| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,876,574 | +A | 2.5% | intergenic (+73/‑120) | RCAP_rcc02685 → / → prfA | glutathione S‑transferase/peptide chain release factor 1 |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,876,574 | 1 | .→A | 2.5% | 5.0 ‑2.7 ‑0.2 | 122 | intergenic (+73/‑120) | RCAP_rcc02685/prfA | glutathione S‑transferase/peptide chain release factor 1 |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (48/71): total (51/71) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.05e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.55e-01 | ||||||||||
Only 100 of 136 total aligned reads displayed.
GGAAAGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCG > NC_014034/2876474‑2876674
|
gAAAGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.c > 2:4962720/1‑101 (MQ=255)
gAAAGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.c < 2:2246563/101‑1 (MQ=255)
aaaGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.cc < 1:4623453/101‑1 (MQ=255)
aaaGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.cc > 1:3502451/1‑101 (MQ=255)
aggcgcgCTGCCGCACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATTCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCg < 1:726308/98‑1 (MQ=255)
aGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCg < 1:22735/101‑1 (MQ=255)
aGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCACCGGTTCAAG.CCCg > 1:2486467/1‑101 (MQ=255)
aCGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGAt < 2:1136121/101‑1 (MQ=255)
ttccgatctaaCCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATgg < 2:145940/92‑1 (MQ=255)
gcgcTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATgg < 1:2537644/101‑1 (MQ=255)
cgcTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGga < 2:2823718/101‑1 (MQ=255)
gcTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATGCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgac < 2:816876/101‑1 (MQ=255)
gcTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgac < 2:4793655/101‑1 (MQ=255)
gcTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgac > 1:1693607/1‑101 (MQ=255)
cTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgacg < 1:1042112/101‑1 (MQ=255)
tGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgacga < 1:698562/101‑1 (MQ=255)
gCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgacgac < 2:2567739/101‑1 (MQ=255)
gCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgacgac < 1:610773/101‑1 (MQ=255)
ccGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGacgacg > 2:3372373/1‑101 (MQ=255)
gAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACggg > 1:8309/1‑101 (MQ=255)
aaCCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGgagatcggaa > 1:145956/1‑93 (MQ=255)
aaCCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACgggg > 2:3970660/1‑101 (MQ=255)
ccGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCa > 1:2976797/1‑101 (MQ=255)
ccGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCa < 2:2757750/101‑1 (MQ=255)
ccGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCa > 1:2994682/1‑101 (MQ=255)
ggCGTGATCCGCCGCGCCCCCCTGCTTTTTCTTGGGGAAAATCCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.gc < 1:1399519/101‑1 (MQ=255)
ggCGTGATCCGCCGCGCCCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.gc < 1:1789580/101‑1 (MQ=255)
ttggtCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGcc < 2:3548867/97‑1 (MQ=255)
gTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCC.GCGcc > 2:751770/1‑101 (MQ=255)
gTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGcc > 2:5047844/1‑101 (MQ=255)
gTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGcc < 1:114099/101‑1 (MQ=255)
tGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGccc < 2:8301/101‑1 (MQ=255)
gATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGcccc < 1:3970952/101‑1 (MQ=255)
ccgccgCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCcccgc < 1:4293907/101‑1 (MQ=255)
cgccgcGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCcccgcc < 1:2248369/101‑1 (MQ=255)
gccgcGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCcccgccc < 1:1017603/101‑1 (MQ=255)
gccgcGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCccccccc > 1:229068/1‑101 (MQ=255)
ccgcGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCcccgcccg < 1:467866/101‑1 (MQ=255)
cgcgcgCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCgg < 1:4963050/101‑1 (MQ=255)
cgcCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCGGGGCg > 1:3408047/1‑101 (MQ=255)
ccccTGCTTTTTCTTGGGGAAAATGCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.cc < 2:3864156/101‑1 (MQ=255)
ccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.cccc < 2:294346/101‑1 (MQ=255)
ccTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.cccc > 1:3484533/1‑101 (MQ=255)
cTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCAGTTCAAG.CCCGATGAACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.g < 2:3307888/101‑1 (MQ=255)
gCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.ggg < 1:4667552/101‑1 (MQ=255)
gCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCCGGGCG.CCCC.ggg > 2:4065016/1‑101 (MQ=255)
tttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCCGGGCG.CCCC.GGgcg > 1:1423016/1‑101 (MQ=255)
ttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCCGGGCG.CCCC.CGgggc > 2:4339639/1‑101 (MQ=25)
ttttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.GGgcgc > 1:1719753/1‑101 (MQ=255)
tttCTTGGGGAAAATGCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.a < 2:3539406/101‑1 (MQ=255)
tttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.gcccacggggc > 2:3411131/1‑94 (MQ=37)
ttCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGGC.CCCC.CGgcgccg > 1:3124730/1‑99 (MQ=25)
tCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.c < 2:4855464/101‑1 (MQ=255)
tCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.c > 1:515402/1‑101 (MQ=255)
tGGGGAAAATACGCGGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.cccc < 2:400296/101‑1 (MQ=255)
tGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCCGGGCG.CCCC.GGGCGC.CG.cccc > 1:832551/1‑101 (MQ=255)
tGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCGGGGCG.CCCC.GGGCGC.AG.cccc > 2:1616680/1‑101 (MQ=255)
gggAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCgg < 1:274831/101‑1 (MQ=255)
ggAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGGCC.GCCC.GGGCGCAAG.CCCCgg > 2:2180986/1‑101 (MQ=25)
gAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCGGGGCG.CCCC.GGGGGC.AG.CCCCcggg > 1:623575/1‑101 (MQ=37)
gAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.CGGCGC.CG.CCCCcggg > 2:3838357/1‑101 (MQ=37)
aaaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGc < 2:1405471/101‑1 (MQ=255)
aaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCg < 2:3502181/101‑1 (MQ=255)
aaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCg < 1:446380/101‑1 (MQ=255)
aaaTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCC.CCCC.CCGGGC.CG.CCCCGGGGCg > 1:3114414/1‑101 (MQ=21)
tatcccggggggTCGTCCATTGGGGCACCATCGGCTCAAGACCCGATGGACGAC.GGGCG.GAGCCCCCGGCGGGGGGG.CCCC.GGGGGA.CG.CCCCCGGGGGaa > 1:952668/8‑101 (MQ=21)
aTACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCGGGGCG.CCCC.CGGCGC.AC.CCCCCGGGCgca > 1:4015300/1‑99 (MQ=25)
aCGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAAt < 1:2983710/101‑1 (MQ=255)
cGCCGGCGGTCGTCCATTGCGGCGACATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATc < 2:2372725/101‑1 (MQ=255)
gCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATcc < 2:931253/101‑1 (MQ=255)
ccGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccc < 2:2962760/101‑1 (MQ=255)
ccGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccc < 2:2832016/101‑1 (MQ=255)
ccGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGGCG.CCCC.GGGCGC.AG.CCCCGGGGCGGAATccc > 1:615411/1‑101 (MQ=255)
ccGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.CGGCGC.CG.CCCCCGGGCGGAAAccc > 2:4532707/1‑101 (MQ=25)
gggggTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.CGGCGC.CGCCCCCGGGGGGAAACcccc > 1:3830460/1‑101 (MQ=21)
gggggTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCCGGCT.CCCCGGGGGGC.GG.CCCCGGGGGGAAACcccc > 2:4295743/1‑101 (MQ=21)
gggTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgcc < 1:565260/101‑1 (MQ=255)
gggGCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgcc < 2:3960048/101‑1 (MQ=255)
gtcgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgccca < 2:3558587/101‑1 (MQ=255)
gtcgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgccca < 2:1007812/101‑1 (MQ=255)
tcgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgcccac < 2:515323/101‑1 (MQ=255)
tcgtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgcccac < 2:2994454/101‑1 (MQ=255)
cgccgagcgcggcgCCATCGGTTCAAG.CCGGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgcccacc < 2:92721/93‑1 (MQ=255)
gtcCATTGGGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATccccgcccaccc < 1:935206/101‑1 (MQ=255)
gtcCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCCGGGCGGAAAccccgccccccc > 2:4986054/1‑101 (MQ=37)
cATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.CGGCGC.CGCCCCCGGGGGGAAACcccccccccccccc > 1:3831407/1‑101 (MQ=255)
aTTGGGGCACCATCGGCTCAAGACCCGATGGACGAC.GGGCG.GAGCCCCCG.GCGGGTCGCCCCC.GGGGGC.CN.CCNNCGGGGGAAACcccagcaccccccaca > 1:3477126/1‑98 (MQ=19)
tGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGGCG.CCCC.CGGCGC.CG.CCCCCGGGGGGAAAcccccccccccccccccc > 2:2731055/1‑101 (MQ=25)
cgcCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCt < 2:3484268/101‑1 (MQ=255)
gcCATCGGTTCAAG.CCCGATGGACGACGGGGCACCCCCCCCCCCCCGGGCCC.CCCC.GCGCCC.AC.CCCGGGGGGGACACCACACCCAACCCCCCCCCCCCCt > 1:2052488/1‑101 (MQ=255)
gcCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCtt < 1:4827413/101‑1 (MQ=255)
ccATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.CGGCGC.AA.CCCCCGGGCGGAAACCCCCCCCACCCCCCCCCCCCCCTg > 2:2191757/1‑101 (MQ=255)
ccATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCACCCCCGCCCCGGTGG.GCCC.GGCCGC.AA.CCCCGGGGGCAAATcccccgacccccccgcgccgcctgg > 2:5038999/1‑92 (MQ=255)
cATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCCCCCCGGGCG.CCCC.CGGCGC.CGCCCCCGGGGGGAAACCCCCCCCCCCCCCCCCCCCCCCttc > 2:1034121/1‑100 (MQ=255)
cATCGGTTCAAG.CCCGATGGAAGACGGGGCA.GCGCCCCCCCCCGGGGCG.CCCC.GGGCGC.CG.CCCCGGGGGGGAAACCccgcccacccccccccccccctta > 1:2872600/1‑97 (MQ=255)
tCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGAcc < 2:1719623/101‑1 (MQ=255)
gTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGACCCag < 1:2088226/101‑1 (MQ=255)
aaG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGACCCAGAGcc < 2:2052344/101‑1 (MQ=255)
aG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGACCCAGAGccc < 2:3863284/101‑1 (MQ=255)
g.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCg < 1:3429316/101‑1 (MQ=255)
|
GGAAAGACGCGCTGCCGAACCGGCGTGATCCGCCGCGCGCCCCTGCTTTTTCTTGGGGAAAATACGCCGGGGGTCGTCCATTGCGGCGCCATCGGTTCAAG.CCCGATGGACGACGGGGCA.GCGCCCCCGCCCGGGTCG.CCCC.GGGCGC.AG.CCCCGGGGCGAAATCCCCGCCCACCCCCGCCCACCCTTGACCCAGAGCCCG > NC_014034/2876474‑2876674
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|