| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,732,696 | +C | 100% | intergenic (‑120/‑283) | RCAP_rcc01601 ← / → tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,732,696 | 1 | .→C | 100.0% | 15.7 | 72 | intergenic (‑120/‑283) | RCAP_rcc01601/tgt | FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase |
| Reads supporting (aligned to +/- strand): new base (7/58): ref base (4/3): total (11/61) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.66e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.27e-02 | ||||||||||
Only 100 of 101 total aligned reads displayed.
TAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.CC...GGGC..GGGCGG..G..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCC > NC_014034/1732597‑1732784
|
tAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.c < 1:2781130/101‑1 (MQ=255)
tAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.c < 1:1504584/101‑1 (MQ=255)
agagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGAAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.cc > 1:1643396/1‑101 (MQ=255)
gagTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.ccc > 1:4476506/1‑100 (MQ=255)
agTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.cccg > 2:3786240/1‑99 (MQ=255)
agTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.cccg < 1:2435477/101‑3 (MQ=255)
gTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.ccccg > 2:2127875/1‑98 (MQ=255)
gTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cgg < 1:2056753/101‑1 (MQ=255)
gTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cgg > 2:2293830/1‑101 (MQ=255)
tttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cggg < 2:3511691/101‑2 (MQ=255)
tttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cggg > 2:1399159/1‑100 (MQ=255)
ttATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cgggc < 1:2575501/101‑3 (MQ=255)
tatataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..g > 2:2310360/1‑101 (MQ=255)
tatataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cgggcc > 1:1375446/1‑98 (MQ=255)
tatataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cgggag > 2:4159158/1‑98 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGCGGC.Cc...gggc..gg > 2:4490965/1‑101 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.ccccggcgg > 1:2424495/1‑94 (MQ=255)
atataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.Cc...cggg..ggg > 2:1567708/1‑101 (MQ=255)
tataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGGGGGGCCGCGGC.GA.ccccggccgg > 2:3776304/1‑93 (MQ=255)
tataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGGCGCGGG.GAGCc...ggggcgg > 2:1063263/1‑97 (MQ=255)
ataGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggg < 1:3930975/101‑2 (MQ=255)
taGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGGGGG.GA.Cc...cggg..gggggg > 2:2893054/1‑101 (MQ=255)
aGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGGCGCGGC.GG.CC...CGG...GGGCgg..g..g > 1:4382640/1‑101 (MQ=255)
gggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggggct < 2:1819975/101‑5 (MQ=255)
ggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GG.CC...CCCC..GGGGgg..g..gg > 1:1904076/1‑100 (MQ=255)
ggTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggggctc < 1:3803435/101‑6 (MQ=255)
gTATCGGGGGGAGGGGTAAAGGCCGGCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggggctcc < 1:1072471/101‑7 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGG.NA.Cc...cggg..ggnngnnnnn > 2:2127742/1‑96 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggggctcc < 2:597974/101‑7 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGG..CGGCgg..g..gg > 1:2230135/1‑100 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGC..GCGGgg..g..gg > 2:3702518/1‑100 (MQ=255)
gTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.CC...CGCC..GCGCcg..g..gtc > 2:4882319/1‑99 (MQ=255)
tATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggggctccg < 2:28758/101‑8 (MQ=39)
aTCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GG.CC...CGGG..GCGGGG..G..Gcccc > 1:1329482/1‑101 (MQ=255)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCA.GGGCGG..G..Gcccc > 2:1286185/1‑101 (MQ=255)
cGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGC..GGGGGC..G..Gcgccc > 2:616588/1‑101 (MQ=255)
ggggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGGGGC.CA.CC...CGGG..GGGGgg..g..ggggcccc > 1:1680076/1‑94 (MQ=255)
gggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCc...gggc..gggggg..gcgcgcccc > 2:3999604/1‑93 (MQ=255)
gggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGC..GGGGGG..G..Ggccgccc > 1:4114447/1‑97 (MQ=255)
ggggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGC..CGGGGG..G..Gcgcccccc > 2:1606560/1‑98 (MQ=255)
gggAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGC..GGGGGG..T..Cccccccccc > 2:744264/1‑97 (MQ=255)
gagaGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGG..GGGGGG..G..GGCCGCCCAccc > 2:4377324/1‑101 (MQ=255)
agagGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.CC...CGGG..GGGGGG..G..GGCCCCCCCccccc > 1:2287093/1‑101 (MQ=255)
gTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCg < 1:2128023/101‑1 (MQ=25)
tAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGG..CGGGGG..G..GCGGCCGCCccccccccc > 1:1389059/1‑97 (MQ=255)
tAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCgg < 2:3261251/101‑1 (MQ=25)
tAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCgg < 2:1307984/101‑1 (MQ=25)
aaaGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGc < 2:1701662/101‑1 (MQ=25)
ccgatctCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGt < 1:3391033/95‑1 (MQ=21)
aGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCCCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGt < 2:1388472/101‑1 (MQ=25)
aGGCCGTCGGTGCGGGGCGGAAAGCCGCGTCCCAAGCAGGGTTTCGGCGCGGCGGGGCCGCGGC.GACCC...GGGCCGGGGCTC..C..GCCCCCGCACCCCCGGCGt < 2:4172312/101‑1 (MQ=25)
ggCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTa < 1:1317713/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.t < 2:4494322/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.t < 1:3702860/101‑1 (MQ=25)
gCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.t < 2:4382323/101‑1 (MQ=25)
ccGGCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.tt < 2:2110618/101‑1 (MQ=21)
cGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.ttt < 2:2340733/101‑1 (MQ=25)
gTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTg < 2:1488043/101‑1 (MQ=21)
tGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCa < 2:525119/101‑1 (MQ=21)
tGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCa < 1:4094346/101‑1 (MQ=21)
cGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCaag < 1:1766103/101‑1 (MQ=21)
ggggCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCaaga < 1:2498349/101‑1 (MQ=21)
ggggCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCaaga < 2:2583877/101‑1 (MQ=21)
ggCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCGCCCCCGGCGTA.TTTGCGCCaagaag < 1:3395357/101‑1 (MQ=18)
ggCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCaagaag < 2:1643264/101‑1 (MQ=18)
ggCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCaagaag < 1:3776589/101‑1 (MQ=18)
ggCGGAAAGCCGCGTGCCAAGCAGGGTTGCGCCACGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCaagaag < 1:4377641/101‑1 (MQ=18)
gCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAagaaga < 2:4739715/101‑1 (MQ=18)
cGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAgaagaa < 2:3221040/101‑1 (MQ=18)
ggAAAGCCGCGTGCAAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCGCGGCGTA.TTTGCGCCAAGAAGaaa < 2:2504440/101‑1 (MQ=18)
aaaGCCGCGTGCGAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACa < 1:4375377/101‑1 (MQ=18)
aaGCGGCGTGCCAGGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACaa < 1:3447389/101‑1 (MQ=17)
aaGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGC..GGGGGG..GCCGCGCCCGCACCCCCCGCGCA.TTTTTGACAAGAAGAAAAaa > 2:3089241/1‑101 (MQ=255)
gCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGc < 2:4592591/101‑1 (MQ=18)
gCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGc < 1:4920762/101‑1 (MQ=18)
gcgTGGCAAGCAGGGTTTCGCGGGGGCGGGGCGGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCggg < 1:1029493/101‑1 (MQ=17)
gcgTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCTGCGTA.TTTGCGCCAAGAAGAAACAAGCggg < 1:4491285/101‑1 (MQ=18)
gggCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGAc < 2:83904/99‑1 (MQ=18)
gTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.CCCGGGGGC..GGGGGG..G..CCCCCCCCACCCCCCGCGCATTTTTCGCC.AGAAAAAACaaaagggga > 2:2322397/1‑94 (MQ=255)
tGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGAcc < 1:3831048/101‑1 (MQ=18)
tGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGAcc < 1:65293/101‑1 (MQ=18)
tGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGAcc < 2:3229039/101‑1 (MQ=18)
gCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCa < 2:4697739/101‑1 (MQ=18)
ccAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAg < 2:1042902/101‑1 (MQ=18)
ccAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAg < 2:4924579/101‑1 (MQ=18)
cAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAgg < 2:4750756/101‑1 (MQ=18)
aGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGcc < 1:1477665/101‑1 (MQ=18)
cAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccc < 2:2592945/101‑1 (MQ=18)
cAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccc < 2:3097491/101‑1 (MQ=18)
cAGGGTTTCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGcccc < 1:1411749/101‑1 (MQ=18)
ttCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCa < 1:75397/101‑1 (MQ=18)
tCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAg < 1:114457/101‑1 (MQ=18)
tCGCCGCGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAg < 1:1762962/101‑1 (MQ=18)
cgccgcGGCGGGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGc < 1:257664/101‑1 (MQ=18)
cggcggGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCAt < 2:462330/101‑1 (MQ=18)
ggggggCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGc < 1:4261380/99‑1 (MQ=18)
gcggGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGc < 1:1327336/101‑1 (MQ=18)
gcggGGCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGc < 2:254259/101‑1 (MQ=18)
ggCCGCGGC.GACCC...GGGC..GGGGGGTCC..CCCCCCCCCCCCCCCGCGGA.TTTTCGCCCAGAAGAAAACAACGGGACCAGGCCCCCCCGCAGCCCCACGCCCTc > 2:871571/1‑101 (MQ=255)
gCCGCGGC.GACCC...GGGCGGGGGCTC..C..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTcc < 2:2286929/101‑1 (MQ=18)
|
TAGAGTTTATATAGGGTATCGGGGGGAGAGGTAAAGGCCGTCGGTGCGGGGCGGAAAGCCGCGTGCCAAGCAGGGTTTCGCCGCGGCGGGGCCGCGGC.GA.CC...GGGC..GGGCGG..G..GCCCCCGCACCCCCGGCGTA.TTTGCGCCAAGAAGAAACAAGCGGGACCAGGCCCCCCTGCAGCCGCATGCCGTCC > NC_014034/1732597‑1732784
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|