Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,486,442 | +C | 4.1% | intergenic (‑70/+124) | RCAP_rcc02312 ← / ← soxG | hypothetical protein/sarcosine oxidase subunit gamma |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,486,442 | 0 | .→C | 4.1% | 24.7 ‑0.7 ‑0.0 | 267 | intergenic (‑70/+124) | RCAP_rcc02312/soxG | hypothetical protein/sarcosine oxidase subunit gamma |
Reads supporting (aligned to +/- strand): new base (3/7): ref base (114/142): total (117/150) | ||||||||||
Fisher's exact test strand distribution p-value = 5.20e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.09e-01 |
Only 100 of 285 total aligned reads displayed.
GCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AA.GG.GGCGCTGCCCCTCTCTTG.CCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGCAG > NC_014034/2486347‑2486538
gcgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCtt < 1:2481732/101‑1 (MQ=255)
gcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.c < 1:2056091/101‑1 (MQ=255)
cccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.cc > 2:2258041/1‑101 (MQ=255)
ccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.ccc > 1:2107533/1‑100 (MQ=255)
ggATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTtg.ccctgcc < 1:4251394/101‑6 (MQ=255)
gATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCg > 2:2595374/1‑101 (MQ=255)
aTTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCgg > 2:3076336/1‑101 (MQ=255)
tttAGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCggg > 2:3158235/1‑101 (MQ=255)
ttCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGc > 1:1664396/1‑101 (MQ=38)
cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAAGAG.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa > 1:3290996/1‑101 (MQ=38)
cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa > 2:2162454/1‑101 (MQ=38)
cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa < 1:4450567/101‑1 (MQ=38)
cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCaa < 2:3679921/101‑1 (MQ=38)
aaTAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGt < 2:3316286/101‑1 (MQ=38)
aGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAc < 2:3108959/101‑1 (MQ=38)
aGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAc > 1:2803745/1‑101 (MQ=38)
ccATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAcccc > 2:1461377/1‑101 (MQ=37)
cATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCAccccc < 2:781860/101‑1 (MQ=37)
tGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCgg < 2:1557562/101‑1 (MQ=37)
tGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CCCTTGCCCCGCCGGGCAAGGCAccccccg > 1:987204/1‑99 (MQ=37)
gCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCcgg > 1:3712226/1‑101 (MQ=25)
cTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGa < 2:1403402/101‑1 (MQ=37)
tgagccttcTTTGCCTCGGATCTGCGGCAAGCCCGGACGAAAGGCAAGCGAA.AAGGG.GGCCCTGACCC.CTCTTGCCCTGCCGGGCAAGTCCCCCCCGGGat < 2:2825977/93‑1 (MQ=255)
tGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGat < 2:3478437/101‑1 (MQ=37)
ggATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGgta > 1:3621855/1‑101 (MQ=37)
gATCTCTTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGatat < 1:4151881/101‑1 (MQ=25)
gATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGatat < 1:4882823/101‑1 (MQ=37)
aTCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATAtt < 1:3059146/101‑1 (MQ=37)
aTCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATAtt < 1:3895965/101‑1 (MQ=37)
ctcCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATAttaa > 1:613111/1‑99 (MQ=25)
ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg > 1:4955045/1‑101 (MQ=37)
ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg < 2:276686/101‑1 (MQ=37)
ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg > 1:2933134/1‑101 (MQ=37)
tttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGc < 2:4074172/101‑1 (MQ=37)
tttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGc < 1:1305611/101‑1 (MQ=37)
ttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCa < 2:1296069/101‑1 (MQ=37)
ttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCa > 1:4742603/1‑101 (MQ=37)
ttGCCTGCGATCTGTGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTGGCCCTGCCGGGCAAGTCACCCCCGCGATATTCATGGCa < 2:2117610/101‑1 (MQ=25)
tGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCaa > 2:4866726/1‑101 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg < 1:2835193/101‑1 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg > 1:2355285/1‑101 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTCCCGGGCAACCCACCCCCGGGATATTCATGGAAAg < 2:163082/101‑1 (MQ=25)
ccTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGa > 1:2243302/1‑101 (MQ=37)
cTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGAt > 2:2450516/1‑101 (MQ=37)
cTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGAt < 2:4127881/101‑1 (MQ=37)
ttCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATg > 2:909084/1‑101 (MQ=37)
ttCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATg < 1:3235244/101‑1 (MQ=37)
tCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGa < 1:4083583/101‑1 (MQ=37)
cGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGaa < 1:3796517/101‑1 (MQ=37)
gATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAag < 2:545787/101‑1 (MQ=37)
gATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAag < 2:2932907/101‑1 (MQ=37)
aTCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagg < 2:2872849/101‑1 (MQ=37)
aTCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagg < 1:2279429/101‑1 (MQ=37)
tCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagga < 2:3236182/101‑1 (MQ=37)
tGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAaggagg > 2:152180/1‑101 (MQ=25)
gCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCTCCGGGATATTCATGGCAAGATGAAGGAGGc < 1:4496267/101‑1 (MQ=37)
cGGCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCAGCCGGCCAAGTCACCCCCGGCATATTCATGGCAAGATGAAGGAGGCg > 2:4992580/1‑101 (MQ=25)
ggCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGGGGCgt > 1:555888/1‑101 (MQ=25)
ggCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCgt < 1:172227/101‑1 (MQ=37)
ggCAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATACTCATGGCAAGATGAAGGAGGCgt > 1:3463929/1‑101 (MQ=25)
cAAGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGATCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCCCCCCCGGGATATTCATGGCAAGATGAAGGAGGCgtgt < 2:4467691/101‑1 (MQ=25)
aaGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGtt > 2:3580114/1‑101 (MQ=25)
aGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGttt < 1:2564255/101‑1 (MQ=25)
aGCCCGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGttt < 2:2353172/101‑1 (MQ=37)
ccGGCCGCAAGGCAAGCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCAt < 2:3990068/101‑1 (MQ=25)
ccGGCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCAt < 1:2687412/101‑1 (MQ=25)
gCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCCCCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCtt < 1:1535783/101‑1 (MQ=25)
gCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCtt > 1:759564/1‑101 (MQ=21)
gCCGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCtt < 2:3011666/101‑1 (MQ=25)
ccGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTg < 2:4954715/101‑1 (MQ=25)
cGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGc < 1:3158486/101‑1 (MQ=25)
cGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGc > 2:1794685/1‑101 (MQ=21)
cGCAAGGCAAGCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGc < 2:3821068/101‑1 (MQ=25)
gcaaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGcc > 1:1173862/1‑101 (MQ=21)
gcaaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGcc > 1:144483/1‑101 (MQ=21)
caaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCa < 2:1099480/101‑1 (MQ=25)
aaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCAt < 2:66437/101‑1 (MQ=25)
aaggcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCAt > 1:899885/1‑101 (MQ=21)
ggcaagCGAA.AAGGG.GGCTCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATaa < 2:4818141/101‑1 (MQ=21)
gcaagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATaaa < 2:3861009/101‑1 (MQ=25)
caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat < 1:3349895/101‑1 (MQ=21)
caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat < 1:4867053/101‑1 (MQ=25)
caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat > 1:4636069/1‑101 (MQ=21)
caagCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat > 2:4333107/1‑101 (MQ=21)
caagCGAA.AA.GGCGGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat < 1:1628404/101‑1 (MQ=21)
agCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAatat < 1:1911080/101‑1 (MQ=21)
gCGAA.AAGGG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATc < 2:2570612/101‑1 (MQ=21)
cgaaa.ag.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATcc < 2:3362052/98‑1 (MQ=21)
gaaa.ag.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATccc < 1:2020499/99‑1 (MQ=18)
aaa.ag.GG.GGCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCg < 1:4697495/100‑1 (MQ=21)
aaggg.ggCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCggg > 1:3996374/4‑101 (MQ=18)
gg.ggCGCTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCgggggg < 2:826222/101‑1 (MQ=255)
g.ggCGCTTCCCC.CTCTTGACCTGCCGGGCAAGTCACCCCCGTTATATTTATGTCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGa < 1:5029364/101‑1 (MQ=18)
gcTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTcc < 1:2162602/101‑1 (MQ=255)
cgcggcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTc < 2:4632358/96‑1 (MQ=21)
cTGCCCC.CTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCg > 1:1583805/1‑101 (MQ=255)
tgcccCCTCTTGCCCTGCCGGGCAAGTCACCCCGCGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGc < 1:4333424/99‑1 (MQ=21)
tgcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGc < 2:2043506/99‑1 (MQ=255)
tgcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGACAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGc < 2:3927542/99‑1 (MQ=21)
gcccCCTCTTGCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGCa > 2:2521839/2‑101 (MQ=255)
GCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGAA.AA.GG.GGCGCTGCCCCTCTCTTG.CCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGGGGGGAGTCCGCAG > NC_014034/2486347‑2486538
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 28 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|