| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,780,410 | +T | 2.4% | coding (980/1257 nt) | RCAP_rcc02591 ← | surface presentation of antigens protein family |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,780,410 | 1 | .→T | 2.4% | 8.9 ‑3.1 ‑0.4 | 168 | coding (980/1257 nt) | RCAP_rcc02591 | surface presentation of antigens protein family |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (74/90): total (78/90) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.45e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.42e-01 | ||||||||||
Only 100 of 194 total aligned reads displayed.
AGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACCGCGCG > NC_014034/2780311‑2780510
|
aGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.t > 1:2197119/1‑101 (MQ=255)
aCCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTg < 2:2081161/101‑1 (MQ=255)
ccgccgCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.tttg > 2:3591220/1‑99 (MQ=255)
ccgccgCCACTGCCGGGCAGCGGATCACAGGCCGGGGAAACCATCCTGTCGAGCGGCGCGCGCGGGCCGCTGGGCGCCGATTTCGCGGCGAACGCGC.TTgt > 2:4214056/1‑100 (MQ=255)
cgccgcCGCTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGc < 2:1554122/101‑1 (MQ=255)
cgccACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGcccc > 1:3823541/1‑101 (MQ=255)
gccACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGtcccc > 1:3405089/1‑100 (MQ=255)
gccACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGccccc > 1:64980/1‑100 (MQ=255)
cACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGcc < 1:1548868/101‑1 (MQ=255)
acggCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCt < 1:1122061/98‑1 (MQ=255)
aCTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCt < 2:1771509/101‑1 (MQ=255)
cTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTc < 2:2211859/101‑1 (MQ=255)
cTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTc < 2:5003144/101‑1 (MQ=255)
cTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTc < 1:20730/101‑1 (MQ=255)
ccGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCgca > 1:1070262/1‑99 (MQ=255)
cGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGTCCCCcccccgac > 2:1050399/1‑95 (MQ=255)
cGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAg < 1:222545/101‑1 (MQ=255)
cGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGCCGAGCGTCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAg < 2:2321106/101‑1 (MQ=255)
gggCAGCTGATTATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAgg < 2:354636/101‑1 (MQ=255)
gggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAgg > 1:1620053/1‑101 (MQ=255)
gggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCCcccccacgg > 2:3113467/1‑94 (MQ=255)
ggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGTCCCCcccccccggg > 1:2634246/1‑93 (MQ=255)
ggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAggg < 2:3305598/101‑1 (MQ=255)
ggCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAggg < 2:950881/101‑1 (MQ=255)
gCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGggc < 1:2576498/101‑1 (MQ=255)
cAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGTCCCGCCTCCAAGggcg > 2:1147992/1‑101 (MQ=255)
gATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCCCCCCTCAGggcgggggg > 2:3656501/1‑100 (MQ=255)
tCATAGGCGGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCac < 2:3466918/101‑1 (MQ=255)
tCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCGCCTCGACGggggggggggc > 1:2535498/1‑98 (MQ=255)
cATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGTCCCGCCGCCAAGggcggcgggggc > 2:4679077/1‑97 (MQ=255)
cATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCacg < 2:1738001/101‑1 (MQ=255)
aTAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCCGCCCGAAGGCGGGGGGCacgc > 2:1475312/1‑100 (MQ=255)
ggCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGAcgc < 1:453729/101‑1 (MQ=255)
ccGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGCTTTGGCCCCCCCCCCAGGGGGGGGGGC.CGACgcgg > 1:4184182/1‑101 (MQ=255)
gggAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCGAAGGGCGGGGGCACGACGGGgggc > 1:2175815/1‑101 (MQ=255)
ggAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCGCCCCCGAGGGGGGCGGGCCGACgcgggggc > 2:192787/1‑97 (MQ=255)
gAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCCCAAGGGGGGGGCGCGGCGCGgcgcgc > 2:2023023/1‑99 (MQ=255)
aTCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCCCCTCGCAGGGCGGCGGGCCGACGCGGCGCCccc > 2:69033/1‑100 (MQ=255)
aTCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCCCCCCCCAGGGCGGGGGCGCGACGCGGGGCGccc > 2:1187386/1‑100 (MQ=255)
aTCGATCCGGTCGAGCGCCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCt < 2:3249716/101‑1 (MQ=255)
tCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCCCAGGGGGGGGGGGCGGCGCGGCGCGcccc > 2:1852787/1‑99 (MQ=255)
gATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGCTTTGGCCCCCCCCCCAGGGGGGGGGGGCCG.CGCGGCGCACCctcg > 1:997196/1‑101 (MQ=255)
gATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCCCCttcg > 2:595088/1‑101 (MQ=255)
ccGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCttcggtt < 1:3717801/101‑1 (MQ=255)
ccGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCCCGCAGTGGGGCGGCACGGCGGGGCGCCACttctgtt > 1:2336568/1‑101 (MQ=255)
ggTCGAGCGGCGCGCGCGCCCCGCTGGGCGCCGATTCCCCGGCAGAGGGGC.TTGGCCCCGCCTCGAGGGGCGGCGGCACGACGCGGCGCCCCttcggttcg < 1:3827552/101‑1 (MQ=255)
ggcGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCttcggttcgg < 2:2709245/99‑1 (MQ=255)
gTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGAATTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCttcggttcgg < 1:4308371/101‑1 (MQ=255)
cGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGggc < 1:461498/101‑1 (MQ=255)
aGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCGACGGGCGGGGGCACGAAGCGGGGCACCCTCCGTTTGggggg > 1:1238866/1‑101 (MQ=255)
cgcgcccgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCa < 2:2510498/101‑1 (MQ=255)
cgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATc < 1:4407973/101‑1 (MQ=255)
cgcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATc < 2:778288/101‑1 (MQ=255)
gcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCa < 1:2508777/101‑1 (MQ=255)
gcgcgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCa < 2:4923070/101‑1 (MQ=255)
cgGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCCAAGGGCGGCGGCACGACGCGGCGCACCCTCGGGTCGGGGGGGGCCCTCAggt > 1:3049819/1‑99 (MQ=255)
ggCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCCCCCTCCGTTCGGGGGGGGGCATCAGccc > 2:3871227/1‑99 (MQ=255)
ggCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGctc < 1:1175485/101‑1 (MQ=255)
ggCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGctc < 1:4792313/101‑1 (MQ=255)
ggCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGctc < 1:3950441/101‑1 (MQ=255)
gCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGGCCCGCCCCCAAGGGCGGGGGCCCTGCGCGGCGGACCTTCGGTTCGGGGGGGGCCGCCAGcgct > 1:4205546/1‑101 (MQ=255)
gCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCGAAGGGCGGGGGGCCGACGCGGCGCACCTTCGGTTCGGGGGGGGCCCTcccccct > 1:3550705/1‑95 (MQ=255)
gCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGctct < 1:2769036/101‑1 (MQ=255)
gCCCGCGGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGctct < 1:175543/101‑1 (MQ=255)
gccGCTGGGCGCCGATTTGCCGGCAAGGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCtctt < 2:2892937/100‑1 (MQ=255)
ccGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCCTCGGTTCGGGGGGCGCCCTCCGCtcttt > 1:3639076/1‑100 (MQ=255)
cGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TCGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCtcttct < 1:2001377/101‑1 (MQ=255)
cTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCGAAGGGGGGCGGCACGACGCGGCGCGCCTTCGGGTCGGGGGGCGCCCCCACCTCttcttc > 1:2276056/1‑101 (MQ=255)
cTGGGCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCCAAGGGCGGCGGCACGACGCGGCGCACCCTCGGGTCTGGGGGCGCCCCCCGCGCttcttc > 2:267448/1‑101 (MQ=255)
cTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCCTCAGCTCttcttc > 2:2973241/1‑101 (MQ=255)
tGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGGGGCGGCACGACGCGGGGCACCTTAGGGTCGGGGGGCGCCCTCAGCTCTTCTTcc > 1:677961/1‑101 (MQ=255)
gggCGCCGATTTCCCGGCAAAGGGGC.TTTGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGGGCCACCAGCTcttttttcc > 2:2650507/1‑98 (MQ=255)
gggCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCt < 2:3019923/101‑1 (MQ=255)
ggCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTc > 1:4938468/1‑101 (MQ=255)
ggCGCCGATTTCCCGGCAAAGGGGC.TTGCCCCCGCCTCGAAGGGCGGCGGCACGTCGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTc < 2:873335/101‑1 (MQ=255)
ctccGATTTCCCGGCAGAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCgt < 2:4502595/99‑1 (MQ=255)
cGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGtt < 2:4452378/101‑1 (MQ=255)
cGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGtt < 2:4231242/101‑1 (MQ=255)
cGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGtt < 1:1306929/101‑1 (MQ=255)
gATTTCCCGGCAAAGGGGC.TTTGCCCCCCCCCGGAGGGGGGCGGCACGACGCGGCGCACCTTCGGGTCGGGGGGGGCCCACAGCTCTTCTTTCCCGTTTTc > 1:18915/1‑101 (MQ=255)
gATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTc < 1:4624447/101‑1 (MQ=255)
aTTTCCCGGCAAAGGGGC.TTTGCCCCGCCCCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGGTCCGGCGGCGCCCCCACCCCTTTTTCCTCGTGTTcc > 1:2192336/1‑100 (MQ=255)
aTTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCg < 2:1265461/101‑1 (MQ=255)
aTTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCg > 2:2495479/1‑101 (MQ=255)
ttCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGAt < 2:517869/101‑1 (MQ=255)
tCCCGGCAAGGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATc < 1:179638/101‑1 (MQ=255)
tCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGGGGCGGCACGGCGCGGCGCACCTTCGGGTCGGGCGGGGCCCTCAGCTCCTCTTCCCCGTGTTCGATc > 2:4153996/1‑101 (MQ=255)
tCCCGGCAAAGGGGC.TTGGCCCCCCCCCGAAGGGCGGCGGGACGAAGCGGCGAACCTGCGGTTCGGGGGGCGCCCTCAACTCTTCTTCCCCGTGTTCGGTc > 2:4172801/1‑101 (MQ=255)
cccGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCa < 1:1017917/101‑1 (MQ=255)
ggCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGcc < 2:1295816/101‑1 (MQ=255)
aaaGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGGTCGATCAGCCGcc > 2:4718979/1‑100 (MQ=255)
aaGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCAc < 2:4094851/101‑1 (MQ=255)
aGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCAcc < 1:2917362/101‑1 (MQ=255)
ggggC.TTGGCCCCGCCTCGAAGGGGGGCGGCACGACGCGGCGCACCTTCGGTTCGGGGGGCGCCATCAGCTCTTCTTCCTCCTGTTTGGTCAGCCCCAccc > 2:3827170/1‑100 (MQ=255)
gggC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACcgc < 2:1704310/101‑1 (MQ=255)
gggC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACcgc > 2:430480/1‑101 (MQ=255)
ggC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACcgcg > 1:1813445/1‑101 (MQ=255)
c.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACcgcgcg > 2:1625230/1‑101 (MQ=255)
c.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACcgcgcg > 2:3403429/1‑101 (MQ=255)
c.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACcgcgcg > 1:3895579/1‑101 (MQ=255)
|
AGACCGCCGCCACTGCCGGGCAGCGGATCATAGGCCGGGGAATCGATCCGGTCGAGCGGCGCGCGCGGCCCGCTGGGCGCCGATTTCCCGGCAAAGGGGC.TTGGCCCCGCCTCGAAGGGCGGCGGCACGACGCGGCGCACCTTCGGTTCGGGCGGCGCCATCAGCTCTTCTTCCTCGTGTTCGATCAGCCGCACCGCGCG > NC_014034/2780311‑2780510
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|