BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,729,654	+C	95.2%	intergenic (+28/+125)	RCAP_rcc01597 → / ← tpiA	AsnC/Lrp family transcriptional regulator/triose‑phosphate isomerase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,729,654	1	.→C	95.2%	13.6 ‑0.8 ‑0.2	147	intergenic (+28/+125)	RCAP_rcc01597/tpiA	AsnC/Lrp family transcriptional regulator/triose‑phosphate isomerase
Reads supporting (aligned to +/- strand): new base (63/77): ref base (2/5): total (65/82)
Fisher's exact test strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.54e-01

Only 100 of 184 total aligned reads displayed.


GGTGAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.CCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTGCTCCAAATATCCCG  >  NC_014034/1729554‑1729747


ggTGAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.g                                                                                                 <  2:3962652/101‑1 (MQ=255)


  tGAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTTTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.cc                                                                                              >  1:4380745/1‑101 (MQ=255)


  tGAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.cc                                                                                              <  1:557286/101‑1 (MQ=255)


  ggaaaaacTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.cc                                                                                              <  2:1272446/94‑1 (MQ=255)


   gAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGCCCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc                                                                                             >  1:1629429/1‑101 (MQ=255)


   gAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCC.GAGGCGCG.CG.G.cgc                                                                                             >  1:2236648/1‑99 (MQ=255)


      gATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccc                                                                                         >  2:3990076/1‑100 (MQ=255)


       aTCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccct                                                                                        <  1:3883704/101‑3 (MQ=255)


       aTCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGCCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.cccc                                                                                        >  1:4044618/1‑99 (MQ=255)


        tCTACAACGTCACAGCACTTCTGAGCATGGAAGGCATTAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccctc                                                                                       <  1:4316382/101‑4 (MQ=39)


        tCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGGG.CT.G.ccc.ccctc                                                                                       >  1:4802786/1‑98 (MQ=255)


        tCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccctc                                                                                       <  2:613210/101‑4 (MQ=255)


         ttACACCGTCATAGCTCTTCTGAGCGTGGAAGTCATCAAGGCGACGACGATTCTGCCGGTGTGACCGGGTGGGGCAGGGCA.GGGGGGCG.CT.ggctccatct                                                                                        <  2:125566/100‑10 (MQ=255)


         cTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccctct                                                                                      >  2:477136/1‑97 (MQ=255)


          tACACCGTCACAGTACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGTCGCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccctctg                                                                                     <  2:4398230/101‑6 (MQ=38)


          tACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.ccc.ccctctg                                                                                     <  1:4691814/101‑6 (MQ=255)


           aCAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTgg                                                                                     >  1:4175025/1‑101 (MQ=255)


            cAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGc                                                                                    <  2:2531983/101‑1 (MQ=255)


            cAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGc                                                                                    >  1:3404571/1‑101 (MQ=255)


             aaCGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACAATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGcc                                                                                   >  2:3258564/1‑101 (MQ=255)


              aCGTCACAGAACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCt                                                                                  <  1:1440590/101‑1 (MQ=255)


                gTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTcg                                                                                >  2:4558289/1‑101 (MQ=255)


                 tCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTcgc                                                                               >  1:3283904/1‑101 (MQ=255)


                  ctcaGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTcgcg                                                                              <  2:2066743/99‑1 (MQ=255)


                  cacaGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTcgcg                                                                              >  1:774153/1‑101 (MQ=255)


                  cacaGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTcgcg                                                                              >  2:4289166/1‑101 (MQ=255)


                    caGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGCCCTCGCGGc                                                                            >  1:2040564/1‑101 (MQ=255)


                     aGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGcc                                                                           >  2:3483960/1‑101 (MQ=255)


                     aGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGcc                                                                           <  2:784969/101‑1 (MQ=255)


                         cTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTc                                                                       <  2:3326572/101‑1 (MQ=255)


                          ttCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCa                                                                      >  2:4114368/1‑101 (MQ=255)


                          ttCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCa                                                                      >  2:4248345/1‑101 (MQ=255)


                          ttCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATCCa                                                                      >  1:3793212/1‑101 (MQ=255)


                             tGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAccc                                                                   >  2:2032443/1‑101 (MQ=255)


                             tGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAccc                                                                   <  2:1730824/101‑1 (MQ=255)


                             tGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAccc                                                                   >  1:3652100/1‑101 (MQ=255)


                             tGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAccc                                                                   <  2:514161/101‑1 (MQ=255)


                                gCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGGG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAcccccc                                                                >  1:887992/1‑101 (MQ=255)


                                gCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAcccccc                                                                <  1:3803496/101‑1 (MQ=255)


                                gCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAcccccc                                                                <  2:681082/101‑1 (MQ=255)


                                gCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTAAcccccc                                                                >  2:4220328/1‑101 (MQ=255)


                                 cATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCg                                                               >  2:3907111/1‑101 (MQ=255)


                                 cATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCg                                                               <  1:3199646/101‑1 (MQ=255)


                                     gAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCggggg                                                           >  2:2640220/1‑99 (MQ=255)


                                     gAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGat                                                           <  1:2772688/101‑1 (MQ=255)


                                     gAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCC.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCCCCCCCCGGGat                                                           <  2:1807054/101‑1 (MQ=38)


                                      aaGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGata                                                          >  2:4931926/1‑101 (MQ=255)


                                       agagATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGatat                                                         <  2:4434728/101‑1 (MQ=255)


                                        gagaTCAAGTCGACGACGATTCTGCCGGTGTGGCCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATAtt                                                        <  1:4877730/101‑1 (MQ=255)


                                        gagaTCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATAtt                                                        <  2:2236493/101‑1 (MQ=255)


                                          gaTCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTg                                                      >  1:3961736/1‑101 (MQ=255)


                                          gaTCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTg                                                      <  2:1824985/101‑1 (MQ=255)


                                             cAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCcggggaatttgtg                                                   >  1:49888/1‑91 (MQ=37)


                                             cAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAg                                                   >  2:4813055/1‑101 (MQ=255)


                                             cAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAg                                                   >  1:4203719/1‑101 (MQ=255)


                                              aaGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGc                                                  <  1:4890901/101‑1 (MQ=255)


                                              aaGTCGACGACGATTCTGCCGATGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGc                                                  <  1:1092156/101‑1 (MQ=255)


                                               aGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCa                                                 <  1:144976/101‑1 (MQ=255)


                                               aGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCa                                                 <  2:3137955/101‑1 (MQ=255)


                                               aGTCGACGACGATTCTGCCGGTGTGACACGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCa                                                 >  2:2798338/1‑101 (MQ=255)


                                                gTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCaa                                                <  2:2177319/101‑1 (MQ=255)


                                                  cggcgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGa                                              <  1:401191/98‑1 (MQ=255)


                                                  cgacgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGa                                              >  1:229338/1‑101 (MQ=255)


                                                  cgacgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.CCCGCCTCTGGCCTCGCGGCCATTCACACCCAGGGCTATTTGGAGCAAGa                                              >  2:2844631/1‑101 (MQ=38)


                                                   gacgggtaTTCTGCCGGTGGGTCCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCCCCCCCCGGGATATTTGGAGCAAGAt                                             <  1:1187982/94‑1 (MQ=25)


                                                   gacgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGAt                                             >  2:2319231/1‑101 (MQ=255)


                                                    acgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATg                                            >  2:583711/1‑101 (MQ=255)


                                                    acgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATg                                            >  1:3720133/1‑101 (MQ=255)


                                                     cgacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGa                                           <  1:4674953/101‑1 (MQ=255)


                                                      gacgaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGaa                                          >  2:192696/1‑101 (MQ=255)


                                                         gaTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGaaaaa                                       >  1:2213394/1‑101 (MQ=255)


                                                          aTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGTG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAaac                                      <  1:2389927/101‑1 (MQ=255)


                                                          aTTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTTGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAaac                                      <  1:4536116/101‑1 (MQ=255)


                                                            tCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCTTTCACCCCCCGGGATATTTGGAGCAAGATGAAAaacaa                                    <  2:1426467/101‑1 (MQ=255)


                                                             cTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAaacaac                                   <  2:4290317/101‑1 (MQ=255)


                                                               gCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCg                                 <  1:134508/101‑1 (MQ=255)


                                                                gcGGTGTGGCCCGGTCGGGCCGGGCG.GGGGGGCC.GT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCgg                                <  2:2251018/100‑1 (MQ=25)


                                                                 cGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGa                               >  2:316839/1‑101 (MQ=255)


                                                                  ggTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAg                              >  2:1778277/1‑101 (MQ=255)


                                                                   gtgtGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGc                             >  2:4647460/1‑101 (MQ=255)


                                                                   gtgtGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGc                             <  1:1242112/101‑1 (MQ=255)


                                                                    tgtgACGCGGTCGGGCCGGGCA.GGGGGGCG.ATCC.CCC.CCTCTGTCCTCGCGGCCATTCCCCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCAGAGCt                            <  1:342530/101‑1 (MQ=25)


                                                                      tgACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGa                          >  2:373077/1‑101 (MQ=255)


                                                                      tgACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.CCCGCCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGa                          <  1:2844844/101‑1 (MQ=255)


                                                                        aCCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGAtt                        <  2:166959/101‑1 (MQ=255)


                                                                        aCCCGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGAtt                        <  1:137063/101‑1 (MQ=255)


                                                                          ccGGTCGGGCCGTGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGTCCATTCCCCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTc                      <  1:169710/101‑1 (MQ=37)


                                                                          ccGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTc                      <  1:2626453/101‑1 (MQ=255)


                                                                           cGGTCGGGCCGGGCA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCa                     >  1:3032963/1‑101 (MQ=255)


                                                                              gcgggccgggcAGGGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATc                   <  1:2075819/100‑1 (MQ=25)


                                                                              gcgggccgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCt                  <  2:1055253/100‑1 (MQ=255)


                                                                                gggccgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGGGCAAGATGAAAAACAACCAGAGCTGATTTCATCTTg                >  1:3733599/1‑101 (MQ=25)


                                                                                gggccgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTg                <  2:3198466/101‑1 (MQ=255)


                                                                                 ggccgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCAACCCCCGGGATATTTGGAGCAAGATGAAAAACAAGCGGAGCTGATTTCATCTTGc               >  2:2693179/1‑101 (MQ=37)


                                                                                 ggcccgccA.GGGGGGCGCCA.C.CCC.CCTCTGGCCTCGCGGCCATTCCCCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTGc               <  2:3673204/101‑1 (MQ=25)


                                                                                   ccgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGCGATGATTTCATCTTGCTc             >  1:1071985/1‑101 (MQ=25)


                                                                                    cgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTGCTcc            <  2:3806490/101‑1 (MQ=255)


                                                                                    cgggcA.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTGCTcc            >  1:1894693/1‑101 (MQ=255)


                                                                                         a.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAGACAACCGGAGCTGATTTCATCTTGCTCCAAata       >  1:4380126/1‑101 (MQ=255)


                                                                                         a.GGGGGGCG.CT.GCCCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTGCTCCAAata       >  2:2236030/1‑101 (MQ=255)


GGTGAAGATCTACAACGTCACAGCACTTCTGAGCATGGAAGAGATCAAGTCGACGACGATTCTGCCGGTGTGACCCGGTCGGGCCGGGCA.GGGGGGCG.CT.G.CCC.CCTCTGGCCTCGCGGCCATTCACCCCCCGGGATATTTGGAGCAAGATGAAAAACAACCGGAGCTGATTTCATCTTGCTCCAAATATCCCG  >  NC_014034/1729554‑1729747

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG