| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,185,930 | +C | 84.5% | intergenic (+203/‑302) | mtlK → / → RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,185,930 | 1 | .→C | 84.5% | 30.1 ‑0.3 ‑1.5 | 71 | intergenic (+203/‑302) | mtlK/RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
| Reads supporting (aligned to +/- strand): new base (24/36): ref base (5/6): total (29/42) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.50e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.28e-02 | ||||||||||
GCGGGGGCTCCG.CCCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..CCCGCCGGGTCTCCTCCGGGAGCAAGGCCGAGGCGAGACACCCCAGCGC > NC_014034/2185830‑2186024
|
gCGGGGGCTCCGCCCCCGCACCCCCC.GCGTATTTATCCCAAGAAAAAGCAGCAGCTTGACCCCCAAGCCCTG.TTTTGCTGGCACAAAGAAAGCGGAA.ACG.c > 2:3049471/1‑101 (MQ=9)
gCGGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.c < 2:618519/101‑1 (MQ=37)
cGGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc > 2:3062775/1‑101 (MQ=37)
cGGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCCAA.CCG.cc > 2:2986263/1‑101 (MQ=25)
gggggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc.c < 2:4044468/101‑1 (MQ=37)
ggggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCCAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc.c.c > 2:1962068/1‑101 (MQ=25)
ggggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc.c.c < 1:626703/101‑1 (MQ=37)
ggggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAA.CCG.cc.c.c > 2:1354543/1‑101 (MQ=37)
gggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc.c.cc < 2:393602/101‑2 (MQ=37)
gggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc.c.cc < 2:1677436/101‑2 (MQ=37)
ggcgccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.cc.c.cct < 1:183810/93‑3 (MQ=37)
ggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAA.CCG.cc.c.cct > 2:2714577/1‑99 (MQ=37)
gCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Cctt > 2:1619715/1‑101 (MQ=37)
gCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Cctt < 1:4525240/101‑1 (MQ=37)
gCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Cctt < 1:1364705/101‑1 (MQ=37)
gCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Cctt < 2:4530431/101‑1 (MQ=37)
cTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Ccttt > 2:3924689/1‑100 (MQ=37)
cTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Ccttt < 2:4879063/101‑2 (MQ=37)
cTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Ccttt < 1:3259981/101‑2 (MQ=37)
tccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.Cctttc > 1:4713053/6‑99 (MQ=37)
cgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCAc < 2:1283000/98‑1 (MQ=38)
cgcccccgcgcccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCAc < 2:511729/91‑1 (MQ=38)
ccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCtt < 2:1166255/101‑1 (MQ=38)
cccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTg < 1:3678633/101‑1 (MQ=38)
ccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTgg > 2:3748391/1‑101 (MQ=255)
cgcacccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGc > 2:139197/5‑101 (MQ=38)
cgcacccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CCTC.CTTTCACCTTGGc < 1:3822830/97‑1 (MQ=38)
gcacccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCt > 2:860631/4‑101 (MQ=255)
gcacccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCt < 1:2182846/98‑1 (MQ=38)
cacccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTc < 1:2051419/99‑1 (MQ=39)
acccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCa < 1:1962212/100‑1 (MQ=39)
acccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCa < 2:2966091/100‑1 (MQ=39)
cccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCaa < 1:1756297/101‑1 (MQ=255)
cccccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCaa < 2:774854/101‑1 (MQ=255)
cccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAat < 1:139213/101‑1 (MQ=255)
cccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAat < 2:1447549/101‑1 (MQ=255)
ccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAata < 1:4899841/101‑1 (MQ=255)
ccGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAata < 2:3919128/101‑1 (MQ=255)
cGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATccc < 2:1029025/101‑1 (MQ=255)
gTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCg < 1:2093180/101‑1 (MQ=255)
gTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTAATGGCCCAAGAAACGCGGAA.CCGCCC.C.CTTTCACCTTGGCGCAACTCTCCCg < 2:3341899/101‑1 (MQ=255)
tATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCCC.CC.C.CTTTCACCTTGGCTCAAATATCCCgg > 1:2035846/1‑101 (MQ=255)
tATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCgg > 2:2344725/1‑101 (MQ=255)
aTTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCggg > 1:2288343/1‑101 (MQ=255)
tttATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCgggg < 2:2164473/101‑1 (MQ=255)
tttATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCgggg > 1:218562/1‑101 (MQ=255)
tttATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCgggg > 1:4195748/1‑101 (MQ=255)
ttATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCggggg < 2:2190232/101‑1 (MQ=255)
ttATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCggggg > 1:2563483/1‑101 (MQ=255)
tATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGt > 2:4036391/1‑101 (MQ=255)
tATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGt > 1:1261360/1‑101 (MQ=255)
aTCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTc < 2:1660950/101‑1 (MQ=255)
cccAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAAGCGG.CC.C.CTTGCACCTTCGCTCAAATATCCCGGGGGTCCg > 2:849986/1‑101 (MQ=255)
ccAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCgg < 1:2447015/101‑1 (MQ=255)
aGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCggggg > 1:254682/1‑101 (MQ=255)
gAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGGTGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGc > 2:1589750/1‑101 (MQ=38)
gAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGc < 2:2341415/101‑1 (MQ=255)
gAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGc < 2:3005628/101‑1 (MQ=255)
aaaaaGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCg < 1:2129171/101‑1 (MQ=255)
aaaaGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCgg > 2:360495/1‑101 (MQ=255)
aaaaGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCgg < 2:90817/101‑1 (MQ=255)
aaaaGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAAGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGGCCGGGGGCgg > 1:2290097/1‑101 (MQ=38)
aaaGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGa > 2:474331/1‑101 (MQ=255)
aaGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAg < 1:3063013/101‑1 (MQ=255)
agcagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..c > 2:1374580/1‑101 (MQ=255)
gcagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAggc > 2:3471801/1‑99 (MQ=38)
gcagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cc < 2:2288179/101‑1 (MQ=255)
gcagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cc < 1:3049709/101‑1 (MQ=255)
gcagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cc < 2:419578/101‑1 (MQ=255)
gcagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cc < 1:3748669/101‑1 (MQ=255)
cagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..ccc > 1:1976428/1‑101 (MQ=255)
cagcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCG.CC.CGCTTTCACCTTGGCTCAAAGATCCCGGGGGTCCGGGGGCGGAG..ccc > 1:4243165/1‑101 (MQ=37)
agcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cccc < 1:2196920/101‑2 (MQ=37)
agcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cccc < 1:860733/101‑2 (MQ=37)
agcGGCTTGCCCCGAAGGACTTG.TTTTAATGGCACAGGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGAGGAG..cccc < 2:4150550/101‑2 (MQ=25)
gcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCGAATATCCCGGGGGTCCGGGGGCGGAG..ccccc < 1:4534055/101‑3 (MQ=37)
gcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..ccccc < 1:2344889/101‑3 (MQ=37)
gcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..ccccc < 2:2714406/101‑3 (MQ=37)
gcGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGGCCGGGGGCGGAG..ccccc > 2:375640/1‑99 (MQ=37)
ttGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cccccggcgg > 1:1118530/1‑94 (MQ=25)
gCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cccccggcgggg > 2:2166333/1‑92 (MQ=21)
gCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cccccggcgggg > 2:3480721/1‑92 (MQ=21)
ccccGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..cccccggcgggcg > 2:576145/1‑91 (MQ=21)
aCGCCGAC.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGGCA..AAGCCCGAGGCGAAACAcccc < 2:4712730/101‑1 (MQ=2)
gAA.CCGCCC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGGCGCCGCCGGG.G.AAGGCCGAGGCGGAAAAcccccccgc > 1:638168/1‑96 (MQ=2)
|
GCGGGGGCTCCG.CCCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAA.CCG.CC.C.CTTTCACCTTGGCTCAAATATCCCGGGGGTCCGGGGGCGGAG..CCCGCCGGGTCTCCTCCGGGAGCAAGGCCGAGGCGAGACACCCCAGCGC > NC_014034/2185830‑2186024
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|