| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,367 | +T | 2.6% | intergenic (‑163/‑142) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,367 | 1 | .→T | 2.6% | 15.7 ‑0.4 ‑0.2 | 233 | intergenic (‑163/‑142) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/2): ref base (125/102): total (129/104) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.94e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.64e-01 | ||||||||||
Only 100 of 266 total aligned reads displayed.
GAAGGGGGCTCTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATA > NC_014034/2249268‑2249466
|
aagGCGGCTCGGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t < 2:673696/101‑1 (MQ=38)
ggCTCTGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGgcgc > 1:1234036/1‑101 (MQ=255)
ctctGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 1:4295982/101‑1 (MQ=255)
tctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gc < 2:2262889/96‑1 (MQ=255)
ctG.CCCTCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 2:2212381/101‑1 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 1:1942502/99‑1 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGAAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATACCGGGGGGGGAA.GGGCGCA..GCCag > 1:2491384/3‑101 (MQ=38)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:231295/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAACATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:579604/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGTTATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:3670845/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:3213276/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg > 2:4829050/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:392326/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:2415653/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:2111314/101‑1 (MQ=255)
ccgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAAC.CGGA..TGCATTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggg > 1:4872835/9‑101 (MQ=21)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg > 1:396248/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3498506/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3312132/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgc > 1:4454983/1‑101 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc > 2:1143867/6‑101 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:902873/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg.c > 2:2661997/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc < 1:2591059/101‑1 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc > 1:1052733/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.c > 1:929201/1‑101 (MQ=255)
cggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgcg < 1:276066/100‑1 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgcg.c < 2:3846146/101‑1 (MQ=17)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAGCG.cc < 1:4232038/96‑1 (MQ=17)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.ccc < 1:2807368/101‑2 (MQ=255)
aCT.CCCCAGGGTTATTTGAGGCAAGATGTA...GGGG..GGC.TTTCATCTTGGCGAAAATTTGCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.ccct < 2:4101922/101‑3 (MQ=25)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttc < 1:2181228/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttc < 2:1306701/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttc > 1:4658426/1‑97 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttcg < 1:2330065/101‑6 (MQ=255)
ccccGGGATATTTGCGGCAAGGTGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC..tg > 1:2863925/1‑100 (MQ=2)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC..tgc < 2:1204802/101‑3 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC..tgccc > 2:3195667/1‑97 (MQ=2)
gggATATTTGCGGCAAGATGAA...GGGGCATGA.TTGCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC..tgcccc < 1:4326169/101‑6 (MQ=0)
gggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCgcgggc < 1:654632/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCgcgggc > 1:568043/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCgcggggg > 1:3003233/1‑99 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGAAGCGCCCC.CC..TTCCGGggcggc > 1:1142867/1‑101 (MQ=25)
atatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGggcggc > 1:2251467/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGcc < 2:2757136/101‑1 (MQ=255)
atTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC..tgccccgccgg > 2:4122224/1‑91 (MQ=2)
ttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCcgcg > 2:508930/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGGGGGCGGCCGCGa > 1:477324/1‑101 (MQ=37)
gAGGAAAGATGAA...GGGG..GGC.TTTCATTTTGCCGAAAATTTCGGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGAc < 2:1789784/101‑1 (MQ=37)
aggtaggaggAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGAcg < 2:1582857/92‑1 (MQ=25)
cAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGAcgcgc < 2:341805/101‑1 (MQ=255)
cAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCACC..TTCGCGGGCGGCCGCGAcgcgc > 2:1280495/1‑101 (MQ=255)
aaGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGAcgcgcg > 2:3936860/1‑101 (MQ=255)
gagga...GGGG..GGC.TTTCATTTTGGCAAAAATGCCCCGGGGGGGTAA.TGGGGGC..GCCCGGGGGGGGGCGCC.CCC.CCCTTTCGCGGGCGGCCGCGACGCGcgcc < 2:4236344/97‑1 (MQ=255)
tGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGcgccgc > 2:1777897/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:3437886/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:531857/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGGCGCGCGCCGCaa > 2:1923001/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCGGCaa > 1:2565231/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:249070/1‑101 (MQ=255)
gggg..ggC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:349745/101‑1 (MQ=255)
gggg..ggC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:3529936/1‑101 (MQ=255)
gggg..ggC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:365365/101‑1 (MQ=255)
gC.TTTCATCATGCCGAAAATATCCCGGGGGGTGAA.TGGCCCA..GCCAGGGGGGGGAAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGCCg > 2:1677257/1‑101 (MQ=37)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:3109615/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGCTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:398831/1‑101 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc < 2:4382807/101‑1 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:5009555/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:2075832/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:1030871/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 1:3892216/101‑1 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 2:2699450/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4349614/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:2997216/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:4573046/101‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 1:2150742/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 1:1794654/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:3784659/1‑101 (MQ=255)
aaaaGATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt < 2:4846047/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:308107/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTCTGTCATTc > 2:3328181/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GACAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:2399495/101‑1 (MQ=255)
aaTGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCACCGCCCC.CC..TTCGCTGCCGACCGCGACGCGCGCCCCACCTGGTCGTGCCCCTATGTCATTCt > 2:1642620/1‑101 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:747293/101‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:2879455/1‑101 (MQ=255)
atCCCGGGGGATGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:432316/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:3737446/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 2:2439222/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 1:4840623/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:702558/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:1458945/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTGGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:1550806/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:2503832/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:4000052/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:2122268/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGACCCTTTGTCATTCTGTCGCACCCATGTCa > 2:824026/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGGGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:4564322/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 1:4281771/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 1:4922593/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 2:2324904/1‑101 (MQ=255)
|
GAAGGGGGCTCTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATA > NC_014034/2249268‑2249466
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|