 (MQ=37)
                                                                            tCAGCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGTCGCAAATATcc                    <  2:1798106/101‑1 (MQ=25)
                                                                               gCGTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCCGGATATTTGGGGCAAAATAAACCCCCTCCTTTCACCTTGCCGCAAATATccccg                 >  2:946423/1‑99 (MQ=25)
                                                                                 gTTTAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggg               >  1:408536/1‑101 (MQ=25)
                                                                                   ttAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggggg             >  2:3422792/1‑101 (MQ=25)
                                                                                   ttAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggggg             <  2:4746623/101‑1 (MQ=37)
                                                                                    tAGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGGTATTTGGGGCAAGATAAACCCCCTCCTTTCACCTTGCCGCAAATATACCggggggg            >  2:2881245/1‑100 (MQ=25)
                                                                                     aGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCCTCCTTTCACCTTGCCGCCAATATCCCgggggggg           >  2:3564486/1‑99 (MQ=25)
                                                                                     aGGCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg           <  1:4164905/101‑1 (MQ=37)
                                                                                      ggCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa          <  1:3581399/101‑1 (MQ=37)
                                                                                      ggCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa          <  1:4863311/101‑1 (MQ=37)
                                                                                      ggCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa          >  1:126080/1‑101 (MQ=25)
                                                                                      ggCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa          <  2:2788975/101‑1 (MQ=37)
                                                                                      ggCAAGGGGGCGAT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATACTTTCACCTTGCCGCAAATATCCCGGGGGGGGa          >  1:4327597/1‑101 (MQ=25)
                                                                                       gCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCCAATATCCCGGGGGGTGaa         >  1:4439375/1‑101 (MQ=25)
                                                                                       gCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa         <  2:4970833/101‑1 (MQ=37)
                                                                                       gCAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa         <  2:917955/101‑1 (MQ=37)
                                                                                        cAAGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt        <  2:2093535/101‑1 (MQ=37)
                                                                                         aaGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt       <  2:1979199/101‑1 (MQ=37)
                                                                                         aaGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAAtt       >  1:5245/1‑101 (MQ=25)
                                                                                          aGGGGGCGCT.G..CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTg      <  2:587491/101‑1 (MQ=37)
                                                                                          aGGGGGCGCT.G..CCCCCACGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTg      <  2:3957089/101‑1 (MQ=37)
                                                                                                      |                                                                                               
TATGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCT.G..CCTC..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCG  >  NC_014034/1303727‑1303919

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG