Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,486,442 +C 4.1% intergenic (‑70/+124) RCAP_rcc02312 ← / ← soxG hypothetical protein/sarcosine oxidase subunit gamma

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,486,4420.→C 4.1% 24.7 ‑0.7 ‑0.0267intergenic (‑70/+124)RCAP_rcc02312/soxGhypothetical protein/sarcosine oxidase subunit gamma
Reads supporting (aligned to +/- strand):  new base (3/7):  ref base (114/142):  total (117/150)
Fisher's exact test strand distribution p-value = 5.20e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.09e-01

Only 100 of 285 total aligned reads displayed.

GCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AA.GG.GGCGCTGCCCCTCTCTTG.CCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGCAG  >  NC_014034/2486347‑2486538
                                                                                                                                                                                                    
gcgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCtt                                                                                              <  1:2481732/101‑1 (MQ=255)
  gcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.c                                                                                           <  1:2056091/101‑1 (MQ=255)
   cccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.cc                                                                                          >  2:2258041/1‑101 (MQ=255)
    ccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.ccc                                                                                         >  1:2107533/1‑100 (MQ=255)
        ggATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.ccctgcc                                                                                     <  1:4251394/101‑6 (MQ=255)
         gATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCg                                                                                     >  2:2595374/1‑101 (MQ=255)
          aTTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCgg                                                                                    >  2:3076336/1‑101 (MQ=255)
           tttAGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCggg                                                                                   >  2:3158235/1‑101 (MQ=255)
            ttCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGc                                                                                  >  1:1664396/1‑101 (MQ=38)
              cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAAGAG.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa                                                                                >  1:3290996/1‑101 (MQ=38)
              cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa                                                                                >  2:2162454/1‑101 (MQ=38)
              cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa                                                                                <  1:4450567/101‑1 (MQ=38)
              cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa                                                                                <  2:3679921/101‑1 (MQ=38)
                aaTAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGt                                                                              <  2:3316286/101‑1 (MQ=38)
                   aGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAc                                                                           <  2:3108959/101‑1 (MQ=38)
                   aGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAc                                                                           >  1:2803745/1‑101 (MQ=38)
                      ccATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAcccc                                                                        >  2:1461377/1‑101 (MQ=37)
                       cATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAccccc                                                                       <  2:781860/101‑1 (MQ=37)
                         tGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCgg                                                                     <  2:1557562/101‑1 (MQ=37)
                         tGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CCCTTGCCCCGCCGGGCAAGGCAccccccg                                                                     >  1:987204/1‑99 (MQ=37)
                          gCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCcgg                                                                    >  1:3712226/1‑101 (MQ=25)
                           cTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGa                                                                   <  2:1403402/101‑1 (MQ=37)
                            tgagccttcTTTGCCTCGGATCTGCGGCAAGCCCGGACGAAAGGCAAGCGAA.AAGGG.GGCCCTGACCC.CTCTTGCCCTGCCGGGCAAGTCCCCCCCGGGat                                                                  <  2:2825977/93‑1 (MQ=255)
                            tGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGat                                                                  <  2:3478437/101‑1 (MQ=37)
                             ggATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGgta                                                                 >  1:3621855/1‑101 (MQ=37)
                              gATCTCTTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGatat                                                                <  1:4151881/101‑1 (MQ=25)
                              gATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGatat                                                                <  1:4882823/101‑1 (MQ=37)
                               aTCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATAtt                                                               <  1:3059146/101‑1 (MQ=37)
                               aTCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATAtt                                                               <  1:3895965/101‑1 (MQ=37)
                                 ctcCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATAttaa                                                             >  1:613111/1‑99 (MQ=25)
                                   ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg                                                           >  1:4955045/1‑101 (MQ=37)
                                   ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg                                                           <  2:276686/101‑1 (MQ=37)
                                   ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg                                                           >  1:2933134/1‑101 (MQ=37)
                                     tttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGc                                                         <  2:4074172/101‑1 (MQ=37)
                                     tttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGc                                                         <  1:1305611/101‑1 (MQ=37)
                                      ttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCa                                                        <  2:1296069/101‑1 (MQ=37)
                                      ttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCa                                                        >  1:4742603/1‑101 (MQ=37)
                                      ttGCCTGCGATCTGTGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTGGCCCTGCCGGGCAAGTCACCCCCGCGATATTCATGGCa                                                        <  2:2117610/101‑1 (MQ=25)
                                       tGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCaa                                                       >  2:4866726/1‑101 (MQ=37)
                                        gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg                                                      <  1:2835193/101‑1 (MQ=37)
                                        gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg                                                      >  1:2355285/1‑101 (MQ=37)
                                        gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTCCCGGGCAACCCACCCCCGGGATATTCATGGAAAg                                                      <  2:163082/101‑1 (MQ=25)
                                         ccTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGa                                                     >  1:2243302/1‑101 (MQ=37)
                                          cTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGAt                                                    >  2:2450516/1‑101 (MQ=37)
                                          cTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGAt                                                    <  2:4127881/101‑1 (MQ=37)
                                           ttCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATg                                                   >  2:909084/1‑101 (MQ=37)
                                           ttCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATg                                                   <  1:3235244/101‑1 (MQ=37)
                                            tCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGa                                                  <  1:4083583/101‑1 (MQ=37)
                                             cGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGaa                                                 <  1:3796517/101‑1 (MQ=37)
                                              gATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAag                                                <  2:545787/101‑1 (MQ=37)
                                              gATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAag                                                <  2:2932907/101‑1 (MQ=37)
                                               aTCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagg                                               <  2:2872849/101‑1 (MQ=37)
                                               aTCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagg                                               <  1:2279429/101‑1 (MQ=37)
                                                tCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagga                                              <  2:3236182/101‑1 (MQ=37)
                                                  tGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAaggagg                                            >  2:152180/1‑101 (MQ=25)
                                                   gCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCTCCGGGATATTCATGGCAAGATGAAGGAGGc                                           <  1:4496267/101‑1 (MQ=37)
                                                    cGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCAGCCGGCCAAGTCACCCCCGGCATATTCATGGCAAGATGAAGGAGGCg                                          >  2:4992580/1‑101 (MQ=25)
                                                     ggCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGGGGCgt                                         >  1:555888/1‑101 (MQ=25)
                                                     ggCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCgt                                         <  1:172227/101‑1 (MQ=37)
                                                     ggCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATACTCATGGCAAGATGAAGGAGGCgt                                         >  1:3463929/1‑101 (MQ=25)
                                                       cAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGATCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCCCCCCCGGGATATTCATGGCAAGATGAAGGAGGCgtgt                                       <  2:4467691/101‑1 (MQ=25)
                                                        aaGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGtt                                      >  2:3580114/1‑101 (MQ=25)
                                                         aGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGttt                                     <  1:2564255/101‑1 (MQ=25)
                                                         aGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGttt                                     <  2:2353172/101‑1 (MQ=37)
                                                            ccGGCCGCAAGGCAAGCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCAt                                  <  2:3990068/101‑1 (MQ=25)
                                                            ccGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCAt                                  <  1:2687412/101‑1 (MQ=25)
                                                               gCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCCCCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCtt                               <  1:1535783/101‑1 (MQ=25)
                                                               gCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCtt                               >  1:759564/1‑101 (MQ=21)
                                                               gCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCtt                               <  2:3011666/101‑1 (MQ=25)
                                                                ccGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTg                              <  2:4954715/101‑1 (MQ=25)
                                                                 cGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGc                             <  1:3158486/101‑1 (MQ=25)
                                                                 cGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGc                             >  2:1794685/1‑101 (MQ=21)
                                                                 cGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGc                             <  2:3821068/101‑1 (MQ=25)
                                                                  gcaaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGcc                            >  1:1173862/1‑101 (MQ=21)
                                                                  gcaaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGcc                            >  1:144483/1‑101 (MQ=21)
                                                                   caaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCa                           <  2:1099480/101‑1 (MQ=25)
                                                                    aaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCAt                          <  2:66437/101‑1 (MQ=25)
                                                                    aaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCAt                          >  1:899885/1‑101 (MQ=21)
                                                                      ggcaagCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATaa                        <  2:4818141/101‑1 (MQ=21)
                                                                       gcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATaaa                       <  2:3861009/101‑1 (MQ=25)
                                                                        caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat                      <  1:3349895/101‑1 (MQ=21)
                                                                        caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat                      <  1:4867053/101‑1 (MQ=25)
                                                                        caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat                      >  1:4636069/1‑101 (MQ=21)
                                                                        caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat                      >  2:4333107/1‑101 (MQ=21)
                                                                        caagCGAA.AA.GGCGGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat                      <  1:1628404/101‑1 (MQ=21)
                                                                          agCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAatat                    <  1:1911080/101‑1 (MQ=21)
                                                                           gCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATc                   <  2:2570612/101‑1 (MQ=21)
                                                                           cgaaa.ag.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATcc                  <  2:3362052/98‑1 (MQ=21)
                                                                            gaaa.ag.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATccc                 <  1:2020499/99‑1 (MQ=18)
                                                                             aaa.ag.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCg                <  1:4697495/100‑1 (MQ=21)
                                                                                 aaggg.ggCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCggg              >  1:3996374/4‑101 (MQ=18)
                                                                                    gg.ggCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCgggggg           <  2:826222/101‑1 (MQ=255)
                                                                                     g.ggCGCTTCCCC.CTCTTGACCTGCCGGGCAAGTCACCCCCGTTATATTTATGTCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGa          <  1:5029364/101‑1 (MQ=18)
                                                                                          gcTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTcc      <  1:2162602/101‑1 (MQ=255)
                                                                                          cgcggcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTc       <  2:4632358/96‑1 (MQ=21)
                                                                                           cTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCg     >  1:1583805/1‑101 (MQ=255)
                                                                                             tgcccCCTCTTGCCCTGCCGGGCAAGTCACCCCGCGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGc    <  1:4333424/99‑1 (MQ=21)
                                                                                             tgcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGc    <  2:2043506/99‑1 (MQ=255)
                                                                                             tgcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGACAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGc    <  2:3927542/99‑1 (MQ=21)
                                                                                              gcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGCa   >  2:2521839/2‑101 (MQ=255)
                                                                                                                                                                                                    
GCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AA.GG.GGCGCTGCCCCTCTCTTG.CCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGCAG  >  NC_014034/2486347‑2486538

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 28 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG